3b5q Evolution: Difference between revisions

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[http://www.ncbi.nlm.nih.gov/pubmed/2303452?dopt=Abstract Sequence homology of arylsulfatases]
== Sequence Homology==
== Sequence Homology==
Multiple sequence alignment (MSA)
Multiple sequence alignment (MSA)


[[Image:MSA11.jpg|700px|thumb]]
[[BLASTP results| Proteins, Organism names & Sequences]]


[[Image:clustalx1a.jpg|800px|thumb|'''Figure 1.1'''<Br> Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX]]<Br>


[[Image:MSA2.jpg|700px|thumb]]
[[Image:clustalx2.jpg|800px|thumb|'''Figure 1.2'''<Br> Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX]]<Br>


[[Image:clustalx3a.jpg|800px|thumb|'''Figure 1.3'''<Br> Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX]]<Br>


[[Image:MSA3.jpg|700px|thumb]]
[[Image:clustalx4a.jpg|800px|thumb|'''Figure 1.4'''<Br> Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX]]<Br>


[[Image:clustalx5a.jpg|800px|thumb|'''Figure 1.5'''<Br> Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX]]<Br>


[[Image:MSA4.jpg|700px|thumb]]
[[Image:clustalx6a.jpg|800px|thumb|'''Figure 1.6'''<Br> Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX]]<Br>




[[Image:MSA5.jpg|700px|thumb]]




[[Image:MSA6.jpg|700px|thumb]]




[[Image:MSA7.jpg|700px|thumb]]




[[Image:MSA8.jpg|800px|thumb| Figure 1: Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K ]]




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== Evolutionary Tree==






[[Image:treeA.jpg|right|thumb|800px|'''Figure 2'''<Br>Evolutionary tree of proteins showing sequence homology with arylsulfatase K using Treeview, red represents eukaryotes and blue represents bacteria]]<Br>




[[Image:bootstrap tree_final.jpg|right|thumb|800px|'''Figure 3'''<Br>Phylogeny rooted tree showing bootstrap values using MEGA4]]<Br>




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[http://www.ncbi.nlm.nih.gov/pubmed/2303452?dopt=Abstract Sequence homology of arylsulfatases]
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
== Evolutionary Tree==
 
[[Image:tree3.png|right|thumb|800px|Figure 2: Evolutionary tree of proteins showing sequence homology with arylsulfatase K]]
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 




Click here to go [http://compbio.chemistry.uq.edu.au/mediawiki/index.php/Arylsulfatase_K ''Back'']
Click here to go [http://compbio.chemistry.uq.edu.au/mediawiki/index.php/Arylsulfatase_K ''Back'']

Latest revision as of 23:28, 9 June 2008

Sequence Homology

Multiple sequence alignment (MSA)

Proteins, Organism names & Sequences

Figure 1.1
Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX


Figure 1.2
Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX


Figure 1.3
Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX


Figure 1.4
Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX


Figure 1.5
Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX


Figure 1.6
Multiple sequence alignment (MSA) of proteins showing sequence homology to arylsulfatse K obtained from ClustalX






































Evolutionary Tree

Figure 2
Evolutionary tree of proteins showing sequence homology with arylsulfatase K using Treeview, red represents eukaryotes and blue represents bacteria



Figure 3
Phylogeny rooted tree showing bootstrap values using MEGA4
























Sequence homology of arylsulfatases


Click here to go Back

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