Gaf Domain on C-Terminal: Difference between revisions

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<pre>
  USR1:_(size=344) vs USR2:A(size=180)
  USR1:_(size=344) vs USR2:A(size=180)
Structure Alignment Rmsd = 3.3Å Z-Score = 4.4
Structure Alignment Rmsd = 3.3Å Z-Score = 4.4
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View of structure alignment using Protein Explorer
View of structure alignment using Protein Explorer
</pre>

Latest revision as of 06:32, 15 May 2007

 USR1:_(size=344) vs USR2:A(size=180)
Structure Alignment	Rmsd = 3.3Å Z-Score = 4.4
Sequence identity = 6.8%
Aligned/gap positions = 117/76
Sequence alignment based on structure alignment.
Sequence alignment based on structure alignment. Position numbers according to sequence (starting from 1) and according to PDB are given as SSSS/PPPP, SSSS - sequence, PPPP - PDB.
USR1:_ -
USR2:A - MOL_ID: 1; MOLECULE: GAF; CHAIN: A, B; ENGINEERED: YES





  USR1:_  162/163   TMLLAKFSFYFHEALSRQTTASEMKALTAKANPDLFGKISSFIRK--YDAANVSLIFDN-
  USR2:A   36/37    SDGQVNWVCNLS---------------------NASSLIWHAYKSLAVDINWAGFYVTQA


  USR1:_  219/220   -RGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVMHW----PNVIMIMTDRASD
  USR2:A   75/76    SEEN----------------------TLILGPFQGKVACQ--MIQFGKGVCGTAASTK--


  USR1:_  274/275   LNSLEKVVHFYDDKV----------QSTYFLTRPEP-----HFTIVVIFESKKSERDSHF
  USR2:A  109/110   -----ETQIVPDVNKYPGHIACDGETKSEIVVPIISNDGKTLGVIDIDCLDYEGFDHV-D


  USR1:_  319/320   ISFLNELSLALKN
  USR2:A  163/164   KEFLEKLAKLINK

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View of structure alignment using Protein Explorer