Structural analysis of 2qgn: Difference between revisions
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'''Dali Output''' | '''Dali Output''' | ||
PDB entry code for 2qgn was loaded onto DALI to search for structurally similar neighbours. Displayed below | PDB entry code for 2qgn was loaded onto DALI to search for structurally similar neighbours. Displayed below are the results from DALI search :- | ||
[[Image:Dali output.jpg|framed|none]] | [[Image:Dali output.jpg|framed|none]] |
Revision as of 11:07, 30 May 2008
Protein Sequence in FASTA format
>gi|152149497|pdb|2QGN|A Chain A, Crystal Structure Of Trna Isopentenylpyrophosphate Transferase (Bh2366) From Bacillus Halodurans, Northeast Structural Genomics Consortium Target Bhr41. XKEKLVAIVGPTAVGKTKTSVXLAKRLNGEVISGDSXQVYRGXDIGTAKITAEEXDGVPHHLIDIKDPSE SFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRADEDYRHELEAFVNSYGVQALH DKLSKIDPKAAAAIHPNNYRRVIRALEIIKLTGKTVTEQARHEEETPSPYNLVXIGLTXERDVLYDRINR RVDQXVEEGLIDEAKKLYDRGIRDCQSVQAIGYKEXYDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFRN KANVTWFDXTDVDFDKKIXEIHNFIAGKLEEKSKLEHHHHHH
Structure of Protein
Structural Analysis
Analysis of the secondary structure acquired from Protein Data Bank showed results as displayed below :
Surface Properties of 2qgn
Ligand Binding Sites and Surface Clefts
Structural Alignment
Dali Output
PDB entry code for 2qgn was loaded onto DALI to search for structurally similar neighbours. Displayed below are the results from DALI search :-