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| == Materials & Methods==
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| 1) Protein structural search on PyMOL, NCBI Entrez, InterPro and PDB databases | | 1) Protein structural search on PyMOL, NCBI Entrez, InterPro and PDB databases |
| * PDB code: 3b5q | | * PDB code: 3b5q |
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| '''PDB''' | | '''PDB''' |
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| [[Image:3b5q image PDB.png|thumb|'''Figure 1.0''' Structure of 3b5q]] | | [[Image:3b5q image PDB.png]] |
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| | '''Figure 1.0''' Structure of 3b5q |
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| '''Sequence'''
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| >gi|160286517|pdb|3B5Q|A Chain A, Crystal Structure Of A Putative Sulfatase (Np_810509.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.40 A Resolution
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| GXGLALCGAAAQAQEKPNFLIIQCDHLTQRVVGAYGQTQGCTLPIDEVASRGVIFSNAYVGCPLSQPSRA
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| ALWSGXXPHQTNVRSNSSEPVNTRLPENVPTLGSLFSESGYEAVHFGKTHDXGSLRGFKHKEPVAKPFTD
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| PEFPVNNDSFLDVGTCEDAVAYLSNPPKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNF
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| DVEDWSNIPTPVQYICCSHRRXTQAAHWNEENYRHYIAAFQHYTKXVSKQVDSVLKALYSTPAGRNTIVV
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| IXADHGDGXASHRXVTKHISFYDEXTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPTLCDLAGIAVPAE
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| KAGISLAPTLRGEKQKKSHPYVVSEWHSEYEYVTTPGRXVRGPRYKYTHYLEGNGEELYDXKKDPGERKN
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| LAKDPKYSKILAEHRALLDDYITRSKDDYRSLKVDADPRCRNHTPGYPSHEGPGAREILKRK
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| == Links ==
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| [http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=160286517 Arylsulfatase sequence]
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| [http://www.ncbi.nlm.nih.gov/pubmed/17558559?ordinalpos=2&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum Human sulfatases: a structural perspective to catalysis]
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| [http://www.ncbi.nlm.nih.gov/pubmed/10212197?ordinalpos=1&itool=EntrezSystem2.PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_DiscoveryPanel.Pubmed_Discovery_RA&linkpos=4&log$=relatedarticles&logdbfrom=pubmed Amino acid residues forming the active site of arylsulfatase A. Role in catalytic activity and substrate binding]
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| [http://www.rcsb.org/pdb/explore/explore.do?structureId=3b5q Protein structure in PDB]
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| | == Crystal Structure == |
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| '''Crystal Structure'''
| | [[Image:protein showing zinc pymol.png]] |
| [[Image:protein showing zinc pymol.png|700px|thumb]] | |
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Latest revision as of 05:39, 5 June 2008
1) Protein structural search on PyMOL, NCBI Entrez, InterPro and PDB databases
2) Comparing protein search with DALI server to identify similiar structures
Results
PDB
Figure 1.0 Structure of 3b5q
Discussion
Crystal Structure
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