Material and Method of SNAPG: Difference between revisions
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== '''Identifying Protein Function Analysis''' == | == '''Identifying Protein Function Analysis''' == | ||
The Fasta format file of N-ethylmaleide-sensitive factor attachment protein, gamma (SNAPG) was first obtained from BLAST. Several internet databases and software were used to obtain all important data and information of SNAPG including ProFunc, ProKnow, GO, STRING, LOCATE, PDB, Scorecons and Pymol. The PDB file code of SNAPG is 2ifuA which was derived from ''Danio renio''. All of the data and useful information were accumulated and compared each other to give the function prediction of SNAPG. Comparisons of structure similarity and conserved residue domain sequence alignments were obtained by submitting the Fasta format into ProFunc and ProKnow; which are the primary approaches for SNAPG analysis. Protein-protein interaction data from STRING were collected to give additional approach on predicting function. Further | |||
Revision as of 23:10, 9 June 2007
Identifying Structural Protein
Identifying Protein Function Analysis
The Fasta format file of N-ethylmaleide-sensitive factor attachment protein, gamma (SNAPG) was first obtained from BLAST. Several internet databases and software were used to obtain all important data and information of SNAPG including ProFunc, ProKnow, GO, STRING, LOCATE, PDB, Scorecons and Pymol. The PDB file code of SNAPG is 2ifuA which was derived from Danio renio. All of the data and useful information were accumulated and compared each other to give the function prediction of SNAPG. Comparisons of structure similarity and conserved residue domain sequence alignments were obtained by submitting the Fasta format into ProFunc and ProKnow; which are the primary approaches for SNAPG analysis. Protein-protein interaction data from STRING were collected to give additional approach on predicting function. Further
Identifying Evolutionary Protein
Back to Scientific Report of N-ethylmaleide-sensitive factor attachment protein, gamma