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| Block Searcher Results
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| Go to hits
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| Introduction
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| BLKPROB Version 12/23/06.1
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| Database=../data-blplus-minus/blocks.dat
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| ___________ ___________ ___________
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| | | * BLOCKS | | WWW | |SEARCHER * | |
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| | | **********| |***********| |********** | |
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| \|___________|___________|___________|___________|___________|/
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| |\ __________\ /__________ /|
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| | | | | http:// | |
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| | | | | blocks. | |
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| | | | | fhcrc. | |
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| | | | | org | |
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| \|___________| |___________|/
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| Here are your search results. The database searched was BLOCKS 14.3 (Apr 2007)
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| consisting of 27,288 blocks representing 5635 nonredundant entries documented
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| in InterPro 14.0 keyed to Swiss-Prot 51.3 and TrEMBL 34.3.
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| If you found the Blocks Searcher useful, please cite:
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| S Henikoff & JG Henikoff, "Protein family classification
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| based on searching a database of blocks", Genomics 19:97-107 (1994).
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| Please report problems at: http://blocks.fhcrc.org/contact.html
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| ==============================================================================
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| Each numbered result consists of one or more blocks from a Prosite group found
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| in the query sequence. One set of the highest-scoring blocks that are in the
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| correct order and separated by distances comparable to the Blocks database is
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| selected for analysis. If this set includes multiple blocks the probability
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| that the lower scoring blocks support the highest scoring block is reported.
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| Maps of the database blocks and query sequence are shown:
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| AAA represents the first block roughly in proportion to its width.
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| : represents the minimum distance between blocks in the database.
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| . represents the maximum distance between blocks in the database.
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| < > indicate the sequence has been truncated to fit the page.
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| The query map is aligned on the highest scoring block. Multiple block hits
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| that are consistent with the highest scoring block are separated by colons.
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| Block hits that are not consistent are mapped below. The alignment of the
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| query sequence with the sequence closest to it in the BLOCKS database is
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| shown. The distance between detected blocks is listed as (min, max): for the
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| database entry followed by the distance in the query. Upper case in the query
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| indicates at least one occurrence of the residue in that column of the block.
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| For interpretation of block hits, you might find it worthwhile to obtain the
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| full set of blocks and documentation for a group. To do this, send a blank
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| message to blocks@blocks.fhcrc.org with the subject heading: GET BL????? e.g.,
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| 'Subject: GET BL00044' (0s are zeros) for full information on this group.
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| =============================================================================
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| Note: For searches using DNA queries, "Location" refers to the position
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| in the query in base pairs from 5' to 3' on the + strand, whereas the map and
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| alignment show the translated position in amino acid residues as before.
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| =============================================================================
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| [Return to top]
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| Hits
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| Query=Unknown Unknown
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| Size=441 Amino Acids
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| Blocks Searched=27288
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| Alignments Done= 12745007
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| Cutoff combined expected value for hits= 1
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| Cutoff block expected value for repeats/other= 1
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| ==============================================================================
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| Combined
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| Family Strand Blocks E-value
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| IPB001944 Glycoside hydrolase, family 35 1 1 of 8 0.052
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| ==============================================================================
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| >IPB001944 1/8 blocks Combined E-value= 0.052: Glycoside hydrolase, family 35
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| Block Frame Location (aa) Block E-value
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| IPB001944A 0 23-77 0.049
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| Other reported alignments:
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| |--- 599 amino acids---|
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| IPB001944 AAB..C::::...D.E:.............F............G................H
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| Unknown AA
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| IPB001944A <->A (-28,146):22
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| Q4WG05|Q4WG05_ASPFU53 GERLMIFSGEFHPFRLPVPGLWFDVFQKIKSLGFNAVSFYTDWGLMEGNPGHVVT
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| Unknown 23 iwRGKYFSSGnePaenPVTPMlRHLMYKIKSTGpiTVAeYmkevLtNPAKGYYVY
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| ------------------------------------------------------------------------------
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| 1 possible hits reported
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| [Return to top] [Blocks Home]
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