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| Mouse Protein Subcellular Localization Database
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| BLAST Results
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| BLASTP 2.2.12 [Aug-07-2005] | | BLASTP 2.2.12 [Aug-07-2005] |
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Line 24: |
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| Score E | | Score E |
| Sequences producing significant alignments: (bits) Value SCL Data Protein Class | | Sequences producing significant alignments: (bits) Valu SCL Data Protein Class |
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| PA157757.1|Unknown (protein for MGC:86070)\ 597 e-171 P Soluble, non-secreted protein | | PA157757.1|Unknown (protein for MGC:86070)\ 597 e-171 P Soluble, non-secreted protein |
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| PA177473.19|RalGDS-like factor\ 29 5.3 OP Soluble, non-secreted protein | | PA177473.19|RalGDS-like factor\ 29 5.3 OP Soluble, non-secreted protein |
| PA82764.1|YY1 transcription factor\ 29 5.3 LOP Soluble, non-secreted protein | | PA82764.1|YY1 transcription factor\ 29 5.3 LOP Soluble, non-secreted protein |
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| >PA157757.1|Unknown (protein for MGC:86070)\
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| Length = 445
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| Score = 597 bits (1538), Expect = e-171
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| Identities = 299/323 (92%), Positives = 299/323 (92%)
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| Query: 1 PHLSEQLCFFVQARXEIADFYEKXYALSTQKFINTEELVSTLDTILRKYSSRFHHPILSP 60
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| PHLSEQLCFFVQAR EIADFYEK YALSTQKFINTEELVSTLDTILRKYSSRFHHPILSP
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| Sbjct: 123 PHLSEQLCFFVQARMEIADFYEKMYALSTQKFINTEELVSTLDTILRKYSSRFHHPILSP 182
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| Query: 61 LESSFQLEVGVLSHLLKAQAQISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFG 120
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| LESSFQLEVGVLSHLLKAQAQISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFG
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| Sbjct: 183 LESSFQLEVGVLSHLLKAQAQISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFG 242
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| Query: 121 GQSQKAVQPPHXXXXXXXXXXXXXXXXXXYFHEALSRQTTASEXKALTAKANPDLFGKIS 180
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| GQSQKAVQPPH YFHEALSRQTTASE KALTAKANPDLFGKIS
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| Sbjct: 243 GQSQKAVQPPHLFLWLMKLKTMLLAKFSFYFHEALSRQTTASEMKALTAKANPDLFGKIS 302
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| Query: 181 SFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVXHWP 240
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| SFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPV HWP
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| Sbjct: 303 SFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVMHWP 362
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| Query: 241 NVIXIXTDRASDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFISF 300
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| NVI I TDRASDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFISF
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| Sbjct: 363 NVIMIMTDRASDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFISF 422
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| Query: 301 LNELSLALKNPKVFASLKPGSKG 323
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| LNELSLALKNPKVFASLKPGSKG
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| Sbjct: 423 LNELSLALKNPKVFASLKPGSKG 445
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| >PA157757.12|hypothetical protein\
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| Length = 430
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| Score = 551 bits (1419), Expect = e-157
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| Identities = 275/299 (91%), Positives = 275/299 (91%)
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| Query: 1 PHLSEQLCFFVQARXEIADFYEKXYALSTQKFINTEELVSTLDTILRKYSSRFHHPILSP 60
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| PHLSEQLCFFVQAR EIADFYEK YALSTQKFINTEELVSTLDTILRKYSSRFHHPILSP
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| Sbjct: 123 PHLSEQLCFFVQARMEIADFYEKMYALSTQKFINTEELVSTLDTILRKYSSRFHHPILSP 182
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| Query: 61 LESSFQLEVGVLSHLLKAQAQISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFG 120
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| LESSFQLEVGVLSHLLKAQAQISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFG
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| Sbjct: 183 LESSFQLEVGVLSHLLKAQAQISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFG 242
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| Query: 121 GQSQKAVQPPHXXXXXXXXXXXXXXXXXXYFHEALSRQTTASEXKALTAKANPDLFGKIS 180
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| GQSQKAVQPPH YFHEALSRQTTASE KALTAKANPDLFGKIS
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| Sbjct: 243 GQSQKAVQPPHLFLWLMKLKTMLLAKFSFYFHEALSRQTTASEMKALTAKANPDLFGKIS 302
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| Query: 181 SFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVXHWP 240
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| SFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPV HWP
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| Sbjct: 303 SFIRKYDAANVSLIFDNRGSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVMHWP 362
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| Query: 241 NVIXIXTDRASDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFIS 299
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| NVI I TDRASDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFIS
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| Sbjct: 363 NVIMIVTDRASDLNSLEKVVHFYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFIS 421
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| >PA157757.2|hypothetical protein\
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| Length = 261
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| Score = 230 bits (586), Expect = 1e-60
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| Identities = 116/135 (85%), Positives = 116/135 (85%)
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| Query: 21 YEKXYALSTQKFINTEELVSTLDTILRKYSSRFHHPILSPLESSFQLEVGVLSHLLKAQA 80
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| YEK YALSTQKFINTEELVSTLDTILRKYSSRFHHPILSPLESSFQLEVGVLSHLLKAQA
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| Sbjct: 87 YEKMYALSTQKFINTEELVSTLDTILRKYSSRFHHPILSPLESSFQLEVGVLSHLLKAQA 146
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| Query: 81 QISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFGGQSQKAVQPPHXXXXXXXXX 140
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| QISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFGGQSQKAVQPPH
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| Sbjct: 147 QISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRETKKHLFGGQSQKAVQPPHLFLWLMKLK 206
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| Query: 141 XXXXXXXXXYFHEAL 155
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| YFHEAL
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| Sbjct: 207 TMLLAKFSFYFHEAL 221
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| >PA72427.1|neuronal apoptosis inhibitory protein\
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| Length = 1447
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| Score = 29.6 bits (65), Expect = 3.1
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| Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
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| Query: 208 YHHPHSY---REAPKGVDQYPAVVS-LPSDRPVXHWPNVIXIXTDRASDLNSLEKVV--- 260
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| +H+ H + +E +D P V+S LP + P H + I T SDL+ L K++
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| Sbjct: 1139 FHNLHKFLGLKELCVRLDSKPDVLSVLPGEFPNLHHMEKLSIRTSTESDLSKLVKLIQNS 1198
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| Query: 261 ---HFYDDKVQSTYFLTRPEPHFTIVV----IFESKKSERDSHFISFLNEL 304
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| H + K FL+ EP T++ + E + S R ++F+N L
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| Sbjct: 1199 PNLHVFHLKCN---FLSNCEPLMTVLASCKKLREIEFSGRCFEAMTFVNIL 1246
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| >PA177473.19|RalGDS-like factor\
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| Length = 778
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| Score = 28.9 bits (63), Expect = 5.3
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| Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
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| Query: 50 SSRFHHPI-----LSPLESSFQLEVGVLS----HLLKAQAQISEWKFLPSLVTLHNAHT 99
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| +SR + P+ L P SS +L G L HLL A+ ++ F P+L+ H A T
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| Sbjct: 70 TSRQYRPLDPLAPLPPPRSSRRLRAGTLEALVRHLLDARTAGADMMFTPALLATHRAFT 128
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| >PA82764.1|YY1 transcription factor\
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| Length = 414
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| Score = 28.9 bits (63), Expect = 5.3
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| Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
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| Query: 199 GSESFQGHGYHHPHSYREAPKGVDQYPAVVSLPSDRPVXHWPNVIXIXT 247
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| G GH +HH H + P + P V P+ V H VI + T
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| Sbjct: 64 GGHGHAGHHHHHHHHHHHHPPMIALQPLVTDDPTQ--VHHHQEVILVQT 110
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| Database: RIKEN IPS7 Protein Sequences
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| Posted date: Jul 19, 2005 2:33 PM
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| Number of letters in database: 15,064,402
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| Number of sequences in database: 33,451
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| Lambda K H
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| 0.318 0.132 0.390
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| Gapped
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| Lambda K H
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| 0.267 0.0410 0.140
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| Matrix: BLOSUM62
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| Gap Penalties: Existence: 11, Extension: 1
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| Number of Hits to DB: 8,633,615
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| Number of Sequences: 33451
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| Number of extensions: 319325
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| Number of successful extensions: 769
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| Number of sequences better than 10.0: 6
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| Number of HSP's better than 10.0 without gapping: 3
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| Number of HSP's successfully gapped in prelim test: 3
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| Number of HSP's that attempted gapping in prelim test: 764
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| Number of HSP's gapped (non-prelim): 6
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| length of query: 323
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| length of database: 15,064,402
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| effective HSP length: 101
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| effective length of query: 222
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| effective length of database: 11,685,851
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| effective search space: 2594258922
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| effective search space used: 2594258922
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| T: 11
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| A: 40
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| X1: 16 ( 7.3 bits)
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| X2: 38 (14.6 bits)
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| X3: 64 (24.7 bits)
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| S1: 41 (21.7 bits)
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| S2: 61 (28.1 bits)
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BLASTP 2.2.12 [Aug-07-2005]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query=
(323 letters)
Database: RIKEN IPS7 Protein Sequences
33,451 sequences; 15,064,402 total letters
Searching..................................................done
E = has experimental SCL data
L = has literature-mined SCL data
O = has SCL data from external resources
P = has predicted SCL data
- denotes a protein that maps, with high-confidence, to a transcriptional unit that may exhibit variable membrane organization.
Score E
Sequences producing significant alignments: (bits) Valu SCL Data Protein Class
PA157757.1|Unknown (protein for MGC:86070)\ 597 e-171 P Soluble, non-secreted protein
PA157757.12|hypothetical protein\ 551 e-157 P Soluble, non-secreted protein
PA157757.2|hypothetical protein\ 230 1e-60 P Type II membrane protein
PA72427.1|neuronal apoptosis inhibitory protein\ 30 3.1 OP Soluble, non-secreted protein
PA177473.19|RalGDS-like factor\ 29 5.3 OP Soluble, non-secreted protein
PA82764.1|YY1 transcription factor\ 29 5.3 LOP Soluble, non-secreted protein
