2gnx BlastP: Difference between revisions

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[[Image:blastp.gif]]
[[Image:blastp.gif]]
Sequences producing significant alignments: 
             
| | | | Score (Bits) | E Value|
| ref|XP_001163972.1| PREDICTED: similar to FLJ32549 protein [Pan | 850 | 0.0 |
ref|XP_001116860.1|  PREDICTED: hypothetical protein isoform 1 [M  848    0.0    UniGene infoGene info
ref|NP_689653.3|  hypothetical protein LOC144577 [Homo sapiens...  847    0.0    UniGene infoGene info
gb|AAH36246.1|  FLJ32549 protein [Homo sapiens]                    846    0.0    Gene info
ref|XP_001116875.1|  PREDICTED: hypothetical protein isoform 3 [M  843    0.0    UniGene infoGene info
ref|XP_531657.2|  PREDICTED: hypothetical protein XP_531657 [Cani  827    0.0    UniGene infoGene info
ref|XP_615557.3|  PREDICTED: hypothetical protein [Bos taurus]      823    0.0    UniGene infoGene info
gb|EDL24424.1|  cDNA sequence BC048403, isoform CRA_a [Mus muscul  803    0.0 
ref|NP_766610.2|  hypothetical protein LOC270802 [Mus musculus...  803    0.0    UniGene infoGene info
ref|XP_576234.2|  PREDICTED: hypothetical protein [Rattus norv...  802    0.0    UniGene infoGene info
ref|XP_001364942.1|  PREDICTED: hypothetical protein [Monodelphis  797    0.0    Gene info
ref|XP_416063.1|  PREDICTED: hypothetical protein [Gallus gallus]  796    0.0    UniGene infoGene info
dbj|BAC39804.1|  unnamed protein product [Mus musculus]            760    0.0    UniGene infoGene info
ref|XP_001116868.1|  PREDICTED: hypothetical protein isoform 2 [M  743    0.0    UniGene infoGene info
ref|NP_001085035.1|  hypothetical protein LOC432102 [Xenopus l...  697    0.0    Gene info
ref|NP_001025261.1|  hypothetical protein LOC555715 [Danio rer...  665    0.0    UniGene infoGene info
ref|NP_001076454.1|  hypothetical protein LOC100005809 [Danio ...  661    0.0    UniGene infoGene info
ref|XP_001331282.1|  PREDICTED: hypothetical protein [Danio rerio  598    2e-169 UniGene infoGene info
emb|CAG12393.1|  unnamed protein product [Tetraodon nigroviridis]  593    8e-168
pdb|2GNX|A  Chain A, X-Ray Structure Of A Hypothetical Protein...  554    3e-156 Related structures
dbj|BAE41440.1|  unnamed protein product [Mus musculus]            508    2e-142 UniGene infoGene info
ref|NP_001038719.1|  hypothetical protein LOC692281 [Danio rer...  357    1e-96  UniGene infoGene info
ref|XP_624797.1|  PREDICTED: hypothetical protein [Apis mellifera  235    3e-60  UniGene infoGene info
ref|XP_974676.1|  PREDICTED: hypothetical protein [Tribolium cast  232    5e-59  Gene info
ref|XP_001193974.1|  PREDICTED: hypothetical protein [Strongyloce  208    5e-52  UniGene infoGene info
ref|XP_797380.2|  PREDICTED: hypothetical protein, partial [St...  207    2e-51  UniGene infoGene info
dbj|BAE37112.1|  unnamed protein product [Mus musculus] >dbj|B...  134    2e-29  UniGene info
gb|EDL24425.1|  cDNA sequence BC048403, isoform CRA_b [Mus muscul  132    6e-29
ref|XP_642387.1|  hypothetical protein DDBDRAFT_0205477 [Dicty...  87.8    1e-15  Gene info
emb|CAJ08583.1|  hypothetical protein, conserved [Leishmania majo  36.6    3.5

Revision as of 00:02, 11 June 2007

BLASTP 2.2.12 [Aug-07-2005] BLASTP 2.2.16 (Mar-25-2007)

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.

Reference: Schäffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.

RID: 6T33UXG4012


Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects

          5,035,888 sequences; 1,742,339,864 total letters

If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports

Query= Length=445

Blastp.gif


Sequences producing significant alignments:

| | | | Score (Bits) | E Value| | ref|XP_001163972.1| PREDICTED: similar to FLJ32549 protein [Pan | 850 | 0.0 |

ref|XP_001116860.1| PREDICTED: hypothetical protein isoform 1 [M 848 0.0 UniGene infoGene info ref|NP_689653.3| hypothetical protein LOC144577 [Homo sapiens... 847 0.0 UniGene infoGene info gb|AAH36246.1| FLJ32549 protein [Homo sapiens] 846 0.0 Gene info ref|XP_001116875.1| PREDICTED: hypothetical protein isoform 3 [M 843 0.0 UniGene infoGene info ref|XP_531657.2| PREDICTED: hypothetical protein XP_531657 [Cani 827 0.0 UniGene infoGene info ref|XP_615557.3| PREDICTED: hypothetical protein [Bos taurus] 823 0.0 UniGene infoGene info gb|EDL24424.1| cDNA sequence BC048403, isoform CRA_a [Mus muscul 803 0.0 ref|NP_766610.2| hypothetical protein LOC270802 [Mus musculus... 803 0.0 UniGene infoGene info ref|XP_576234.2| PREDICTED: hypothetical protein [Rattus norv... 802 0.0 UniGene infoGene info ref|XP_001364942.1| PREDICTED: hypothetical protein [Monodelphis 797 0.0 Gene info ref|XP_416063.1| PREDICTED: hypothetical protein [Gallus gallus] 796 0.0 UniGene infoGene info dbj|BAC39804.1| unnamed protein product [Mus musculus] 760 0.0 UniGene infoGene info ref|XP_001116868.1| PREDICTED: hypothetical protein isoform 2 [M 743 0.0 UniGene infoGene info ref|NP_001085035.1| hypothetical protein LOC432102 [Xenopus l... 697 0.0 Gene info ref|NP_001025261.1| hypothetical protein LOC555715 [Danio rer... 665 0.0 UniGene infoGene info ref|NP_001076454.1| hypothetical protein LOC100005809 [Danio ... 661 0.0 UniGene infoGene info ref|XP_001331282.1| PREDICTED: hypothetical protein [Danio rerio 598 2e-169 UniGene infoGene info emb|CAG12393.1| unnamed protein product [Tetraodon nigroviridis] 593 8e-168 pdb|2GNX|A Chain A, X-Ray Structure Of A Hypothetical Protein... 554 3e-156 Related structures dbj|BAE41440.1| unnamed protein product [Mus musculus] 508 2e-142 UniGene infoGene info ref|NP_001038719.1| hypothetical protein LOC692281 [Danio rer... 357 1e-96 UniGene infoGene info ref|XP_624797.1| PREDICTED: hypothetical protein [Apis mellifera 235 3e-60 UniGene infoGene info ref|XP_974676.1| PREDICTED: hypothetical protein [Tribolium cast 232 5e-59 Gene info ref|XP_001193974.1| PREDICTED: hypothetical protein [Strongyloce 208 5e-52 UniGene infoGene info ref|XP_797380.2| PREDICTED: hypothetical protein, partial [St... 207 2e-51 UniGene infoGene info dbj|BAE37112.1| unnamed protein product [Mus musculus] >dbj|B... 134 2e-29 UniGene info gb|EDL24425.1| cDNA sequence BC048403, isoform CRA_b [Mus muscul 132 6e-29 ref|XP_642387.1| hypothetical protein DDBDRAFT_0205477 [Dicty... 87.8 1e-15 Gene info emb|CAJ08583.1| hypothetical protein, conserved [Leishmania majo 36.6 3.5