|
|
| Line 1: |
Line 1: |
| BLASTP 2.2.16 [Mar-25-2007]
| |
|
| |
|
|
| |
| Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
| |
| Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
| |
| "Gapped BLAST and PSI-BLAST: a new generation of protein database search
| |
| programs", Nucleic Acids Res. 25:3389-3402.
| |
|
| |
| Query= gi|33358156|pdb|1PUJ|A Chain A, Structure Of B. Subtilis Ylqf
| |
| Gtpase
| |
| (282 letters)
| |
|
| |
| Database: nr
| |
| 4,878,246 sequences; 1,686,729,293 total letters
| |
|
| |
| Searching..................................................done
| |
|
| |
|
| |
|
| |
| Score E
| |
| Sequences producing significant alignments: (bits) Value
| |
|
| |
| ref|NP_389487.1| hypothetical protein BSU16050 [Bacillus subtili... 558 e-157
| |
| ref|YP_078998.1| GTP-binding domain protein [Bacillus lichenifor... 501 e-140
| |
| emb|CAD70603.1| hypothetical protein [Bacillus megaterium] 434 e-120
| |
| ref|YP_896211.1| GTPase family [Bacillus thuringiensis str. Al H... 429 e-119
| |
| ref|YP_085179.1| conserved hypothetical protein; GTPase family [... 429 e-119
| |
| ref|NP_833557.1| GTP-binding protein [Bacillus cereus ATCC 14579... 429 e-119
| |
| ref|YP_037899.1| conserved hypothetical protein, GTPase family [... 428 e-118
| |
| ref|NP_846218.1| GTPase family protein [Bacillus anthracis str. ... 428 e-118
| |
| ref|NP_980177.1| GTPase family protein [Bacillus cereus ATCC 109... 427 e-118
| |
| ref|YP_001125178.1| GTP-binding protein [Geobacillus thermodenit... 411 e-113
| |
| ref|YP_147057.1| hypothetical protein GK1204 [Geobacillus kausto... 409 e-112
| |
| ref|ZP_01171545.1| GTPase family protein [Bacillus sp. NRRL B-14... 391 e-107
| |
| ref|NP_243342.1| hypothetical protein BH2476 [Bacillus haloduran... 377 e-103
| |
| ref|ZP_01725897.1| ribosomal biogenesis GTPase [Bacillus sp. B14... 369 e-101
| |
| ref|YP_849486.1| GTPase family protein [Listeria welshimeri sero... 355 1e-096
| |
| ref|YP_013888.1| GTPase family protein [Listeria monocytogenes s... 355 1e-096
| |
| ref|NP_470647.1| hypothetical protein lin1311 [Listeria innocua ... 355 2e-096
| |
| ref|NP_464797.1| hypothetical protein lmo1272 [Listeria monocyto... 355 2e-096
| |
| ref|YP_175781.1| GTPase [Bacillus clausii KSM-K16] >gi|56910293|... 343 8e-093
| |
| ref|ZP_00540016.1| GTP-binding [Exiguobacterium sibiricum 255-15... 340 4e-092
| |
| ref|NP_692460.1| hypothetical protein OB1539 [Oceanobacillus ihe... 335 1e-090
| |
| ref|ZP_00241305.1| GTPase of unknown function [Bacillus cereus G... 332 1e-089
| |
| ref|YP_253585.1| hypothetical protein SH1670 [Staphylococcus hae... 330 5e-089
| |
| ref|NP_764476.1| hypothetical protein SE0921 [Staphylococcus epi... 327 3e-088
| |
| ref|YP_188393.1| GTP-binding protein, putative [Staphylococcus e... 326 8e-088
| |
| ref|NP_645943.1| hypothetical protein MW1126 [Staphylococcus aur... 324 4e-087
| |
| ref|YP_186118.1| GTP-binding protein, putative [Staphylococcus a... 321 2e-086
| |
| ref|NP_815362.1| GTPase of unknown function [Enterococcus faecal... 320 4e-086
| |
| ref|YP_416587.1| probable GTP-binding protein [Staphylococcus au... 320 5e-086
| |
| ref|YP_040630.1| putative GTPase protein [Staphylococcus aureus ... 320 5e-086
| |
| ref|ZP_00604104.1| GTP-binding protein [Enterococcus faecium DO]... 320 7e-086
| |
| ref|NP_371767.1| similar to GTP-binding protein [Staphylococcus ... 319 1e-085
| |
| ref|YP_301613.1| putative GTPase [Staphylococcus saprophyticus s... 315 1e-084
| |
| ref|YP_878280.1| GTP-binding protein, putative [Clostridium novy... 308 3e-082
| |
| ref|NP_562623.1| hypothetical protein CPE1707 [Clostridium perfr... 299 1e-079
| |
| ref|ZP_00912049.1| GTP-binding [Clostridium beijerincki NCIMB 80... 298 2e-079
| |
| ref|YP_001113390.1| GTP-binding protein, HSR1-related [Desulfoto... 298 2e-079
| |
| ref|YP_698994.1| GTPase of unknown function subfamily [Clostridi... 298 3e-079
| |
| ref|YP_696394.1| GTP-binding protein [Clostridium perfringens AT... 298 3e-079
| |
| ref|NP_348387.1| Predicted GTPase, YLQF B.subtilis ortholog [Clo... 297 5e-079
| |
| ref|ZP_00779663.1| GTP-binding [Thermoanaerobacter ethanolicus A... 296 8e-079
| |
| ref|ZP_01455389.1| GTP-binding [Thermoanaerobacter ethanolicus X... 295 1e-078
| |
| ref|YP_001037191.1| GTP-binding protein [Clostridium thermocellu... 294 4e-078
| |
| ref|NP_623074.1| predicted GTPase [Thermoanaerobacter tengcongen... 292 2e-077
| |
| ref|ZP_01575477.1| GTP-binding [Clostridium cellulolyticum H10] ... 291 2e-077
| |
| ref|YP_139375.1| GTP-binding protein [Streptococcus thermophilus... 291 2e-077
| |
| ref|YP_820340.1| Predicted GTPase [Streptococcus thermophilus LM... 291 2e-077
| |
| ref|ZP_01665615.1| GTP-binding protein, HSR1-related [Thermosinu... 290 5e-077
| |
| ref|YP_001128467.1| putative GTPase protein [Streptococcus pyoge... 290 6e-077
| |
| ref|YP_280324.1| GTP-binding protein [Streptococcus pyogenes MGA... 290 6e-077
| |
| ref|NP_607243.1| hypothetical protein spyM18_1121 [Streptococcus... 289 1e-076
| |
| ref|YP_060196.1| GTP-binding protein [Streptococcus pyogenes MGA... 288 2e-076
| |
| ref|NP_269311.1| hypothetical protein SPy1161 [Streptococcus pyo... 288 3e-076
| |
| ref|NP_664621.1| putative GTP-binding protein [Streptococcus pyo... 288 3e-076
| |
| ref|YP_598605.1| GTP-binding protein [Streptococcus pyogenes MGA... 287 4e-076
| |
| ref|NP_735497.1| hypothetical protein gbs1048 [Streptococcus aga... 285 1e-075
| |
| ref|ZP_01355053.1| GTP-binding [Clostridium phytofermentans ISDg... 285 3e-075
| |
| ref|NP_688024.1| GTP-binding protein [Streptococcus agalactiae 2... 285 3e-075
| |
| ref|NP_781884.1| GTP-binding protein [Clostridium tetani E88] >g... 284 3e-075
| |
| ref|YP_329729.1| GTP-binding protein [Streptococcus agalactiae A... 284 4e-075
| |
| ref|ZP_00784818.1| GTP-binding protein [Streptococcus agalactiae... 283 6e-075
| |
| ref|NP_358637.1| hypothetical protein spr1043 [Streptococcus pne... 282 1e-074
| |
| ref|NP_345624.1| GTP-binding protein [Streptococcus pneumoniae T... 282 1e-074
| |
| ref|ZP_00875787.1| GTP-binding [Streptococcus suis 89/1591] >gi|... 281 3e-074
| |
| ref|ZP_01361771.1| GTP-binding [Clostridium sp. OhILAs] >gi|1067... 279 1e-073
| |
| ref|NP_721388.1| putative GTP-binding protein [Streptococcus mut... 279 1e-073
| |
| ref|ZP_00800925.1| GTP-binding [Alkaliphilus metalliredigenes QY... 279 1e-073
| |
| ref|YP_001035144.1| GTP-binding protein, putative [Streptococcus... 273 6e-072
| |
| dbj|GAA00255.1| unnamed protein product [Pelotomaculum thermopro... 271 3e-071
| |
| ref|YP_809353.1| Predicted GTPase [Lactococcus lactis subsp. cre... 270 5e-071
| |
| ref|YP_001032488.1| hypothetical protein llmg_1175 [Lactococcus ... 269 1e-070
| |
| ref|NP_267450.1| GTP-binding protein [Lactococcus lactis subsp. ... 269 1e-070
| |
| ref|YP_395605.1| Putative GTP-binding protein [Lactobacillus sak... 269 1e-070
| |
| ref|YP_535610.1| GTP-binding protein [Lactobacillus salivarius s... 265 2e-069
| |
| ref|YP_806617.1| Predicted GTPase [Lactobacillus casei ATCC 334]... 265 2e-069
| |
| ref|YP_804470.1| Predicted GTPase [Pediococcus pentosaceus ATCC ... 265 2e-069
| |
| ref|YP_206469.1| GTP-binding protein [Vibrio fischeri ES114] >gi... 258 2e-067
| |
| ref|YP_518823.1| hypothetical protein DSY2590 [Desulfitobacteriu... 257 4e-067
| |
| ref|YP_001087752.1| putative GTPase [Clostridium difficile 630] ... 257 6e-067
| |
| ref|ZP_01635436.1| hypothetical protein CdifQ_03001396 [Clostrid... 256 7e-067
| |
| ref|ZP_01369602.1| GTP-binding [Desulfitobacterium hafniense DCB... 256 1e-066
| |
| ref|ZP_01217168.1| GTP-binding protein [Psychromonas sp. CNPT3] ... 255 2e-066
| |
| ref|YP_927868.1| GTP-binding protein [Shewanella amazonensis SB2... 254 3e-066
| |
| ref|YP_001093715.1| GTP-binding protein, HSR1-related [Shewanell... 252 1e-065
| |
| ref|YP_818246.1| Predicted GTPase [Leuconostoc mesenteroides sub... 252 1e-065
| |
| ref|NP_785403.1| GTPase [Lactobacillus plantarum WCFS1] >gi|2827... 251 3e-065
| |
| ref|ZP_01305969.1| putative GTPase YlqF [Oceanobacter sp. RED65]... 250 5e-065
| |
| ref|ZP_01274828.1| GTP-binding protein [Lactobacillus reuteri 10... 250 5e-065
| |
| ref|ZP_01616538.1| GTP-binding protein [marine gamma proteobacte... 250 7e-065
| |
| ref|YP_943783.1| GTP-binding protein, HSR1-related [Psychromonas... 250 7e-065
| |
| ref|ZP_01164246.1| GTP-binding protein [Lactobacillus reuteri JC... 249 1e-064
| |
| ref|NP_232919.1| hypothetical protein VCA0528 [Vibrio cholerae O... 249 2e-064
| |
| ref|ZP_01540298.1| GTP-binding [Shewanella woodyi ATCC 51908] >g... 248 2e-064
| |
| ref|NP_762057.1| Predicted GTPase [Vibrio vulnificus CMCP6] >gi|... 248 3e-064
| |
| ref|NP_936634.1| predicted GTPase [Vibrio vulnificus YJ016] >gi|... 248 3e-064
| |
| ref|YP_265263.1| putative GTP binding protein family [Psychrobac... 247 4e-064
| |
| ref|YP_963651.1| GTP-binding protein, HSR1-related [Shewanella s... 247 4e-064
| |
| ref|ZP_01436318.1| GTP-binding [Shewanella baltica OS195] >gi|12... 247 6e-064
| |
| gb|EAY41757.1| conserved hypothetical protein [Vibrio cholerae M... 246 8e-064
| |
| ref|ZP_01605053.1| GTP-binding protein, HSR1-related [Shewanella... 246 1e-063
| |
| ref|YP_075302.1| hypothetical protein STH1473 [Symbiobacterium t... 246 1e-063
| |
| ref|YP_581544.1| GTP-binding [Psychrobacter cryohalolentis K5] >... 246 1e-063
| |
| ref|YP_857295.1| GTP-binding protein [Aeromonas hydrophila subsp... 246 1e-063
| |
| ref|ZP_01065004.1| putative GTPase YlqF [Vibrio sp. MED222] >gi|... 246 1e-063
| |
| ref|ZP_00990469.1| putative GTPase YlqF [Vibrio splendidus 12B01... 246 1e-063
| |
| ref|YP_870030.1| GTP-binding [Shewanella sp. ANA-3] >gi|11761317... 246 1e-063
| |
| ref|ZP_01707629.1| GTP-binding [Shewanella putrefaciens 200] >gi... 245 2e-063
| |
| ref|YP_563309.1| GTP-binding [Shewanella denitrificans OS217] >g... 245 2e-063
| |
| ref|NP_800222.1| putative GTPase YlqF [Vibrio parahaemolyticus R... 245 2e-063
| |
| ref|YP_734316.1| GTP-binding [Shewanella sp. MR-4] >gi|114047758... 245 2e-063
| |
| ref|ZP_00813928.1| GTP-binding [Shewanella putrefaciens CN-32] >... 245 2e-063
| |
| ref|YP_391323.1| GTP-binding [Thiomicrospira crunogena XCL-2] >g... 245 2e-063
| |
| ref|ZP_01271495.1| GTP-binding protein [Psychrobacter sp. PRwf-1... 244 3e-063
| |
| ref|ZP_01221929.1| putative GTPase [Photobacterium profundum 3TC... 244 3e-063
| |
| ref|YP_132821.1| putative GTPase [Photobacterium profundum SS9] ... 244 4e-063
| |
| ref|NP_718176.1| GTP-binding protein [Shewanella oneidensis MR-1... 243 8e-063
| |
| ref|YP_750176.1| GTP-binding [Shewanella frigidimarina NCIMB 400... 243 8e-063
| |
| ref|YP_001141376.1| conserved GTP-binding protein [Aeromonas sal... 242 1e-062
| |
| ref|ZP_01189808.1| GTP-binding [Halothermothrix orenii H 168] >g... 242 2e-062
| |
| ref|ZP_01260611.1| putative GTPase YlqF [Vibrio alginolyticus 12... 241 3e-062
| |
| ref|YP_341427.1| tRNA modification protein [Pseudoalteromonas ha... 241 4e-062
| |
| ref|ZP_01613912.1| putative tRNA modification protein [Alteromon... 240 7e-062
| |
| gb|EDJ81030.1| GTP-binding protein, HSR1-related [Geobacter bemi... 239 9e-062
| |
| ref|YP_754165.1| GTP-binding protein [Syntrophomonas wolfei subs... 239 9e-062
| |
| ref|YP_901812.1| GTP-binding protein, HSR1-related [Pelobacter p... 239 9e-062
| |
| ref|ZP_01233748.1| putative GTPase [Vibrio angustum S14] >gi|904... 238 2e-061
| |
| ref|YP_693544.1| GTPase family protein [Alcanivorax borkumensis ... 238 3e-061
| |
| ref|ZP_00885526.1| GTP-binding [Caldicellulosiruptor saccharolyt... 237 6e-061
| |
| ref|ZP_01450117.1| hypothetical protein OM2255_21518 [alpha prot... 236 1e-060
| |
| ref|ZP_01111221.1| GTP-binding protein [Alteromonas macleodii 'D... 236 1e-060
| |
| ref|YP_663190.1| GTP-binding [Pseudoalteromonas atlantica T6c] >... 236 1e-060
| |
| ref|YP_794969.1| Predicted GTPase [Lactobacillus brevis ATCC 367... 235 2e-060
| |
| ref|ZP_01162826.1| putative GTPase [Photobacterium sp. SKA34] >g... 235 2e-060
| |
| ref|YP_268441.1| GTP-binding protein [Colwellia psychrerythraea ... 234 4e-060
| |
| ref|YP_193860.1| GTP binding protein [Lactobacillus acidophilus ... 234 4e-060
| |
| ref|ZP_01142846.1| GTP-binding [Geobacter uraniumreducens Rf4] >... 234 4e-060
| |
| ref|ZP_01113895.1| GTP-binding protein [Reinekea sp. MED297] >gi... 233 9e-060
| |
| ref|YP_959640.1| GTP-binding protein, HSR1-related [Marinobacter... 233 9e-060
| |
| ref|ZP_00754788.1| COG1161: Predicted GTPases [Vibrio cholerae O... 230 6e-059
| |
| ref|NP_903582.1| hypothetical protein CV3912 [Chromobacterium vi... 229 1e-058
| |
| ref|NP_604100.1| GTP-binding protein [Fusobacterium nucleatum su... 229 1e-058
| |
| ref|ZP_01736168.1| GTP-binding protein [Marinobacter sp. ELB17] ... 229 2e-058
| |
| ref|YP_356202.1| predicted GTPases [Pelobacter carbinolicus DSM ... 227 6e-058
| |
| ref|ZP_01598445.1| GTP-binding [Marinomonas sp. MWYL1] >gi|11868... 226 8e-058
| |
| ref|YP_619143.1| Putative GTP-binding protein [Lactobacillus del... 226 1e-057
| |
| ref|ZP_01135512.1| putative tRNA modification protein [Pseudoalt... 223 1e-056
| |
| ref|YP_527028.1| GTP-binding protein [Saccharophagus degradans 2... 221 3e-056
| |
| ref|NP_964961.1| hypothetical protein LJ1105 [Lactobacillus john... 220 6e-056
| |
| ref|YP_814740.1| Predicted GTPase [Lactobacillus gasseri ATCC 33... 219 1e-055
| |
| ref|YP_360259.1| GTP-binding protein [Carboxydothermus hydrogeno... 218 3e-055
| |
| ref|ZP_01168307.1| GTP-binding protein [Oceanospirillum sp. MED9... 217 5e-055
| |
| ref|YP_573403.1| GTP-binding [Chromohalobacter salexigens DSM 30... 216 8e-055
| |
| emb|CAK98620.1| putative gtp binding protein [Spiroplasma citri] 216 1e-054
| |
| ref|ZP_01223623.1| putative GTPase YlqF [marine gamma proteobact... 215 2e-054
| |
| ref|YP_545313.1| GTP-binding [Methylobacillus flagellatus KT] >g... 213 7e-054
| |
| ref|YP_207475.1| hypothetical protein NGO0316 [Neisseria gonorrh... 212 2e-053
| |
| ref|NP_866913.1| predicted GTPase [Rhodopirellula baltica SH 1] ... 211 4e-053
| |
| ref|YP_522652.1| GTP-binding [Rhodoferax ferrireducens T118] >gi... 211 5e-053
| |
| ref|YP_974781.1| hypothetical protein NMC0692 [Neisseria meningi... 210 8e-053
| |
| ref|YP_285002.1| GTP-binding [Dechloromonas aromatica RCB] >gi|7... 209 1e-052
| |
| ref|ZP_01074079.1| putative GTPase YlqF [Marinomonas sp. MED121]... 209 2e-052
| |
| ref|ZP_01582789.1| GTP-binding [Delftia acidovorans SPH-1] >gi|1... 208 3e-052
| |
| ref|NP_273781.1| hypothetical protein NMB0739 [Neisseria meningi... 207 4e-052
| |
| ref|NP_283729.1| hypothetical protein NMA0950 [Neisseria meningi... 207 7e-052
| |
| ref|YP_315878.1| GTPase [Thiobacillus denitrificans ATCC 25259] ... 206 1e-051
| |
| gb|AAP58940.1| putative GTPase [Spiroplasma kunkelii] 206 1e-051
| |
| ref|ZP_01519590.1| GTP-binding [Comamonas testosteroni KF-1] >gi... 202 2e-050
| |
| ref|YP_986746.1| GTP-binding protein, HSR1-related [Acidovorax s... 199 2e-049
| |
| ref|YP_981548.1| GTP-binding protein, HSR1-related [Polaromonas ... 198 2e-049
| |
| ref|YP_997517.1| GTP-binding protein, HSR1-related [Verminephrob... 197 7e-049
| |
| ref|YP_160566.1| GTP-binding protein [Azoarcus sp. EbN1] >gi|563... 197 7e-049
| |
| gb|AAV68373.1| putative GTPase [Herminiimonas arsenicoxydans] 196 1e-048
| |
| ref|YP_970622.1| GTP-binding protein [Acidovorax avenae subsp. c... 196 2e-048
| |
| ref|YP_550203.1| GTP-binding [Polaromonas sp. JS666] >gi|9169847... 194 6e-048
| |
| ref|YP_429831.1| GTP-binding [Moorella thermoacetica ATCC 39073]... 192 2e-047
| |
| ref|NP_926812.1| hypothetical protein glr3866 [Gloeobacter viola... 189 1e-046
| |
| ref|YP_053780.1| predicted GTPase [Mesoplasma florum L1] >gi|503... 189 2e-046
| |
| ref|YP_475354.1| GTPase family protein [Synechococcus sp. JA-3-3... 185 3e-045
| |
| ref|NP_001055624.1| Os05g0430400 [Oryza sativa (japonica cultiva... 184 4e-045
| |
| ref|YP_810592.1| Predicted GTPase [Oenococcus oeni PSU-1] >gi|11... 184 4e-045
| |
| ref|ZP_01544319.1| GTP-binding protein [Oenococcus oeni ATCC BAA... 182 1e-044
| |
| ref|YP_424514.1| GTPase family protein [Mycoplasma capricolum su... 182 2e-044
| |
| ref|NP_975415.1| Conserved hypothetical GTP-binding protein [Myc... 182 2e-044
| |
| ref|YP_933624.1| probable GTPase [Azoarcus sp. BH72] >gi|1196708... 181 5e-044
| |
| ref|ZP_01551976.1| GTP-binding protein [Methylophilales bacteriu... 180 7e-044
| |
| ref|NP_950530.1| hypothetical protein PAM278 [Onion yellows phyt... 180 9e-044
| |
| ref|YP_456639.1| GTP-binding protein [Aster yellows witches'-bro... 179 1e-043
| |
| ref|NP_192188.2| GTP-binding family protein [Arabidopsis thalian... 179 2e-043
| |
| gb|AAL38787.1| unknown protein [Arabidopsis thaliana] 179 2e-043
| |
| gb|AAD15335.1| hypothetical protein [Arabidopsis thaliana] >gi|7... 179 2e-043
| |
| gb|EAZ34391.1| hypothetical protein OsJ_017874 [Oryza sativa (ja... 178 3e-043
| |
| gb|EAY98148.1| hypothetical protein OsI_019381 [Oryza sativa (in... 178 3e-043
| |
| ref|YP_001014099.1| Predicted GTPases [Prochlorococcus marinus s... 178 3e-043
| |
| ref|YP_292752.1| GTP-binding [Prochlorococcus marinus str. NATL2... 178 3e-043
| |
| ref|ZP_00514641.1| GTP-binding [Crocosphaera watsonii WH 8501] >... 177 4e-043
| |
| ref|YP_476892.1| GTPase family protein [Synechococcus sp. JA-2-3... 177 6e-043
| |
| ref|YP_513520.1| GTP-binding protein [Francisella tularensis sub... 176 1e-042
| |
| gb|AAX77842.1| unknown protein [synthetic construct] 176 1e-042
| |
| ref|YP_325139.1| GTP-binding [Anabaena variabilis ATCC 29413] >g... 176 1e-042
| |
| ref|YP_170135.1| GTP-binding protein [Francisella tularensis sub... 176 1e-042
| |
| ref|NP_484788.1| hypothetical protein all0745 [Nostoc sp. PCC 71... 176 1e-042
| |
| ref|YP_001122125.1| GTP-binding protein [Francisella tularensis ... 176 2e-042
| |
| ref|ZP_01623463.1| GTP-binding protein [Lyngbya sp. PCC 8106] >g... 176 2e-042
| |
| ref|NP_874614.1| Predicted GTPase [Prochlorococcus marinus subsp... 175 2e-042
| |
| ref|YP_171145.1| hypothetical protein syc0435_d [Synechococcus e... 175 2e-042
| |
| ref|ZP_01006090.1| hypothetical protein P9211_07792 [Prochloroco... 175 3e-042
| |
| gb|EDJ82927.1| GTP-binding protein, HSR1-related [Petrotoga mobi... 174 5e-042
| |
| ref|ZP_01731365.1| hypothetical protein CY0110_06809 [Cyanothece... 174 6e-042
| |
| ref|ZP_01628452.1| hypothetical protein N9414_15165 [Nodularia s... 173 1e-041
| |
| ref|YP_898790.1| GTP-binding protein [Francisella tularensis sub... 172 2e-041
| |
| ref|NP_682297.1| hypothetical protein tlr1507 [Thermosynechococc... 172 2e-041
| |
| ref|YP_722949.1| GTP-binding [Trichodesmium erythraeum IMS101] >... 172 2e-041
| |
| ref|NP_212777.1| hypothetical protein BB0643 [Borrelia burgdorfe... 171 3e-041
| |
| ref|NP_892315.1| hypothetical protein PMM0194 [Prochlorococcus m... 171 3e-041
| |
| ref|YP_001100802.1| putative GTPase [Herminiimonas arsenicoxydan... 170 9e-041
| |
| ref|ZP_00109854.1| COG1161: Predicted GTPases [Nostoc punctiform... 169 1e-040
| |
| ref|YP_382745.1| GTP-binding [Synechococcus sp. CC9605] >gi|7819... 166 1e-039
| |
| ref|ZP_01471301.1| GTP-binding protein [Synechococcus sp. RS9916... 164 4e-039
| |
| ref|NP_895932.1| hypothetical protein PMT2108 [Prochlorococcus m... 164 4e-039
| |
| ref|ZP_01469268.1| GTP-binding protein [Synechococcus sp. BL107]... 164 5e-039
| |
| ref|ZP_01125321.1| hypothetical protein WH7805_10578 [Synechococ... 164 5e-039
| |
| ref|YP_001018794.1| Predicted GTPase [Prochlorococcus marinus st... 163 8e-039
| |
| ref|YP_731895.1| GTPase family protein [Synechococcus sp. CC9311... 163 8e-039
| |
| ref|YP_378143.1| GTP-binding [Synechococcus sp. CC9902] >gi|7817... 163 1e-038
| |
| gb|AAT86009.1| putative GTPase YlqF [Vibrio harveyi] 162 1e-038
| |
| ref|NP_898416.1| hypothetical protein SYNW2327 [Synechococcus sp... 162 2e-038
| |
| ref|ZP_01481649.1| hypothetical protein VchoR_02002454 [Vibrio c... 162 2e-038
| |
| ref|ZP_01083651.1| hypothetical protein WH5701_05155 [Synechococ... 161 3e-038
| |
| ref|YP_001010539.1| Predicted GTPase [Prochlorococcus marinus st... 161 4e-038
| |
| ref|YP_001008607.1| Predicted GTPases [Prochlorococcus marinus s... 160 9e-038
| |
| ref|NP_441269.1| hypothetical protein slr0267 [Synechocystis sp.... 160 9e-038
| |
| ref|YP_001090438.1| Predicted GTPase [Prochlorococcus marinus st... 159 1e-037
| |
| ref|ZP_01079386.1| hypothetical protein RS9917_06730 [Synechococ... 159 2e-037
| |
| ref|YP_396694.1| hypothetical protein PMT9312_0196 [Prochlorococ... 158 4e-037
| |
| ref|YP_073086.1| conserved hypothetical GTP-binding protein [Bor... 157 5e-037
| |
| ref|NP_326137.1| GTP-BINDING PROTEIN [Mycoplasma pulmonis UAB CT... 157 5e-037
| |
| ref|YP_015816.1| putative GTP-binding protein [Mycoplasma mobile... 156 1e-036
| |
| ref|NP_110345.1| similar to GTP-binding protein [Mycoplasma pneu... 156 1e-036
| |
| ref|YP_710094.1| hypothetical protein BAPKO_0687 [Borrelia afzel... 155 2e-036
| |
| gb|AAL31697.1| GTPase [Mycoplasma gallisepticum] 155 2e-036
| |
| gb|AAY83879.1| GTPase-like protein [Bos taurus] >gi|67944523|gb|... 155 3e-036
| |
| ref|NP_001020498.2| GTPase-like protein [Bos taurus] >gi|1340341... 153 9e-036
| |
| gb|AAH26039.1| Mitochondrial GTPase 1 homolog (S. cerevisiae) [H... 153 9e-036
| |
| gb|AAH04409.1| MTG1 protein [Homo sapiens] 153 9e-036
| |
| ref|NP_612393.2| GTP_binding protein [Homo sapiens] >gi|13403417... 153 9e-036
| |
| ref|NP_853404.1| ATP/GTP-binding protein [Mycoplasma galliseptic... 153 1e-035
| |
| ref|XP_001056954.1| PREDICTED: similar to GTP binding protein 7 ... 150 1e-034
| |
| ref|XP_001416772.1| predicted protein [Ostreococcus lucimarinus ... 147 6e-034
| |
| ref|NP_073112.1| GTP-binding conserved hypothetical protein [Myc... 146 1e-033
| |
| ref|XP_001378257.1| PREDICTED: similar to GTPase-like protein [M... 144 4e-033
| |
| ref|YP_287487.1| GTP-binding protein [Mycoplasma hyopneumoniae 7... 144 5e-033
| |
| ref|NP_228577.1| hypothetical protein TM0768 [Thermotoga maritim... 144 5e-033
| |
| ref|NP_001067828.1| Os11g0447300 [Oryza sativa (japonica cultiva... 143 9e-033
| |
| ref|ZP_01651110.1| GTP-binding [Thermotoga petrophila RKU-1] >gi... 143 1e-032
| |
| sp|Q8R2R6|MTG1_MOUSE Mitochondrial GTPase 1, mitochondrial precu... 143 1e-032
| |
| ref|NP_955005.1| GTP binding protein 7 (putative) [Mus musculus]... 143 1e-032
| |
| dbj|BAE25976.1| unnamed protein product [Mus musculus] 143 1e-032
| |
| ref|YP_115807.1| conserved hypothetical protein, GTP binding pro... 142 2e-032
| |
| gb|AAZ44071.2| putative GTP-binding protein [Mycoplasma synoviae... 142 2e-032
| |
| ref|YP_278782.1| putative GTP-binding protein [Mycoplasma synovi... 142 2e-032
| |
| ref|YP_278888.1| putative GTP-binding protein [Mycoplasma hyopne... 141 3e-032
| |
| gb|AAH35721.1| MTG1 protein [Homo sapiens] 138 3e-031
| |
| ref|NP_078431.1| conserved hypothetical ATP/GTP-binding protein ... 136 1e-030
| |
| gb|EAZ29676.1| hypothetical protein OsJ_013159 [Oryza sativa (ja... 136 1e-030
| |
| gb|EAY74228.1| hypothetical protein OsI_002075 [Oryza sativa (in... 136 1e-030
| |
| ref|ZP_01653595.1| GTP-binding [Thermosipho melanesiensis BI429]... 135 2e-030
| |
| ref|ZP_01523964.1| GTP-binding [Fervidobacterium nodosum Rt17-B1... 133 1e-029
| |
| ref|XP_971754.1| PREDICTED: similar to GTP binding protein 7 (pu... 130 1e-028
| |
| ref|ZP_00405440.1| COG1161: Predicted GTPases [Mycoplasma genita... 130 1e-028
| |
| ref|NP_850353.1| GTP-binding family protein [Arabidopsis thalian... 129 2e-028
| |
| ref|NP_651094.2| CG17141-PA [Drosophila melanogaster] >gi|667716... 129 2e-028
| |
| ref|XP_001449396.1| hypothetical protein [Paramecium tetraurelia... 126 1e-027
| |
| gb|EAT44888.1| conserved hypothetical protein [Aedes aegypti] 126 1e-027
| |
| ref|XP_623558.1| PREDICTED: similar to GTP binding protein 7 (pu... 126 1e-027
| |
| ref|XP_001056886.1| PREDICTED: similar to peroxisomal N1-acetyl-... 125 3e-027
| |
| ref|XP_793548.1| PREDICTED: similar to MTG1 protein [Strongyloce... 125 3e-027
| |
| gb|EDK17737.1| GTP-binding protein, HSR1-related [Methanococcus ... 124 4e-027
| |
| ref|YP_001096790.1| GTP-binding protein, HSR1-related [Methanoco... 124 6e-027
| |
| ref|XP_426495.2| PREDICTED: similar to GTPase-like protein [Gall... 123 1e-026
| |
| ref|NP_757439.1| predicted GTPase [Mycoplasma penetrans HF-2] >g... 123 1e-026
| |
| gb|AAB84349.1| unknown protein [Arabidopsis thaliana] 123 1e-026
| |
| ref|NP_988454.1| Solute-binding protein/glutamate receptor:ATP/G... 122 2e-026
| |
| gb|EDK15692.1| GTP-binding protein, HSR1-related [Methanococcus ... 122 3e-026
| |
| ref|XP_318086.3| ENSANGP00000017696 [Anopheles gambiae str. PEST... 120 8e-026
| |
| gb|EAT76198.1| hypothetical protein SNOG_16373 [Phaeosphaeria no... 120 8e-026
| |
| ref|ZP_01702728.1| GTP-binding protein, HSR1-related [Methanococ... 118 3e-025
| |
| dbj|BAC11327.1| unnamed protein product [Homo sapiens] 117 5e-025
| |
| ref|NP_558827.1| GTP binding protein, conjectural [Pyrobaculum a... 116 2e-024
| |
| ref|YP_184270.1| GTPase, MMR1/HSR1 family [Thermococcus kodakare... 114 5e-024
| |
| ref|YP_001057042.1| GTP-binding protein, HSR1-related [Pyrobacul... 114 6e-024
| |
| ref|NP_142603.1| GTP-binding protein [Pyrococcus horikoshii OT3]... 114 8e-024
| |
| ref|ZP_00145231.1| GTP-binding protein [Fusobacterium nucleatum ... 113 1e-023
| |
| dbj|BAE88637.1| unnamed protein product [Macaca fascicularis] 112 2e-023
| |
| gb|EAW61348.1| mitochondrial GTPase 1 homolog (S. cerevisiae), i... 112 3e-023
| |
| gb|ABP49638.1| GTP-binding protein, HSR1-related [Pyrobaculum ar... 111 5e-023
| |
| ref|NP_248468.1| hypothetical GTP-binding protein (SP:P40010) [M... 110 6e-023
| |
| gb|AAH00920.1| MTG1 protein [Homo sapiens] 110 8e-023
| |
| ref|NP_001065460.1| Os10g0572000 [Oryza sativa (japonica cultiva... 109 1e-022
| |
| ref|NP_578727.1| hypothetical GTP-binding protein [Pyrococcus fu... 108 2e-022
| |
| ref|NP_127069.1| hypothetical gtp-binding protein [Pyrococcus ab... 108 4e-022
| |
| ref|XP_001358117.1| GA14342-PA [Drosophila pseudoobscura] >gi|54... 108 4e-022
| |
| ref|XP_662312.1| hypothetical protein AN4708.2 [Aspergillus nidu... 107 7e-022
| |
| gb|AAC35523.1| contains similarity to GTP-binding proteins [Arab... 107 9e-022
| |
| emb|CAG09386.1| unnamed protein product [Tetraodon nigroviridis] 105 3e-021
| |
| ref|YP_930565.1| small GTP-binding protein [Pyrobaculum islandic... 105 4e-021
| |
| ref|XP_001274183.1| mitochondrial GTPase (YlqF), putative [Asper... 103 1e-020
| |
| ref|XP_753769.1| mitochondrial GTPase (YlqF), putative [Aspergil... 101 4e-020
| |
| emb|CAK39399.1| unnamed protein product [Aspergillus niger] 100 1e-019
| |
| ref|YP_920228.1| GTP-binding protein, HSR1-related [Thermofilum ... 99 3e-019
| |
| ref|XP_646954.1| hypothetical protein DDBDRAFT_0202331 [Dictyost... 98 6e-019
| |
| dbj|BAE63616.1| unnamed protein product [Aspergillus oryzae] 97 7e-019
| |
| ref|XP_964281.1| hypothetical protein [Neurospora crassa OR74A] ... 97 7e-019
| |
| ref|NP_001021621.1| Nuclear/nucleolar GTP-binding Protein family... 96 2e-018
| |
| ref|NP_492276.2| Nuclear/nucleolar GTP-binding Protein family me... 96 2e-018
| |
| ref|NP_492275.2| Nuclear/nucleolar GTP-binding Protein family me... 96 2e-018
| |
| ref|XP_827225.1| GTP-binding protein [Trypanosoma brucei TREU927... 94 8e-018
| |
| ref|XP_783153.2| PREDICTED: similar to LOC496093 protein [Strong... 93 1e-017
| |
| ref|YP_001013091.1| predicted GTPase [Hyperthermus butylicus DSM... 92 2e-017
| |
| emb|CAE60434.1| Hypothetical protein CBG04042 [Caenorhabditis br... 92 2e-017
| |
| ref|XP_809521.1| GTP-binding protein [Trypanosoma cruzi strain C... 92 2e-017
| |
| ref|XP_001222503.1| hypothetical protein CHGG_06408 [Chaetomium ... 92 4e-017
| |
| ref|XP_001383648.1| predicted protein [Pichia stipitis CBS 6054]... 91 5e-017
| |
| ref|XP_763794.1| hypothetical protein TP04_0159 [Theileria parva... 91 7e-017
| |
| emb|CAL53459.1| putative nucleostemin (ISS) [Ostreococcus tauri] 91 9e-017
| |
| ref|XP_567813.1| hypothetical protein [Cryptococcus neoformans v... 91 9e-017
| |
| ref|XP_001351420.1| Hypothetical GTP-binding protein [Plasmodium... 90 1e-016
| |
| ref|XP_713268.1| hypothetical protein CaO19.9920 [Candida albica... 90 2e-016
| |
| emb|CAM72414.1| hypothetical protein, conserved [Leishmania infa... 89 2e-016
| |
| emb|CAE57679.1| Hypothetical protein CBG00673 [Caenorhabditis br... 89 2e-016
| |
| ref|XP_001015139.1| conserved hypothetical protein [Tetrahymena ... 89 3e-016
| |
| ref|XP_843623.1| Leishmania major strain Friedlin hypothetical p... 89 3e-016
| |
| sp|Q9C3Z4|NOG2_PNECA Nucleolar GTP-binding protein 2 (Binding-in... 89 3e-016
| |
| ref|NP_495749.1| mammalian NucleoSTemin (stem cell marker) relat... 89 3e-016
| |
| ref|XP_730175.1| hypothetical protein PY02303 [Plasmodium yoelii... 89 3e-016
| |
| gb|AAH91975.1| Guanine nucleotide binding protein-like 3 (nucleo... 88 5e-016
| |
| ref|NP_001002875.1| guanine nucleotide binding protein-like 3 (n... 88 5e-016
| |
| gb|AAH78411.1| Gnl3l protein [Danio rerio] 88 5e-016
| |
| ref|XP_457034.1| hypothetical protein DEHA0B01562g [Debaryomyces... 88 6e-016
| |
| dbj|BAB33072.1| hypothetical protein [Macaca fascicularis] 88 6e-016
| |
| ref|XP_828347.1| GTP-binding protein [Trypanosoma brucei TREU927... 88 6e-016
| |
| ref|XP_001119916.1| PREDICTED: similar to CG3983-PB, isoform B [... 87 8e-016
| |
| emb|CAK38643.1| unnamed protein product [Aspergillus niger] 87 1e-015
| |
| ref|XP_001370987.1| PREDICTED: hypothetical protein [Monodelphis... 87 1e-015
| |
| gb|AAC80186.1| GTP-binding protein homolog [Leishmania brazilien... 87 1e-015
| |
| ref|NP_497417.2| Y67D2.4 [Caenorhabditis elegans] >gi|74217485|g... 87 1e-015
| |
| ref|XP_388693.1| hypothetical protein FG08517.1 [Gibberella zeae... 87 1e-015
| |
| ref|XP_974567.1| PREDICTED: similar to CG3983-PB, isoform B [Tri... 87 1e-015
| |
| ref|NP_613332.1| Predicted GTPase of the YlqF family [Methanopyr... 87 1e-015
| |
| ref|XP_730178.1| GTPase [Plasmodium yoelii yoelii str. 17XNL] >g... 87 1e-015
| |
| ref|XP_744366.1| hypothetical protein PC000635.03.0 [Plasmodium ... 86 2e-015
| |
| ref|XP_680324.1| hypothetical protein [Plasmodium berghei strain... 86 2e-015
| |
| ref|NP_010921.1| GTPase that associates with nuclear 60S pre-rib... 86 2e-015
| |
| gb|EAY90011.1| hypothetical protein OsI_011244 [Oryza sativa (in... 86 3e-015
| |
| ref|NP_001050123.1| Os03g0352400 [Oryza sativa (japonica cultiva... 86 3e-015
| |
| ref|XP_570500.1| hypothetical protein [Cryptococcus neoformans v... 86 3e-015
| |
| ref|NP_377409.1| hypothetical GTP-binding protein [Sulfolobus to... 86 3e-015
| |
| ref|XP_776023.1| hypothetical protein CNBD0720 [Cryptococcus neo... 86 3e-015
| |
| ref|XP_767312.1| GTPase [Giardia lamblia ATCC 50803] >gi|2924552... 86 3e-015
| |
| ref|XP_453670.1| unnamed protein product [Kluyveromyces lactis] ... 85 4e-015
| |
| ref|XP_680322.1| GTP-binding protein [Plasmodium berghei strain ... 85 4e-015
| |
| ref|XP_751931.1| nucleolar GTPase, putative [Aspergillus fumigat... 85 4e-015
| |
| ref|NP_596651.1| hypothetical protein SPBC26H8.08c [Schizosaccha... 85 5e-015
| |
| gb|AAN75146.2| NOG2 [Cryptococcus neoformans var. grubii] 85 5e-015
| |
| ref|NP_611232.1| Ngp CG6501-PA [Drosophila melanogaster] >gi|165... 85 5e-015
| |
| sp|Q8J109|NOG2_CRYNV Nucleolar GTP-binding protein 2 >gi|5656625... 85 5e-015
| |
| ref|NP_983067.1| ABR120Cp [Ashbya gossypii ATCC 10895] >gi|52783... 85 5e-015
| |
| ref|ZP_01600302.1| GTP-binding [Metallosphaera sedula DSM 5348] ... 84 7e-015
| |
| gb|AAV28767.1| 163.m06369p [Cryptococcus gattii] 84 7e-015
| |
| gb|AAV28801.1| 163.m06369p [Cryptococcus gattii] 84 7e-015
| |
| ref|XP_752422.1| GTP binding protein, putative [Aspergillus fumi... 84 7e-015
| |
| gb|AAQ06829.1|AF496168_1 hypothetical protein [Lactobacillus del... 84 9e-015
| |
| ref|XP_505976.1| hypothetical protein [Yarrowia lipolytica] >gi|... 84 9e-015
| |
| ref|XP_715626.1| hypothetical protein CaO19_10434 [Candida albic... 84 9e-015
| |
| ref|XP_001267129.1| nucleolar GTPase, putative [Neosartorya fisc... 84 1e-014
| |
| ref|NP_984104.1| ADR008Wp [Ashbya gossypii ATCC 10895] >gi|44982... 84 1e-014
| |
| ref|YP_306526.1| GTP-binding protein homolog [Methanosarcina bar... 84 1e-014
| |
| ref|XP_459216.1| hypothetical protein DEHA0D18183g [Debaryomyces... 83 1e-014
| |
| ref|NP_187361.1| GTP-binding family protein [Arabidopsis thalian... 83 1e-014
| |
| gb|AAK96878.1| putative GTPase [Arabidopsis thaliana] 83 1e-014
| |
| ref|XP_538054.2| PREDICTED: similar to guanine nucleotide bindin... 83 1e-014
| |
| ref|NP_175706.1| GTP-binding family protein [Arabidopsis thalian... 83 1e-014
| |
| ref|XP_001360630.1| GA19643-PA [Drosophila pseudoobscura] >gi|54... 83 1e-014
| |
| dbj|BAE03250.1| GTP-binding protein [uncultured crenarchaeote 45... 83 2e-014
| |
| ref|XP_814572.1| GTPase [Trypanosoma cruzi strain CL Brener] >gi... 83 2e-014
| |
| gb|EAZ11957.1| hypothetical protein OsJ_001782 [Oryza sativa (ja... 82 2e-014
| |
| gb|EAY74105.1| hypothetical protein OsI_001952 [Oryza sativa (in... 82 2e-014
| |
| gb|AAW27777.1| SJCHGC02137 protein [Schistosoma japonicum] 82 2e-014
| |
| ref|XP_001348519.1| hypothetical protein PF14_0345 [Plasmodium f... 82 2e-014
| |
| gb|AAM49824.1| AT23067p [Drosophila melanogaster] 82 2e-014
| |
| emb|CAJ17930.1| PAM278 homologue [Candidatus Phytoplasma solani] 82 2e-014
| |
| ref|NP_001043076.1| Os01g0375000 [Oryza sativa (japonica cultiva... 82 2e-014
| |
| ref|XP_453040.1| unnamed protein product [Kluyveromyces lactis] ... 82 2e-014
| |
| ref|NP_650593.1| CG3983-PB, isoform B [Drosophila melanogaster] ... 82 2e-014
| |
| ref|XP_001387029.1| predicted protein [Pichia stipitis CBS 6054]... 82 3e-014
| |
| gb|EAZ26923.1| hypothetical protein OsJ_010406 [Oryza sativa (ja... 82 3e-014
| |
| ref|XP_001259817.1| mitochondrial GTPase (YlqF), putative [Neosa... 82 3e-014
| |
| emb|CAJ06657.1| GTPase protein, putative [Leishmania major] 82 3e-014
| |
| ref|XP_445323.1| unnamed protein product [Candida glabrata] >gi|... 82 3e-014
| |
| ref|NP_014451.1| Nog2p [Saccharomyces cerevisiae] >gi|1730685|sp... 82 3e-014
| |
| emb|CAM69923.1| GTPase protein, putative| [Leishmania infantum] 82 4e-014
| |
| gb|AAI25998.1| Unknown (protein for MGC:154605) [Xenopus laevis] 82 4e-014
| |
| gb|EAT45408.1| GTP-binding protein [Aedes aegypti] 82 4e-014
| |
| ref|XP_952005.1| nucleolar GTPase [Theileria annulata strain Ank... 82 4e-014
| |
| ref|YP_565138.1| GTP-binding protein [Methanococcoides burtonii ... 82 4e-014
| |
| gb|AAH87521.1| LOC496093 protein [Xenopus laevis] 82 4e-014
| |
| ref|NP_001001243.1| hypothetical protein LOC407944 [Xenopus trop... 82 4e-014
| |
| ref|XP_381562.1| hypothetical protein FG01386.1 [Gibberella zeae... 82 4e-014
| |
| ref|XP_001271787.1| nucleolar GTPase, putative [Aspergillus clav... 81 6e-014
| |
| gb|AAH42350.1| 1i973-prov protein [Xenopus laevis] 81 6e-014
| |
| ref|XP_001264714.1| GTP-binding protein [Neosartorya fischeri NR... 81 7e-014
| |
| ref|XP_001269207.1| GTP-binding protein [Aspergillus clavatus NR... 81 7e-014
| |
| ref|XP_846365.1| GTP-binding protein, putative [Trypanosoma bruc... 81 7e-014
| |
| ref|XP_417761.1| PREDICTED: similar to nucleolar GTPase [Gallus ... 81 7e-014
| |
| ref|XP_001383428.1| nuclear/nucleolar GTP-binding protein 2 [Pic... 80 9e-014
| |
| ref|XP_001335791.1| PREDICTED: similar to GTP binding protein li... 80 9e-014
| |
| emb|CAJ01966.1| GTPase, putative [Leishmania major] 80 9e-014
| |
| dbj|BAE59162.1| unnamed protein product [Aspergillus oryzae] 80 9e-014
| |
| ref|XP_736805.1| hypothetical protein PC302442.00.0 [Plasmodium ... 80 9e-014
| |
| ref|XP_001329901.1| conserved hypothetical protein [Trichomonas ... 80 1e-013
| |
| gb|EAW93184.1| guanine nucleotide binding protein-like 3 (nucleo... 80 1e-013
| |
| gb|AAH03603.1| Unknown (protein for IMAGE:3543897) [Homo sapiens] 80 1e-013
| |
| ref|XP_001090251.1| PREDICTED: similar to guanine nucleotide bin... 80 1e-013
| |
| ref|XP_001090141.1| PREDICTED: similar to guanine nucleotide bin... 80 1e-013
| |
| ref|XP_455211.1| unnamed protein product [Kluyveromyces lactis] ... 80 1e-013
| |
| gb|AAH95071.1| Gtpbpl protein [Danio rerio] 80 1e-013
| |
| ref|NP_061940.1| guanine nucleotide binding protein-like 3 (nucl... 80 1e-013
| |
| ref|XP_001416555.1| predicted protein [Ostreococcus lucimarinus ... 80 2e-013
| |
| emb|CAM65355.1| GTPase, putative [Leishmania infantum] 80 2e-013
| |
| ref|XP_001210334.1| conserved hypothetical protein [Aspergillus ... 80 2e-013
| |
| gb|ABE80457.1| GTP1/OBG; NGP1, N-terminal [Medicago truncatula] 80 2e-013
| |
| ref|XP_649245.1| putative GTPase [Entamoeba histolytica HM-1:IMSS] 80 2e-013
| |
| ref|XP_648675.1| putative GTPase [Entamoeba histolytica HM-1:IMSS] 80 2e-013
| |
| ref|XP_309340.3| ENSANGP00000014927 [Anopheles gambiae str. PEST... 79 2e-013
| |
| emb|CAL54952.1| putative GTP-binding protein; 106556-109264 (ISS... 79 2e-013
| |
| ref|XP_001348395.1| hypothetical protein, conserved [Plasmodium ... 79 2e-013
| |
| ref|XP_532556.2| PREDICTED: similar to Nucleolar GTP-binding pro... 79 2e-013
| |
| ref|XP_858349.1| PREDICTED: similar to Nucleolar GTP-binding pro... 79 2e-013
| |
| ref|XP_858385.1| PREDICTED: similar to Nucleolar GTP-binding pro... 79 2e-013
| |
| gb|AAH00107.1| Guanine nucleotide binding protein-like 2 (nucleo... 79 2e-013
| |
| ref|NP_593896.1| hypothetical protein SPAC6F6.03c [Schizosacchar... 79 2e-013
| |
| ref|XP_820923.1| GTPase protein [Trypanosoma cruzi strain CL Bre... 79 2e-013
| |
| emb|CAK45288.1| unnamed protein product [Aspergillus niger] 79 3e-013
| |
| ref|XP_001435078.1| hypothetical protein [Paramecium tetraurelia... 79 3e-013
| |
| ref|NP_342104.1| GTP binding protein, hypothetical [Sulfolobus s... 79 3e-013
| |
| emb|CAM40798.1| GTPase protein, putative [Leishmania braziliensis] 79 4e-013
| |
| emb|CAF96799.1| unnamed protein product [Tetraodon nigroviridis] 79 4e-013
| |
| ref|XP_765275.1| hypothetical protein TP02_0708 [Theileria parva... 79 4e-013
| |
| emb|CAM36881.1| GTPase, putative [Leishmania braziliensis] 78 5e-013
| |
| ref|XP_524667.2| PREDICTED: guanine nucleotide binding protein-l... 78 5e-013
| |
| ref|XP_001169332.1| PREDICTED: guanine nucleotide binding protei... 78 5e-013
| |
| ref|NP_001029479.1| hypothetical protein LOC507679 [Bos taurus] ... 78 5e-013
| |
| ref|NP_037417.1| guanine nucleotide binding protein-like 2 (nucl... 78 5e-013
| |
| ref|XP_001419139.1| predicted protein [Ostreococcus lucimarinus ... 78 6e-013
| |
| ref|NP_740787.2| C53H9.2a [Caenorhabditis elegans] >gi|89179570|... 78 6e-013
| |
| ref|NP_740788.1| C53H9.2b [Caenorhabditis elegans] >gi|18250215|... 78 6e-013
| |
| ref|NP_001021060.1| C53H9.2c [Caenorhabditis elegans] >gi|288948... 78 6e-013
| |
| ref|XP_447221.1| unnamed protein product [Candida glabrata] >gi|... 78 6e-013
| |
| ref|XP_641354.1| hypothetical protein DDBDRAFT_0206493 [Dictyost... 78 6e-013
| |
| ref|XP_001380286.1| PREDICTED: similar to guanine nucleotide bin... 77 8e-013
| |
| ref|XP_001239338.1| hypothetical protein CIMG_08959 [Coccidioide... 77 8e-013
| |
| ref|XP_505719.1| hypothetical protein [Yarrowia lipolytica] >gi|... 77 8e-013
| |
| ref|NP_013815.1| Mtg1p [Saccharomyces cerevisiae] >gi|2497147|sp... 77 8e-013
| |
| ref|XP_955718.1| GTP-binding protein [Encephalitozoon cuniculi G... 77 8e-013
| |
| ref|XP_001364582.1| PREDICTED: similar to nucleolar GTPase isofo... 77 1e-012
| |
| ref|XP_001364644.1| PREDICTED: similar to nucleolar GTPase isofo... 77 1e-012
| |
| ref|XP_790294.2| PREDICTED: similar to guanine nucleotide bindin... 77 1e-012
| |
| ref|XP_001192782.1| PREDICTED: similar to guanine nucleotide bin... 77 1e-012
| |
| ref|XP_967515.1| PREDICTED: similar to CG6501-PA [Tribolium cast... 77 1e-012
| |
| emb|CAE74467.1| Hypothetical protein CBG22213 [Caenorhabditis br... 77 1e-012
| |
| ref|XP_965677.1| hypothetical protein [Neurospora crassa OR74A] ... 77 1e-012
| |
| ref|XP_729651.1| autoantigen ngp-1 [Plasmodium yoelii yoelii str... 77 1e-012
| |
| ref|XP_001436662.1| hypothetical protein [Paramecium tetraurelia... 76 2e-012
| |
| gb|EAT91611.1| hypothetical protein SNOG_00116 [Phaeosphaeria no... 76 2e-012
| |
| ref|XP_679354.1| autoantigen ngp-1 [Plasmodium berghei strain AN... 76 2e-012
| |
| ref|XP_447764.1| unnamed protein product [Candida glabrata] >gi|... 76 2e-012
| |
| ref|NP_001039432.1| hypothetical protein LOC507369 [Bos taurus] ... 76 2e-012
| |
| ref|NP_001002140.1| GTP binding protein like [Danio rerio] >gi|1... 76 2e-012
| |
| ref|XP_757111.1| hypothetical protein UM00964.1 [Ustilago maydis... 76 2e-012
| |
| emb|CAM20897.1| guanine nucleotide binding protein-like 2 (nucle... 75 3e-012
| |
| gb|EAT85377.1| hypothetical protein SNOG_06726 [Phaeosphaeria no... 75 3e-012
| |
| ref|YP_256169.1| GTP-binding protein [Sulfolobus acidocaldarius ... 75 3e-012
| |
| dbj|BAE64166.1| unnamed protein product [Aspergillus oryzae] 75 3e-012
| |
| dbj|BAE20521.1| unnamed protein product [Mus musculus] 75 3e-012
| |
| emb|CAF96878.1| unnamed protein product [Tetraodon nigroviridis] 75 3e-012
| |
| dbj|BAC36850.1| unnamed protein product [Mus musculus] 75 3e-012
| |
| ref|NP_663527.1| guanine nucleotide binding protein-like 2 (nucl... 75 3e-012
| |
| ref|XP_001024171.1| conserved hypothetical protein [Tetrahymena ... 75 4e-012
| |
| gb|AAB09043.1| testicular antigen [Mus musculus] 75 4e-012
| |
| ref|ZP_01481650.1| hypothetical protein VchoR_02002455 [Vibrio c... 75 5e-012
| |
| ref|XP_658819.1| hypothetical protein AN1215.2 [Aspergillus nidu... 75 5e-012
| |
| gb|EDK04725.1| hypothetical protein MGG_01561 [Magnaporthe grise... 74 7e-012
| |
| gb|ABF57441.1| guanine nucleotide binding protein-like 2 (nucleo... 74 7e-012
| |
| dbj|BAE27145.1| unnamed protein product [Mus musculus] 74 7e-012
| |
| emb|CAH89726.1| hypothetical protein [Pongo pygmaeus] 74 7e-012
| |
| ref|XP_001214500.1| nucleolar GTP-binding protein 2 [Aspergillus... 74 9e-012
| |
| sp|Q6TGJ8|NOG2_CRYGA Nucleolar GTP-binding protein 2 >gi|4640302... 74 1e-011
| |
| ref|XP_001335637.1| PREDICTED: similar to Guanine nucleotide bin... 73 2e-011
| |
| gb|AAH75773.1| Gnl3 protein [Danio rerio] 73 2e-011
| |
| ref|XP_849529.1| PREDICTED: similar to GTP binding protein 7 (pu... 73 2e-011
| |
| ref|NP_634543.1| GTP-binding protein homolog [Methanosarcina maz... 73 2e-011
| |
|
| |
| >ref|NP_389487.1| hypothetical protein BSU16050 [Bacillus subtilis subsp. subtilis
| |
| str. 168]
| |
| pdb|1PUJ|A Chain A, Structure Of B. Subtilis Ylqf Gtpase
| |
| emb|CAB13478.1| ylqF [Bacillus subtilis subsp. subtilis str. 168]
| |
| Length = 282
| |
|
| |
| Score = 558 bits (1437), Expect = e-157
| |
| Identities = 282/282 (100%), Positives = 282/282 (100%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA
| |
| Sbjct: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA
| |
| Sbjct: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF
| |
| Sbjct: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA
| |
| Sbjct: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM
| |
| Sbjct: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
|
| |
|
| |
| >ref|YP_078998.1| GTP-binding domain protein [Bacillus licheniformis ATCC 14580]
| |
| ref|YP_091413.1| YlqF [Bacillus licheniformis ATCC 14580]
| |
| gb|AAU23360.1| GTP-binding domain protein [Bacillus licheniformis ATCC 14580]
| |
| gb|AAU40720.1| YlqF [Bacillus licheniformis DSM 13]
| |
| Length = 283
| |
|
| |
| Score = 501 bits (1290), Expect = e-140
| |
| Identities = 247/280 (88%), Positives = 269/280 (96%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA
| |
| Sbjct: 1 MVIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| DKAD++VT+ WK+HFE GI +L+INSVNGQGLNQI+PASKE+L+EKFD+M+AKGVKPRA
| |
| Sbjct: 61 DKADSSVTKAWKQHFEKDGIPTLAINSVNGQGLNQILPASKELLKEKFDKMKAKGVKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALI+GIPNVGKSTLINRLAKKNIAKTGDRPG+TT+QQWVKVGKELELLDTPGILWPKF
| |
| Sbjct: 121 IRALIVGIPNVGKSTLINRLAKKNIAKTGDRPGVTTAQQWVKVGKELELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDELVGLRLA TGAIKDSIINLQDVAV+GLRFLEE+YPERLK+RY L+EIPE+IA LFD
| |
| Sbjct: 181 EDELVGLRLAATGAIKDSIINLQDVAVYGLRFLEENYPERLKKRYDLEEIPEEIAALFDE 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+KRGCLM+GG INYDKTTEVIIRDIRTEKFG LSFE+P
| |
| Sbjct: 241 IGKKRGCLMAGGEINYDKTTEVIIRDIRTEKFGPLSFEKP 280
| |
|
| |
|
| |
| >emb|CAD70603.1| hypothetical protein [Bacillus megaterium]
| |
| Length = 361
| |
|
| |
| Score = 434 bits (1116), Expect = e-120
| |
| Identities = 207/279 (74%), Positives = 248/279 (88%), Gaps = 1/279 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARR+VTEKLKLIDIVYELVDARIP SSRNPMI++I+ NKPRI+LLNK
| |
| Sbjct: 1 MTIQWFPGHMAKARRQVTEKLKLIDIVYELVDARIPQSSRNPMIDEIIVNKPRIVLLNKV 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK-PR 119
| |
| DKAD VTQQW ++++ QGI +L+I++ G+G+ QIV +SKE+LQEKFDRMRAKGVK PR
| |
| Sbjct: 61 DKADPRVTQQWLDYYKEQGIYALAIDAQAGKGMKQIVSSSKELLQEKFDRMRAKGVKKPR 120
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| AIRA+I+GIPNVGKSTLINRLA K IAKTGDRPG+T +QQW+KVG ELELLDTPGILWPK
| |
| Sbjct: 121 AIRAMIVGIPNVGKSTLINRLASKKIAKTGDRPGVTQAQQWIKVGNELELLDTPGILWPK 180
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| FEDE VG +LA TGAIKD+I+N+QDVAV+ LRFL HYPE+LK+RY L+EIPEDI ELFD
| |
| Sbjct: 181 FEDETVGYKLATTGAIKDTILNMQDVAVYALRFLTSHYPEQLKQRYNLNEIPEDIVELFD 240
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| AIG +RGCLM GG+++YDKT E+++R+IRT+K G +F+
| |
| Sbjct: 241 AIGSRRGCLMGGGMVDYDKTAELVLREIRTDKIGTFTFD 279
| |
|
| |
|
| |
| >ref|YP_896211.1| GTPase family [Bacillus thuringiensis str. Al Hakam]
| |
| gb|ABK86704.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
| |
| Hakam]
| |
| Length = 314
| |
|
| |
| Score = 429 bits (1104), Expect = e-119
| |
| Identities = 200/280 (71%), Positives = 251/280 (89%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKARR+VTEKLKLID+V ELVDAR+P+SSRNPMI++I+ +KPR+++LNKA
| |
| Sbjct: 19 MVIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA 78
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T+QW +F+ +G ++SIN+ GQG+ +I A K +++EKFD+M AKG++PRA
| |
| Sbjct: 79 DMADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRA 138
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALI+GIPNVGKSTLIN+LAKKNIAKTGDRPG+TT+QQW+KVGKE+ELLDTPGILWPKF
| |
| Sbjct: 139 IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF 198
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDELVGLRLA TGAIKDSI+NLQDVAV+ LRF+E+HYPERLKERY L++IPEDI ELFDA
| |
| Sbjct: 199 EDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYNLNDIPEDIVELFDA 258
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+ RGCLM GG+I+YDKT+E+++R++R K G+++FE P
| |
| Sbjct: 259 IGKNRGCLMGGGMIDYDKTSELVLRELRGGKLGKMTFETP 298
| |
|
| |
|
| |
| >ref|YP_085179.1| conserved hypothetical protein; GTPase family [Bacillus cereus
| |
| E33L]
| |
| gb|AAU16669.1| conserved hypothetical protein; GTPase family [Bacillus cereus
| |
| E33L]
| |
| Length = 296
| |
|
| |
| Score = 429 bits (1104), Expect = e-119
| |
| Identities = 200/280 (71%), Positives = 251/280 (89%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKARR+VTEKLKLID+V ELVDAR+P+SSRNPMI++I+ +KPR+++LNKA
| |
| Sbjct: 1 MVIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T+QW +F+ +G ++SIN+ GQG+ +I A K +++EKFD+M AKG++PRA
| |
| Sbjct: 61 DMADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALI+GIPNVGKSTLIN+LAKKNIAKTGDRPG+TT+QQW+KVGKE+ELLDTPGILWPKF
| |
| Sbjct: 121 IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDELVGLRLA TGAIKDSI+NLQDVAV+ LRF+E+HYPERLKERY L++IPEDI ELFDA
| |
| Sbjct: 181 EDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYNLNDIPEDIVELFDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+ RGCLM GG+I+YDKT+E+++R++R K G+++FE P
| |
| Sbjct: 241 IGKNRGCLMGGGMIDYDKTSELVLRELRGGKLGKMTFETP 280
| |
|
| |
|
| |
| >ref|NP_833557.1| GTP-binding protein [Bacillus cereus ATCC 14579]
| |
| gb|AAP10758.1| GTP-binding protein [Bacillus cereus ATCC 14579]
| |
| Length = 296
| |
|
| |
| Score = 429 bits (1104), Expect = e-119
| |
| Identities = 200/280 (71%), Positives = 251/280 (89%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKARR+VTEKLKLID+V ELVDAR+P+SSRNPMI++I+ +KPR+++LNKA
| |
| Sbjct: 1 MVIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T+QW +F+ +G ++SIN+ GQG+ +I A K +++EKFD+M AKG++PRA
| |
| Sbjct: 61 DMADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALI+GIPNVGKSTLIN+LAKKNIAKTGDRPG+TT+QQW+KVGKE+ELLDTPGILWPKF
| |
| Sbjct: 121 IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+LVGLRLA TGAIKDSI+NLQDVAV+ LRF+E+HYPERLKERY L+EIPEDI ELFDA
| |
| Sbjct: 181 EDQLVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYNLNEIPEDIVELFDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+ RGCLM GG+I+YDKT+E+++R++R K G+++FE P
| |
| Sbjct: 241 IGKNRGCLMGGGMIDYDKTSELVLRELRGGKLGKMTFETP 280
| |
|
| |
|
| |
| >ref|YP_037899.1| conserved hypothetical protein, GTPase family [Bacillus
| |
| thuringiensis serovar konkukian str. 97-27]
| |
| gb|AAT60609.1| conserved hypothetical protein, GTPase family [Bacillus
| |
| thuringiensis serovar konkukian str. 97-27]
| |
| Length = 296
| |
|
| |
| Score = 428 bits (1101), Expect = e-118
| |
| Identities = 199/280 (71%), Positives = 251/280 (89%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKARR+VTEKLKLID+V ELVDAR+P+SSRNPMI++I+ +KPR+++LNKA
| |
| Sbjct: 1 MVIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T+QW +F+ +G ++SIN+ GQG+ +I A K +++EKFD+M AKG++PR+
| |
| Sbjct: 61 DMADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRS 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALI+GIPNVGKSTLIN+LAKKNIAKTGDRPG+TT+QQW+KVGKE+ELLDTPGILWPKF
| |
| Sbjct: 121 IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDELVGLRLA TGAIKDSI+NLQDVAV+ LRF+E+HYPERLKERY L++IPEDI ELFDA
| |
| Sbjct: 181 EDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYNLNDIPEDIVELFDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+ RGCLM GG+I+YDKT+E+++R++R K G+++FE P
| |
| Sbjct: 241 IGKNRGCLMGGGMIDYDKTSELVLRELRGGKLGKMTFETP 280
| |
|
| |
|
| |
| >ref|NP_846218.1| GTPase family protein [Bacillus anthracis str. Ames]
| |
| ref|YP_020615.1| gtpase family protein [Bacillus anthracis str. 'Ames Ancestor']
| |
| ref|YP_029940.1| GTPase family protein [Bacillus anthracis str. Sterne]
| |
| ref|ZP_00394124.1| COG1161: Predicted GTPases [Bacillus anthracis str. A2012]
| |
| gb|AAP27704.1| GTPase family protein [Bacillus anthracis str. Ames]
| |
| gb|AAT33090.1| GTPase family protein [Bacillus anthracis str. 'Ames Ancestor']
| |
| gb|AAT55991.1| GTPase family protein [Bacillus anthracis str. Sterne]
| |
| Length = 296
| |
|
| |
| Score = 428 bits (1100), Expect = e-118
| |
| Identities = 199/280 (71%), Positives = 250/280 (89%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKARR+VTEKLKLID+V ELVDAR+P+SSRNPMI++I+ +KPR+++LNKA
| |
| Sbjct: 1 MVIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T+QW +F+ +G ++SIN+ GQG+ +I A K +++EKFD+M AKG++PR
| |
| Sbjct: 61 DMADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRV 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALI+GIPNVGKSTLIN+LAKKNIAKTGDRPG+TT+QQW+KVGKE+ELLDTPGILWPKF
| |
| Sbjct: 121 IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDELVGLRLA TGAIKDSI+NLQDVAV+ LRF+E+HYPERLKERY L++IPEDI ELFDA
| |
| Sbjct: 181 EDELVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPERLKERYNLNDIPEDIVELFDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+ RGCLM GG+I+YDKT+E+++R++R K G+++FE P
| |
| Sbjct: 241 IGKNRGCLMGGGMIDYDKTSELVLRELRGGKLGKMTFETP 280
| |
|
| |
|
| |
| >ref|NP_980177.1| GTPase family protein [Bacillus cereus ATCC 10987]
| |
| gb|AAS42785.1| GTPase family protein [Bacillus cereus ATCC 10987]
| |
| Length = 296
| |
|
| |
| Score = 427 bits (1099), Expect = e-118
| |
| Identities = 199/280 (71%), Positives = 251/280 (89%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKARR+VTEKLKLID+V ELVDAR+P+SSRNPMI++I+ +KPR+++LNKA
| |
| Sbjct: 1 MVIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T+QW +F+ +G ++SIN+ GQG+ +I A K +++EKFD+M AKG++PRA
| |
| Sbjct: 61 DMADDRLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALI+GIPNVGKSTLIN+LAKKNIAKTGDRPG+TT+QQW+KVGKE+ELLDTPGILWPKF
| |
| Sbjct: 121 IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+LVGLRLA TGAIKDSI+NLQDVAV+ LRF+E+HYP+RLKERY L++IPEDI ELFDA
| |
| Sbjct: 181 EDQLVGLRLATTGAIKDSILNLQDVAVYALRFMEKHYPDRLKERYNLNDIPEDIVELFDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+ RGCLM GG+I+YDKT+E+I+R++R K G+++FE P
| |
| Sbjct: 241 IGKNRGCLMGGGMIDYDKTSELILRELRGGKLGKMTFETP 280
| |
|
| |
|
| |
| >ref|YP_001125178.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2]
| |
| gb|ABO66433.1| GTP-binding protein [Geobacillus thermodenitrificans NG80-2]
| |
| Length = 286
| |
|
| |
| Score = 411 bits (1056), Expect = e-113
| |
| Identities = 195/281 (69%), Positives = 241/281 (85%), Gaps = 1/281 (0%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAKA+REV EKLKLID+ +EL+DAR+PMSSRNPMI+DIL K R++LLNKAD
| |
| Sbjct: 4 IQWFPGHMAKAKREVQEKLKLIDVAFELLDARVPMSSRNPMIDDILGQKTRLILLNKADM 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK-PRAI 121
| |
| AD AVT+QW +F +QG +++I++ +G G+ QIV A+KE++++KF++MRAKG+K PR +
| |
| Sbjct: 64 ADEAVTEQWIRYFRDQGRTAIAIDAQSGTGVKQIVAAAKEMVKDKFEKMRAKGIKNPRPV 123
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RALI+GIPNVGKSTLINRLA ++IAKTGD+PG+T +QQW+KVGKE+ELLDTPGILWPKFE
| |
| Sbjct: 124 RALIVGIPNVGKSTLINRLAGRHIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 183
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| DE VG RLAVTGAIKD I+NLQDVAV+ LRFL HYPER+ ERYGLD IP+DI LFDAI
| |
| Sbjct: 184 DEDVGYRLAVTGAIKDEILNLQDVAVYALRFLSSHYPERITERYGLDRIPDDIVALFDAI 243
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| G +RGCL GG I+YDK ++++ DIRTEK GRLSFE P +
| |
| Sbjct: 244 GRRRGCLTGGGGIDYDKVADIVLYDIRTEKLGRLSFETPAL 284
| |
|
| |
|
| |
| >ref|YP_147057.1| hypothetical protein GK1204 [Geobacillus kaustophilus HTA426]
| |
| dbj|BAD75489.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
| |
| Length = 286
| |
|
| |
| Score = 409 bits (1050), Expect = e-112
| |
| Identities = 193/279 (69%), Positives = 239/279 (85%), Gaps = 1/279 (0%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAKA+REV EKLKLID+ +EL+DAR+PMSSRNPMI++IL KPR++LLNKAD
| |
| Sbjct: 4 IQWFPGHMAKAKREVQEKLKLIDVAFELLDARVPMSSRNPMIDEILGQKPRLILLNKADM 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK-PRAI 121
| |
| AD AVT+QW +F +QG +L I++ +G G+ QI A+KE++++KF++MRAKG+K PR +
| |
| Sbjct: 64 ADEAVTEQWIRYFHDQGRLALPIDAQSGTGVRQIAAAAKEMVKDKFEKMRAKGIKNPRPV 123
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RALI+GIPNVGKSTLINRLA ++IAKTGD+PG+T +QQW+KVGKE+ELLDTPGILWPKFE
| |
| Sbjct: 124 RALIVGIPNVGKSTLINRLAGRHIAKTGDKPGVTKAQQWIKVGKEMELLDTPGILWPKFE 183
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| DE VG +LAVTGAIKD I+NLQDVAV+ LRFL HYP RL ERYGLD+IP+DI LFD I
| |
| Sbjct: 184 DEDVGYKLAVTGAIKDEILNLQDVAVYALRFLSTHYPNRLAERYGLDDIPDDIVALFDTI 243
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| G +RGCL SGG ++YDK ++++ DIRTEK GRLSFE P
| |
| Sbjct: 244 GRRRGCLTSGGAVDYDKVADIVLYDIRTEKLGRLSFETP 282
| |
|
| |
|
| |
| >ref|ZP_01171545.1| GTPase family protein [Bacillus sp. NRRL B-14911]
| |
| gb|EAR65744.1| GTPase family protein [Bacillus sp. NRRL B-14911]
| |
| Length = 281
| |
|
| |
| Score = 391 bits (1004), Expect = e-107
| |
| Identities = 184/272 (67%), Positives = 232/272 (85%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQ 69
| |
| MAKARR+VTEKLKL+DI++ELVDAR+P SSRNPMI++I+++KPR++LLNKAD AD T+
| |
| Sbjct: 1 MAKARRQVTEKLKLVDIIFELVDARLPQSSRNPMIDEIIQHKPRLVLLNKADMADKEATK 60
| |
|
| |
| Query: 70 QWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIP 129
| |
| W +F ++GI++L+INS G G+ I A++EIL+EKFDRMRAKGVKPRAIR +I+GIP
| |
| Sbjct: 61 AWIRYFSDRGIKALAINSQAGSGMKDISSAAQEILKEKFDRMRAKGVKPRAIRGMIVGIP 120
| |
|
| |
| Query: 130 NVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRL 189
| |
| NVGKSTLINRLAKKNIAKTG+ PG+T +QQW+K GKE+ELLDTPGILWPKFED+ VGL+L
| |
| Sbjct: 121 NVGKSTLINRLAKKNIAKTGNMPGVTKAQQWIKAGKEMELLDTPGILWPKFEDQEVGLKL 180
| |
|
| |
| Query: 190 AVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLM 249
| |
| A++GAIKD+I+NL D+A++ L+FLE+HYP RL ERY L+E PE+ E FD IG RGCLM
| |
| Sbjct: 181 ALSGAIKDTILNLHDIAIYALKFLEKHYPGRLLERYSLEEFPEEAVEAFDKIGRLRGCLM 240
| |
|
| |
| Query: 250 SGGLINYDKTTEVIIRDIRTEKFGRLSFEQPT 281
| |
| GG ++YDK E+IIR+IRTEK G LSFE P+
| |
| Sbjct: 241 GGGEVDYDKVAELIIREIRTEKLGPLSFEHPS 272
| |
|
| |
|
| |
| >ref|NP_243342.1| hypothetical protein BH2476 [Bacillus halodurans C-125]
| |
| dbj|BAA75361.1| YlqF [Bacillus halodurans]
| |
| dbj|BAB06195.1| BH2476 [Bacillus halodurans C-125]
| |
| Length = 284
| |
|
| |
| Score = 377 bits (968), Expect = e-103
| |
| Identities = 180/280 (64%), Positives = 227/280 (81%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREVTEKLKLID+V EL+DAR+P+SSRNPM+++I+ +KPR++LLNK
| |
| Sbjct: 1 MTIQWFPGHMAKARREVTEKLKLIDVVIELLDARVPLSSRNPMMDEIVAHKPRLVLLNKD 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD + T++W FE G L IN+ GQG+++I PA + + Q ++ RAKG+KPRA
| |
| Sbjct: 61 DLADPSKTKEWTRFFEEGGATVLPINAQTGQGVSRISPACQTLAQALIEKQRAKGMKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLINRLA K IAK GDRPGIT QQW+KVGKELELLDTPGILWPKF
| |
| Sbjct: 121 IRAMILGIPNVGKSTLINRLASKRIAKVGDRPGITKQQQWIKVGKELELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| +D+ G RLA TGAIKD +++ QDVA+F LR++ E YP+RL +RY L+E+PED LFDA
| |
| Sbjct: 181 DDQATGFRLAATGAIKDELLDFQDVALFVLRYMREMYPDRLMDRYKLNELPEDGVTLFDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+KRG L+SGG I+YDKT E+I+R++R GR++ E P
| |
| Sbjct: 241 IGKKRGHLLSGGYIDYDKTAEMILRELRAGTLGRITLEVP 280
| |
|
| |
|
| |
| >ref|ZP_01725897.1| ribosomal biogenesis GTPase [Bacillus sp. B14905]
| |
| gb|EAZ83598.1| ribosomal biogenesis GTPase [Bacillus sp. B14905]
| |
| Length = 281
| |
|
| |
| Score = 369 bits (948), Expect = e-101
| |
| Identities = 170/269 (63%), Positives = 231/269 (85%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQ 69
| |
| MAKARREVTEKLKL+DI++EL+DAR+P+SSRNPMI++++ KPR+++LNKAD AD T+
| |
| Sbjct: 1 MAKARREVTEKLKLVDIIFELIDARLPLSSRNPMIDEVINQKPRLLILNKADMADEQETR 60
| |
|
| |
| Query: 70 QWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIP 129
| |
| +W ++F +G ++++INS+ G+GL Q+ A++EIL+EKFDRM+AKG+KPRAIRA+I+GIP
| |
| Sbjct: 61 KWVDYFAQRGHKAVAINSLEGKGLQQVTKAAQEILKEKFDRMKAKGMKPRAIRAMIVGIP 120
| |
|
| |
| Query: 130 NVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRL 189
| |
| NVGKSTLINRLAKKNIAKTG+ PG+T +QQW+KVGKELELLDTPGILWPKFED+ VG +L
| |
| Sbjct: 121 NVGKSTLINRLAKKNIAKTGNTPGVTKAQQWIKVGKELELLDTPGILWPKFEDQEVGFKL 180
| |
|
| |
| Query: 190 AVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLM 249
| |
| A+TGAIKD+I N++D+AV+GLRFL HYP+R++ERYG + + ED+ E FD IG+ R
| |
| Sbjct: 181 ALTGAIKDTITNMEDLAVYGLRFLSVHYPKRMEERYGFEFVHEDLVETFDHIGKLRRVFG 240
| |
|
| |
| Query: 250 SGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| +GG I+YD+ ++I+RDIR + G+L+F+
| |
| Sbjct: 241 AGGEIDYDQVAQLIVRDIRGLQLGKLTFD 269
| |
|
| |
|
| |
| >ref|YP_849486.1| GTPase family protein [Listeria welshimeri serovar 6b str.
| |
| SLCC5334]
| |
| emb|CAK20707.1| unnamed protein product [Listeria welshimeri serovar 6b str.
| |
| SLCC5334]
| |
| Length = 287
| |
|
| |
| Score = 355 bits (912), Expect = 1e-096
| |
| Identities = 163/280 (58%), Positives = 230/280 (82%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREVTEKLKL+D+++ELVDARIP+SS NPM+E+I+ K R+++LNKA
| |
| Sbjct: 1 MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD T++W ++F ++G+ ++++N+ G+GL +I A+++++ EKFDR+R+KG+KPRA
| |
| Sbjct: 61 DTADEKTTKEWIDYFADKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLINRLAKKNIA+TG++PG+T +QQW+KVGK LELLDTPGILWPKF
| |
| Sbjct: 121 IRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+ +G +LA+TGAIKD ++ ++D+A +GLRFLE++YP+RL+ ++++ ED E
| |
| Sbjct: 181 EDQEIGYKLALTGAIKDDLLQMEDIAGYGLRFLEKNYPDRLENWLKVEKVSEDPIETLAF 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I EKRG L +Y + E ++R+IR +K GR+SF+ P
| |
| Sbjct: 241 IAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFP 280
| |
|
| |
|
| |
| >ref|YP_013888.1| GTPase family protein [Listeria monocytogenes str. 4b F2365]
| |
| ref|ZP_00231659.1| GTPase family protein [Listeria monocytogenes str. 4b H7858]
| |
| gb|AAT04065.1| GTPase family protein [Listeria monocytogenes str. 4b F2365]
| |
| gb|EAL08500.1| GTPase family protein [Listeria monocytogenes str. 4b H7858]
| |
| gb|EBA29111.1| GTPase family protein [Listeria monocytogenes FSL N1-017]
| |
| gb|EBA37096.1| GTPase family protein [Listeria monocytogenes HPB2262]
| |
| Length = 287
| |
|
| |
| Score = 355 bits (912), Expect = 1e-096
| |
| Identities = 163/280 (58%), Positives = 228/280 (81%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREVTEKLKL+D+++ELVDARIP+SS NPM+E+I+ K R+++LNKA
| |
| Sbjct: 1 MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD T++W ++F +G+ ++++N+ G+GL +I A+++++ EKFDR+R+KG+KPRA
| |
| Sbjct: 61 DTADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLINRLAKKNIA+TG++PG+T +QQW+KVGK LELLDTPGILWPKF
| |
| Sbjct: 121 IRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+ +G +LA+TGAIKD ++ ++++A +GLRFLE+HYP+RL+ ++ + ED E
| |
| Sbjct: 181 EDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEKHYPDRLQNWLKVETVSEDPIETLAF 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I EKRG L +Y + E ++R+IR +K GR+SF+ P
| |
| Sbjct: 241 IAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFP 280
| |
|
| |
|
| |
| >ref|NP_470647.1| hypothetical protein lin1311 [Listeria innocua Clip11262]
| |
| emb|CAC96542.1| lin1311 [Listeria innocua]
| |
| Length = 287
| |
|
| |
| Score = 355 bits (910), Expect = 2e-096
| |
| Identities = 162/280 (57%), Positives = 229/280 (81%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREVTEKLKL+D+++ELVDARIP+SS NPM+E+I+ K R+++LNKA
| |
| Sbjct: 1 MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD T++W ++F +G+ ++++N+ G+GL +I A+++++ EKF+R+R+KG+KPRA
| |
| Sbjct: 61 DTADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFERLRSKGMKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLINRLAKKNIA+TG++PG+T +QQW+KVGK LELLDTPGILWPKF
| |
| Sbjct: 121 IRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+ +G +LA+TGAIKD ++ ++++A +GLRFLE+HYP+RL+ ++++ ED E
| |
| Sbjct: 181 EDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEKHYPDRLQNWLKVEKVSEDPIETLAF 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I EKRG L +Y + E ++R+IR +K GR+SF+ P
| |
| Sbjct: 241 IAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFP 280
| |
|
| |
|
| |
| >ref|NP_464797.1| hypothetical protein lmo1272 [Listeria monocytogenes EGD-e]
| |
| ref|ZP_00234964.1| GTPase family protein [Listeria monocytogenes str. 1/2a F6854]
| |
| emb|CAC99350.1| lmo1272 [Listeria monocytogenes]
| |
| gb|EAL05198.1| GTPase family protein [Listeria monocytogenes str. 1/2a F6854]
| |
| gb|EBA20273.1| GTPase family protein [Listeria monocytogenes J0161]
| |
| gb|EBA23719.1| GTPase family protein [Listeria monocytogenes 10403S]
| |
| gb|EBA26008.1| GTPase family protein [Listeria monocytogenes J2818]
| |
| gb|EBA32001.1| GTPase family protein [Listeria monocytogenes FSL N3-165]
| |
| gb|EBA34536.1| GTPase family protein [Listeria monocytogenes F6900]
| |
| Length = 287
| |
|
| |
| Score = 355 bits (910), Expect = 2e-096
| |
| Identities = 163/280 (58%), Positives = 227/280 (81%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREVTEKLKL+D+++ELVDARIP+SS NPM+E+I+ K R+++LNKA
| |
| Sbjct: 1 MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD T++W ++F +G+ ++++N+ G+GL +I A+++++ EKFDR+R+KG+KPRA
| |
| Sbjct: 61 DTADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLINRLAKKNIA+TG++PG+T +QQW+KVGK LELLDTPGILWPKF
| |
| Sbjct: 121 IRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+ +G +LA+TGAIKD ++ ++++A +GLRFLE HYP+RL+ ++ + ED E
| |
| Sbjct: 181 EDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLENHYPDRLQTWLKVETVSEDPIETLAF 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I EKRG L +Y + E ++R+IR +K GR+SF+ P
| |
| Sbjct: 241 IAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFP 280
| |
|
| |
|
| |
| >ref|YP_175781.1| GTPase [Bacillus clausii KSM-K16]
| |
| dbj|BAD64820.1| GTPase [Bacillus clausii KSM-K16]
| |
| Length = 288
| |
|
| |
| Score = 343 bits (879), Expect = 8e-093
| |
| Identities = 160/280 (57%), Positives = 215/280 (76%), Gaps = 2/280 (0%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQW+PGHMAKARRE+ EKLKLID+V ELVDAR+P SSRNP+I+++ + KPR+MLLNKAD
| |
| Sbjct: 3 TIQWYPGHMAKARREIKEKLKLIDVVIELVDARLPQSSRNPLIDELAQQKPRLMLLNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD A T++W+ F+ G L+IN+ G G+ I PA K + + + KG+KPR +
| |
| Sbjct: 63 LADPAETERWRAFFKRTGAEVLAINAQTGAGVKNIAPACKTLASALYQKWEQKGMKPRPL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RA+I+GIPNVGKSTLINRL K AK GDRPG+T QQW+KV +ELELLDTPGILWPKF+
| |
| Sbjct: 123 RAIILGIPNVGKSTLINRLVNKRQAKVGDRPGVTKQQQWIKVKQELELLDTPGILWPKFD 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE--DIAELFD 239
| |
| D+ VGLRLA TGAIKD +++ DVA + LR+L YP+ L+ RYG++ E D+ LF+
| |
| Sbjct: 183 DQEVGLRLAATGAIKDELLDYGDVAAYALRYLAAEYPDLLEARYGIERNSEEDDVVPLFE 242
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| AIG+KRGC++ GGL+++DKT E+I+R++R+ G+++ E+
| |
| Sbjct: 243 AIGKKRGCIVRGGLVDFDKTAELILRELRSGTIGKVTLEK 282
| |
|
| |
|
| |
| >ref|ZP_00540016.1| GTP-binding [Exiguobacterium sibiricum 255-15]
| |
| gb|EAM86851.1| GTP-binding [Exiguobacterium sibiricum 255-15]
| |
| Length = 288
| |
|
| |
| Score = 340 bits (873), Expect = 4e-092
| |
| Identities = 162/279 (58%), Positives = 220/279 (78%), Gaps = 2/279 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREVTEKLKLID+V ELVDAR+PMSSRNPM+E I KPR+++LNK+
| |
| Sbjct: 1 MTIQWFPGHMAKARREVTEKLKLIDVVIELVDARLPMSSRNPMVEQITAGKPRLIVLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D ADA +T++W G+ +++++ + +GL QI + ++++K DRMR KG P A
| |
| Sbjct: 61 DMADARLTEKWMHALRKDGVDVIAVDAKHSKGLGQIHEGALRLMKDKHDRMRDKGRNPSA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGK-ELELLDTPGILWPK 179
| |
| IRALIIGIPNVGKSTLINRLA +NIA TGDRPG+T QQW+K+ E+ELLDTPGILWPK
| |
| Sbjct: 121 IRALIIGIPNVGKSTLINRLAGRNIAITGDRPGVTKRQQWIKMKTGEMELLDTPGILWPK 180
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| F+D+LVG RLA TGAIKD I+N+ D+A+F +R L+ YPE+LK RY L ++ + E+ +
| |
| Sbjct: 181 FDDQLVGYRLAATGAIKDDILNIDDIALFAIRELKSRYPEQLKARYRLQDVSGEAVEVLE 240
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| AIG+ RG ++GG +++++T+E+++ ++RTEK GR++ E
| |
| Sbjct: 241 AIGKNRG-FVTGGYVDFERTSEMLLHELRTEKIGRVTLE 278
| |
|
| |
|
| |
| >ref|NP_692460.1| hypothetical protein OB1539 [Oceanobacillus iheyensis HTE831]
| |
| dbj|BAC13495.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
| |
| Length = 285
| |
|
| |
| Score = 335 bits (860), Expect = 1e-090
| |
| Identities = 155/280 (55%), Positives = 213/280 (76%), Gaps = 1/280 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKA+REV EKLKL+D V ELVDAR P+SS+NPM++ +L NKP++++L K
| |
| Sbjct: 1 MAIQWFPGHMAKAKREVEEKLKLVDFVIELVDARAPLSSQNPMLKQVLNNKPKLIVLMKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD VT++W + F G +++ +N + + +++ +K + Q+K ++++ KG++PR
| |
| Sbjct: 61 DLADQEVTKRWVDKFNEDGTQAIDVNVNHKGDIQKVIQQAKLLGQDKMEKLKRKGIQPRP 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| RA+I+GIPNVGKSTLINRLA K IAKTGDRPGIT Q W+KV K+ ELLDTPGILWPKF
| |
| Sbjct: 121 ARAMIVGIPNVGKSTLINRLANKKIAKTGDRPGITKQQLWIKVKKDFELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E+E+VG RLA G IKD ++ L DV F +R++ EHYP +LK+RY L+EI ED+ E+F++
| |
| Sbjct: 181 EEEVVGYRLAAIGTIKDQLLPLPDVTAFIIRYMSEHYPNQLKDRYQLEEI-EDMVEVFES 239
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG RG L SGG +NYDK +++IRD+R + G ++ EQP
| |
| Sbjct: 240 IGRIRGALESGGQVNYDKVADIVIRDLRVGRLGTITLEQP 279
| |
|
| |
|
| |
| >ref|ZP_00241305.1| GTPase of unknown function [Bacillus cereus G9241]
| |
| gb|EAL11078.1| GTPase of unknown function [Bacillus cereus G9241]
| |
| Length = 225
| |
|
| |
| Score = 332 bits (851), Expect = 1e-089
| |
| Identities = 158/222 (71%), Positives = 195/222 (87%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKARR+VTEKLKLID+V ELVDAR+P+SSRNPMI++I+ +KPR+++LNKA
| |
| Sbjct: 1 MVIQWFPGHMAKARRQVTEKLKLIDVVIELVDARLPLSSRNPMIDEIITHKPRLVVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T+QW +F+ +G ++SIN+ GQG+ +I A K +++EKFD+M AKG++PRA
| |
| Sbjct: 61 DMADDHLTKQWIAYFKEKGHMAISINAQAGQGMKEIAAACKVLVKEKFDKMVAKGIRPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRALI+GIPNVGKSTLIN+LAKKNIAKTGDRPG+TT+QQW+KVGKE+ELLDTPGILWPKF
| |
| Sbjct: 121 IRALIVGIPNVGKSTLINKLAKKNIAKTGDRPGVTTAQQWIKVGKEMELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLK 222
| |
| ED+LVGLRLA TGAIKDSI+NLQDVAV+ LRF E P +K
| |
| Sbjct: 181 EDQLVGLRLATTGAIKDSILNLQDVAVYALRFYGETLPRAIK 222
| |
|
| |
|
| |
| >ref|YP_253585.1| hypothetical protein SH1670 [Staphylococcus haemolyticus JCSC1435]
| |
| dbj|BAE04979.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
| |
| Length = 294
| |
|
| |
| Score = 330 bits (846), Expect = 5e-089
| |
| Identities = 155/279 (55%), Positives = 217/279 (77%), Gaps = 1/279 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+REVTE+LK +D+V+ELVDARIP SSRNPMI++++K KPR+++LNK
| |
| Sbjct: 1 MAIQWYPGHMAKAKREVTEQLKKVDVVFELVDARIPYSSRNPMIDEVIKQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D ++ Q+W+ F ++G +S+++ +G+ L + A+ +EKF+R +AKG+KPRA
| |
| Sbjct: 61 DMSNLNEMQKWESFFIDKGYYPVSVDAKHGKNLKGVETAAIAATKEKFEREKAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LA+KNIA+TG++PG+T QQW+KVG+ L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLARKNIAQTGNKPGVTKQQQWIKVGQSLQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD-EIPEDIAELFD 239
| |
| EDE+VG +L++TGAIKDSI++L +VA++GL+FL H E K+ Y +D +I E FD
| |
| Sbjct: 181 EDEIVGKKLSLTGAIKDSIVHLDEVAIYGLQFLINHDLEGFKQHYKIDVSADAEILEWFD 240
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| AIG +RG L G ++Y+ E+II D+R K G SF+
| |
| Sbjct: 241 AIGRRRGLLQRGNEVDYEAVIELIINDVRNAKIGTYSFD 279
| |
|
| |
|
| |
| >ref|NP_764476.1| hypothetical protein SE0921 [Staphylococcus epidermidis ATCC 12228]
| |
| gb|AAO04518.1|AE016747_15 conserved hypothetical protein [Staphylococcus epidermidis ATCC
| |
| 12228]
| |
| Length = 287
| |
|
| |
| Score = 327 bits (839), Expect = 3e-088
| |
| Identities = 151/279 (54%), Positives = 216/279 (77%), Gaps = 1/279 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+R+V+E+LK +D+V+ELVDARIP SSRNPMI+D++K KPR+++LNK
| |
| Sbjct: 1 MAIQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D + ++W+ +F+N+G +++++ +G+ L + + + QEKFDR +AKG+KPRA
| |
| Sbjct: 61 DMTNLKELEKWEIYFKNEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LAK++IA+TG++PG+T QQW+KVGK L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE-DIAELFD 239
| |
| EDE VG +L++TGAIKDSI++L +VA++GL F+ +H LK Y +D + +I + FD
| |
| Sbjct: 181 EDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFMIKHDVSALKRHYNIDTHEDAEILDWFD 240
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| AIG +RG L G ++Y+ E+II D+R K G F+
| |
| Sbjct: 241 AIGRRRGLLQKGNEVDYESVIELIINDMRNAKIGTYCFD 279
| |
|
| |
|
| |
| >ref|YP_188393.1| GTP-binding protein, putative [Staphylococcus epidermidis RP62A]
| |
| gb|AAW54149.1| GTP-binding protein, putative [Staphylococcus epidermidis RP62A]
| |
| Length = 287
| |
|
| |
| Score = 326 bits (836), Expect = 8e-088
| |
| Identities = 150/279 (53%), Positives = 216/279 (77%), Gaps = 1/279 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+R+V+E+LK +D+V+ELVDARIP SSRNPMI+D++K KPR+++LNK
| |
| Sbjct: 1 MAIQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D + ++W+ +F+++G +++++ +G+ L + + + QEKFDR +AKG+KPRA
| |
| Sbjct: 61 DMTNLKELEKWETYFKDEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LAK++IA+TG++PG+T QQW+KVGK L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE-DIAELFD 239
| |
| EDE VG +L++TGAIKDSI++L +VA++GL F+ +H LK Y +D + +I + FD
| |
| Sbjct: 181 EDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFMIKHDVSALKRHYNIDTHEDAEILDWFD 240
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| AIG +RG L G ++Y+ E+II D+R K G F+
| |
| Sbjct: 241 AIGRRRGLLQKGNEVDYESVIELIINDMRNAKIGTYCFD 279
| |
|
| |
|
| |
| >ref|NP_645943.1| hypothetical protein MW1126 [Staphylococcus aureus subsp. aureus
| |
| MW2]
| |
| ref|YP_043303.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
| |
| MSSA476]
| |
| dbj|BAB94991.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
| |
| MW2]
| |
| emb|CAG42954.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
| |
| MSSA476]
| |
| Length = 294
| |
|
| |
| Score = 324 bits (830), Expect = 4e-087
| |
| Identities = 155/280 (55%), Positives = 217/280 (77%), Gaps = 3/280 (1%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+REV+E+LK +D+V+ELVDARIP SSRNPMI++++ KPR+++LNK
| |
| Sbjct: 1 MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D ++ +W++ F ++G +S+++ +G+ L ++ A+ + EKF+R +AKG+KPRA
| |
| Sbjct: 61 DMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LAK++IA+TG++PG+T QQW+KVG L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED--IAELF 238
| |
| EDE VG +L++TGAIKDSI++L +VA++GL FL +H RLK Y + E+PED I F
| |
| Sbjct: 181 EDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFLIQHDLARLKSHYNI-EVPEDAEIIAWF 239
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| DAIG+KRG + G I+Y+ E+II DIR K G F+
| |
| Sbjct: 240 DAIGKKRGLIRRGNEIDYEAVIELIIYDIRNAKIGNYCFD 279
| |
|
| |
|
| |
| >ref|YP_186118.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus
| |
| COL]
| |
| ref|YP_493833.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
| |
| USA300]
| |
| ref|YP_499751.1| hypothetical protein SAOUHSC_01214 [Staphylococcus aureus subsp.
| |
| aureus NCTC 8325]
| |
| gb|AAW38092.1| GTP-binding protein, putative [Staphylococcus aureus subsp. aureus
| |
| COL]
| |
| gb|ABD22699.1| putative GTP-binding protein [Staphylococcus aureus subsp. aureus
| |
| USA300]
| |
| gb|ABD30319.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
| |
| NCTC 8325]
| |
| Length = 294
| |
|
| |
| Score = 321 bits (823), Expect = 2e-086
| |
| Identities = 154/280 (55%), Positives = 217/280 (77%), Gaps = 3/280 (1%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+REV+E+LK +D+V+ELVDARIP SSRNPMI++++ KPR+++LNK
| |
| Sbjct: 1 MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D ++ +W++ F ++G +S+++ +G+ L ++ A+ + EKF+R +AKG+KPRA
| |
| Sbjct: 61 DMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LAK++IA+TG++PG+T QQW+KVG L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED--IAELF 238
| |
| EDE VG +L++TGAIKDSI++L +VA++GL FL ++ RLK Y + E+PED I F
| |
| Sbjct: 181 EDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFLIQNDLARLKSHYNI-EVPEDAEIIAWF 239
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| DAIG+KRG + G I+Y+ E+II DIR K G F+
| |
| Sbjct: 240 DAIGKKRGLIRRGNEIDYEAVIELIIYDIRNAKIGNYCFD 279
| |
|
| |
|
| |
| >ref|NP_815362.1| GTPase of unknown function [Enterococcus faecalis V583]
| |
| gb|AAO81432.1| GTPase of unknown function [Enterococcus faecalis V583]
| |
| Length = 283
| |
|
| |
| Score = 320 bits (821), Expect = 4e-086
| |
| Identities = 156/281 (55%), Positives = 216/281 (76%), Gaps = 7/281 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREV+EK+K +DIV+ELVDAR+P+SSRNPM++ I++ KPR++LLNK
| |
| Sbjct: 1 MTIQWFPGHMAKARREVSEKIKYVDIVFELVDARLPLSSRNPMMDQIVQQKPRLVLLNKG 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD ++W+ +F+ +G ++L IN+ +G+N+IVPA+KE L+EK R +AKG+KPRA
| |
| Sbjct: 61 DLADNDQNKKWQHYFQKKGYQTLVINAQQNKGINKIVPAAKEALKEKLAREQAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+ IGIPNVGKSTL+NRL K IA+TG++PG+T QQW++ G +LELLDTPGILWPKF
| |
| Sbjct: 121 IRAMCIGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRSGSQLELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL--DEIPEDIAELF 238
| |
| EDE +G +LA+TGAIKD +++L D+A++GL F YP+RL ERYGL +E+ E
| |
| Sbjct: 181 EDEEIGKKLALTGAIKDQLLHLDDLAIYGLEFFARFYPQRLTERYGLTEEELFLPAPEQL 240
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| I +KRG +Y++ +E+II +IR+ K G + ++
| |
| Sbjct: 241 MLISQKRGF-----RDDYNRASEMIILEIRSGKLGTYTLDR 276
| |
|
| |
|
| |
| >ref|YP_416587.1| probable GTP-binding protein [Staphylococcus aureus RF122]
| |
| emb|CAI80796.1| probable GTP-binding protein [Staphylococcus aureus RF122]
| |
| Length = 294
| |
|
| |
| Score = 320 bits (820), Expect = 5e-086
| |
| Identities = 154/280 (55%), Positives = 217/280 (77%), Gaps = 3/280 (1%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+REV+E+LK +D+V+ELVDARIP SSRNPMI++++ KPR+++LNK
| |
| Sbjct: 1 MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D ++ +W++ F ++G +S+++ +G+ L ++ A+ + EKF+R +AKG+KPRA
| |
| Sbjct: 61 DMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LAK++IA+TG++PG+T QQW+KVG L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED--IAELF 238
| |
| EDE VG +L++TGAIKDSI++L +VA++GL FL ++ RLK Y + E+PED I F
| |
| Sbjct: 181 EDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFLIQNDLARLKAHYKI-EVPEDAEIIAWF 239
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| DAIG+KRG + G I+Y+ E+II DIR K G F+
| |
| Sbjct: 240 DAIGKKRGLIRCGNEIDYEAVIELIIYDIRNAKIGNYCFD 279
| |
|
| |
|
| |
| >ref|YP_040630.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
| |
| MRSA252]
| |
| emb|CAG40221.1| putative GTPase protein [Staphylococcus aureus subsp. aureus
| |
| MRSA252]
| |
| Length = 294
| |
|
| |
| Score = 320 bits (820), Expect = 5e-086
| |
| Identities = 154/280 (55%), Positives = 217/280 (77%), Gaps = 3/280 (1%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+REV+E+LK +D+V+ELVDARIP SSRNPMI++++ KPR+++LNK
| |
| Sbjct: 1 MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D ++ +W++ F ++G +S+++ +G+ L ++ A+ + EKF+R +AKG+KPRA
| |
| Sbjct: 61 DMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LAK++IA+TG++PG+T QQW+KVG L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVGNALQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED--IAELF 238
| |
| EDE VG +L++TGAIKDSI++L +VA++GL FL ++ RLK Y + E+PED I F
| |
| Sbjct: 181 EDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFLIQNDLARLKAHYKI-EVPEDAEIIAWF 239
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| DAIG+KRG + G I+Y+ E+II DIR K G F+
| |
| Sbjct: 240 DAIGKKRGLIRRGNEIDYEAVIELIIYDIRNAKIGNYCFD 279
| |
|
| |
|
| |
| >ref|ZP_00604104.1| GTP-binding protein [Enterococcus faecium DO]
| |
| gb|EAN09570.1| GTP-binding protein [Enterococcus faecium DO]
| |
| Length = 293
| |
|
| |
| Score = 320 bits (819), Expect = 7e-086
| |
| Identities = 157/281 (55%), Positives = 215/281 (76%), Gaps = 7/281 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQWFPGHMAKARREV+EK+K +DIV+ELVDAR+P+SSRNPM++ I++ KPR++LLNKA
| |
| Sbjct: 8 MTIQWFPGHMAKARREVSEKMKYVDIVFELVDARLPLSSRNPMLDQIIQQKPRLVLLNKA 67
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD T+ W+E+F QG +L+I + +G+ +VPA+KE L+EK R A+G+KPRA
| |
| Sbjct: 68 DLADPQQTKLWQEYFRKQGHLALAITAQESKGIKGLVPAAKEALKEKRARDAARGIKPRA 127
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+++GIPNVGKSTL+NRL K IA+TG++PG+T QQW+++G ELELLDTPGILWPKF
| |
| Sbjct: 128 IRAMVLGIPNVGKSTLMNRLVGKKIAQTGNKPGVTKGQQWLRLGNELELLDTPGILWPKF 187
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD-EIPEDIA-ELF 238
| |
| EDE +G +LA+TGAIKD +++L D+A++GL F +Y R+ +RYGL E E +A EL
| |
| Sbjct: 188 EDEEIGKKLALTGAIKDQLVHLDDLAIYGLDFFARYYSGRISDRYGLSIEQEEKLAPELL 247
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| I KRG +YD+ +E+++ DIR K GR + ++
| |
| Sbjct: 248 MDITAKRGYKE-----DYDRGSELVVHDIRQGKLGRYTLDR 283
| |
|
| |
|
| |
| >ref|NP_371767.1| similar to GTP-binding protein [Staphylococcus aureus subsp. aureus
| |
| Mu50]
| |
| ref|NP_374359.1| hypothetical protein SA1086 [Staphylococcus aureus subsp. aureus
| |
| N315]
| |
| ref|ZP_01240167.1| GTP-binding [Staphylococcus aureus subsp. aureus JH1]
| |
| ref|ZP_01242754.1| GTP-binding [Staphylococcus aureus subsp. aureus JH9]
| |
| dbj|BAB42338.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
| |
| N315]
| |
| dbj|BAB57405.1| similar to GTP-binding protein [Staphylococcus aureus subsp. aureus
| |
| Mu50]
| |
| gb|EAS51976.1| GTP-binding [Staphylococcus aureus subsp. aureus JH1]
| |
| gb|EAS54759.1| GTP-binding [Staphylococcus aureus subsp. aureus JH9]
| |
| Length = 294
| |
|
| |
| Score = 319 bits (817), Expect = 1e-085
| |
| Identities = 153/280 (54%), Positives = 216/280 (77%), Gaps = 3/280 (1%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+REV+E+LK +D+V+ELVDARIP SSRNPMI++++ KPR+++LNK
| |
| Sbjct: 1 MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVINQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D ++ +W++ F ++G +S+++ +G+ L ++ A+ + EKF+R +AKG+KPRA
| |
| Sbjct: 61 DMSNLNEMSKWEQFFIDKGYYPVSVDAKHGKNLKKVEAAAIKATAEKFEREKAKGLKPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LAK++IA+TG++PG+T QQW+KV L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLAKRSIAQTGNKPGVTKQQQWIKVSNALQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED--IAELF 238
| |
| EDE VG +L++TGAIKDSI++L +VA++GL FL ++ RLK Y + E+PED I F
| |
| Sbjct: 181 EDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFLIQNDLARLKSHYNI-EVPEDAEIIAWF 239
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| DAIG+KRG + G I+Y+ E+II DIR K G F+
| |
| Sbjct: 240 DAIGKKRGLIRRGNEIDYEAVIELIIYDIRNAKIGNYCFD 279
| |
|
| |
|
| |
| >ref|YP_301613.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
| |
| ATCC 15305]
| |
| dbj|BAE18668.1| putative GTPase [Staphylococcus saprophyticus subsp. saprophyticus
| |
| ATCC 15305]
| |
| Length = 286
| |
|
| |
| Score = 315 bits (808), Expect = 1e-084
| |
| Identities = 147/279 (52%), Positives = 215/279 (77%), Gaps = 1/279 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHMAKA+REV+E+LK +D+V+ELVDARIP SSRNPMI+++++ KPR+++LNK
| |
| Sbjct: 1 MVIQWYPGHMAKAKREVSEQLKKVDVVFELVDARIPYSSRNPMIDEVIQQKPRVVILNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D A+ ++W+ +F+ +G ++I++ +G+GL Q+ + + +EKF++ + KG+ PRA
| |
| Sbjct: 61 DMANLKELEKWESYFKEKGFYPVAIDAKHGKGLKQVEQTAIKATKEKFEKEKQKGLTPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKSTLIN+LA K+IAKTG+ PG+T QQW+KVG+ L+LLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTLINKLANKSIAKTGNTPGVTKQQQWIKVGQSLQLLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE-DIAELFD 239
| |
| ED+LVG +L+VTGAIKDSI++L +VA++ L F++ H + L + Y +D E + E FD
| |
| Sbjct: 181 EDQLVGKKLSVTGAIKDSIVHLDEVAIYALDFMKAHDYDGLIQHYKIDVSKEAENIEWFD 240
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| AIG +RG L G I+Y+ ++II ++R K G +F+
| |
| Sbjct: 241 AIGRRRGLLRRGNEIDYEAVIDLIIHEVRNAKIGTYTFD 279
| |
|
| |
|
| |
| >ref|YP_878280.1| GTP-binding protein, putative [Clostridium novyi NT]
| |
| gb|ABK60537.1| GTP-binding protein, putative [Clostridium novyi NT]
| |
| Length = 280
| |
|
| |
| Score = 308 bits (788), Expect = 3e-082
| |
| Identities = 147/280 (52%), Positives = 201/280 (71%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHMAK RRE+ E LK +D+V E+ DARI SS NP I+ I NK RI+LLNK+
| |
| Sbjct: 1 MAINWFPGHMAKTRREIKENLKFVDVVIEIRDARIVKSSANPDIDSICNNKSRIILLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D A+ +T+QW E N ++ LS+N V G+GLN I P E+L+EK DR+++KG+
| |
| Sbjct: 61 DLAEEKITRQWIEKLSNDSVKVLSVNCVTGKGLNNIKPTINELLKEKHDRLKSKGMVNIT 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| RA+++GIPNVGKS+ IN++AK N AK GDRPG+T ++QW+K +ELLDTPG+LWPKF
| |
| Sbjct: 121 TRAMVVGIPNVGKSSFINKMAKNNTAKVGDRPGVTKNKQWIKTKMGIELLDTPGVLWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDE VGL LA TGAIKD I++++ +A + L+E YPE+L ERY L+ + ED E D+
| |
| Sbjct: 181 EDESVGLDLAFTGAIKDEIMDIETLAFKLIGKLQEEYPEKLMERYKLNSLSEDTLENMDS 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG KRG ++SGG I+Y++ + +I+ + R K G +S E+P
| |
| Sbjct: 241 IGRKRGAVISGGNIDYNRVSVMILDEFRGGKLGPISLERP 280
| |
|
| |
|
| |
| >ref|NP_562623.1| hypothetical protein CPE1707 [Clostridium perfringens str. 13]
| |
| dbj|BAB81413.1| conserved hypothetical protein [Clostridium perfringens str. 13]
| |
| Length = 281
| |
|
| |
| Score = 299 bits (765), Expect = 1e-079
| |
| Identities = 142/280 (50%), Positives = 198/280 (70%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHM K +RE+ LKL+D V E+ DARIP SS+NP I+ + KPR++LLNK+
| |
| Sbjct: 1 MAINWFPGHMVKTKREIQNNLKLVDAVIEIRDARIPKSSKNPDIDTLCAGKPRVILLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D D VT+ WK+ N L +N++ G+GLN I PA ++L+EK DR++AKG+
| |
| Sbjct: 61 DLTDPKVTKAWKDSLTNDETIVLEVNALKGEGLNAIKPALLKLLKEKHDRLKAKGLAKIT 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| RA+++GIPNVGKST IN++AK NIAKTGDRPG+T ++QW+K +EL+DTPG+LWPKF
| |
| Sbjct: 121 TRAMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKTKLGIELMDTPGVLWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDE+VGL LA TGAIKD I++ +++A+ + L+E PE L RY L E+ E+ + DA
| |
| Sbjct: 181 EDEIVGLNLAFTGAIKDEIMDTEELALKLVERLQETNPEELMTRYKLTELHENPLDNLDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I KRG +MSG I+Y++ +I+ + R K G++S E+P
| |
| Sbjct: 241 IARKRGAIMSGNQIDYNRIAGIILDEFRGGKIGKISLEKP 280
| |
|
| |
|
| |
| >ref|ZP_00912049.1| GTP-binding [Clostridium beijerincki NCIMB 8052]
| |
| gb|EAP57354.1| GTP-binding [Clostridium beijerincki NCIMB 8052]
| |
| Length = 287
| |
|
| |
| Score = 298 bits (764), Expect = 2e-079
| |
| Identities = 139/280 (49%), Positives = 200/280 (71%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHM K +RE+ E LKL+D V E+ DARIP SS NP IE +L+ KPRI+LLNK+
| |
| Sbjct: 1 MAINWFPGHMKKTQREIKENLKLVDAVIEIRDARIPRSSANPDIEKLLEGKPRIILLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D D VT++W + ++ L +N + G GL I P +L+EK DR++AKG+
| |
| Sbjct: 61 DLTDGKVTKEWINYLTKDDVKVLEVNCLKGDGLKNIKPTLLALLKEKHDRLKAKGMVNIT 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +R +++GIPNVGKST IN++A+ NIAKTGDRPG+T S+QW+K G +E+LDTPG+LWP+F
| |
| Sbjct: 121 MRVMVVGIPNVGKSTFINKMARNNIAKTGDRPGVTKSKQWIKTGIGIEMLDTPGVLWPRF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+ L LA TGAIKD I++++++A+ + L+ +Y E+LKERY L E+ E+ + DA
| |
| Sbjct: 181 EDDETALNLAFTGAIKDEIMDIEELALKLVEKLQSNYEEKLKERYKLKEVFENPLDTLDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG+KRG L+SGG I+Y++ +++ + R K G ++ E+P
| |
| Sbjct: 241 IGKKRGTLISGGQIDYNRIAVILLDEFRGGKMGNITLERP 280
| |
|
| |
|
| |
| >ref|YP_001113390.1| GTP-binding protein, HSR1-related [Desulfotomaculum reducens MI-1]
| |
| gb|ABO50565.1| GTP-binding protein, HSR1-related [Desulfotomaculum reducens MI-1]
| |
| Length = 284
| |
|
| |
| Score = 298 bits (763), Expect = 2e-079
| |
| Identities = 136/280 (48%), Positives = 206/280 (73%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAKA+R+V + LKL+D+ +EL+DARIP+SS NPMI+ IL KPR+++LNK+D
| |
| Sbjct: 5 IQWFPGHMAKAKRQVQDALKLVDVAFELLDARIPVSSSNPMIDQILGQKPRVIILNKSDL 64
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD ++T+QW+ + I++++++++ G+GL ++ + ++ E+ ++ AKG +PRAIR
| |
| Sbjct: 65 ADPSITKQWQRALDRPYIKAIAVDTIKGEGLKEVPRVASMLVAEQMAKLAAKGRRPRAIR 124
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +++GIPNVGKST INRL + KTGD PG+T QQW++ LELLDTPGILWPKFED
| |
| Sbjct: 125 CMVLGIPNVGKSTFINRLVGRKATKTGDTPGVTKGQQWIRTQGSLELLDTPGILWPKFED 184
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| VG +LAVTGAIK+ + ++ +V++ L++L E+ PE+LKERY ++E+ + +L IG
| |
| Sbjct: 185 PEVGYKLAVTGAIKEQVFDIYEVSLKLLQWLAEYNPEKLKERYRMNELNPEATKLLWDIG 244
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| KRG L+SGGL++ K ++I+++ R GR + + P M
| |
| Sbjct: 245 VKRGLLVSGGLVDESKVAQLILKEFREGLLGRYTLDLPPM 284
| |
|
| |
|
| |
| >ref|YP_698994.1| GTPase of unknown function subfamily [Clostridium perfringens
| |
| SM101]
| |
| gb|ABG87334.1| GTPase of unknown function subfamily [Clostridium perfringens
| |
| SM101]
| |
| Length = 281
| |
|
| |
| Score = 298 bits (762), Expect = 3e-079
| |
| Identities = 141/280 (50%), Positives = 198/280 (70%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHM K +RE+ LKL+D V E+ DARIP SS+NP I+ + KPR++LLNK+
| |
| Sbjct: 1 MAINWFPGHMVKTKREIQNNLKLVDAVIEIRDARIPKSSKNPDIDTLCAGKPRVILLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D D VT+ WK+ N L +N++ G+GLN I PA ++L+EK DR++AKG+
| |
| Sbjct: 61 DLTDPKVTKAWKDSLTNDETIVLEVNALKGEGLNAIKPALLKLLKEKHDRLKAKGLAKIT 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| RA+++GIPNVGKST IN++AK NIAKTGDRPG+T ++QW+K +EL+DTPG+LWPKF
| |
| Sbjct: 121 TRAMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKTKLGIELMDTPGVLWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDE+VGL LA TGAIKD I++ +++A+ + L+E PE L RY L E+ E+ + DA
| |
| Sbjct: 181 EDEIVGLNLAFTGAIKDEIMDTEELALKLVERLQETNPEELMTRYKLTELHENPLDNLDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I KRG +M+G I+Y++ +I+ + R K G++S E+P
| |
| Sbjct: 241 IARKRGAIMAGNQIDYNRIAGIILDEFRGGKIGKISLEKP 280
| |
|
| |
|
| |
| >ref|YP_696394.1| GTP-binding protein [Clostridium perfringens ATCC 13124]
| |
| gb|ABG83247.1| GTP-binding protein [Clostridium perfringens ATCC 13124]
| |
| Length = 281
| |
|
| |
| Score = 298 bits (762), Expect = 3e-079
| |
| Identities = 141/280 (50%), Positives = 198/280 (70%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHM K +RE+ LKL+D V E+ DARIP SS+NP I+ + KPR++LLNK+
| |
| Sbjct: 1 MAINWFPGHMVKTKREIQNNLKLVDAVIEIRDARIPKSSKNPDIDTLCAGKPRVILLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D D VT+ WK+ N L +N++ G+GLN I PA ++L++K DR++AKG+
| |
| Sbjct: 61 DLTDPKVTKAWKDSLTNDETIVLEVNALKGEGLNAIKPALLKLLKDKHDRLKAKGLAKIT 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| RA+++GIPNVGKST IN++AK NIAKTGDRPG+T ++QW+K +EL+DTPG+LWPKF
| |
| Sbjct: 121 TRAMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKTKLGIELMDTPGVLWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDE+VGL LA TGAIKD I++ +++A+ + L+E PE L RY L E+ E+ + DA
| |
| Sbjct: 181 EDEIVGLNLAFTGAIKDEIMDTEELALKLVERLQETNPEELMTRYKLTELHENPLDNLDA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I KRG +MSG I+Y++ +I+ + R K G++S E+P
| |
| Sbjct: 241 IARKRGAIMSGNQIDYNRIAGIILDEFRGGKIGKISLEKP 280
| |
|
| |
|
| |
| >ref|NP_348387.1| Predicted GTPase, YLQF B.subtilis ortholog [Clostridium
| |
| acetobutylicum ATCC 824]
| |
| gb|AAK79727.1|AE007685_3 Predicted GTPase, YLQF B.subtilis ortholog [Clostridium
| |
| acetobutylicum ATCC 824]
| |
| Length = 283
| |
|
| |
| Score = 297 bits (760), Expect = 5e-079
| |
| Identities = 137/279 (49%), Positives = 204/279 (73%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| +I WFPGHMAK RE+ E LKL+D V E+ DARI SS NP I I K+KPRI+LLNK D
| |
| Sbjct: 5 SINWFPGHMAKTTREIRENLKLVDAVIEIRDARIVYSSSNPDINSICKDKPRIILLNKFD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| A+ ++T W + ++ IR++ +N++ G+GLN I PA E+L+ K D M AKG++ I
| |
| Sbjct: 65 LAEKSITDNWVKALSSESIRAIPVNALEGRGLNSIKPALNELLKPKLDNMAAKGIQNYII 124
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +++GIPNVGKS+ IN++AK +AK G++PG+T S+QW+K +EL+DTPG+LWPKF+
| |
| Sbjct: 125 RVMVVGIPNVGKSSFINKMAKNKVAKVGNKPGVTKSKQWIKTNIGIELMDTPGVLWPKFQ 184
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| D+ VGL LA TGAIKD I++++++A+ ++FL+++YPE+L ERY L++I ED + I
| |
| Sbjct: 185 DQKVGLNLAFTGAIKDEIMDIEELALKLVQFLQKNYPEKLMERYKLEDINEDPLINMNNI 244
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| KRG L+ GG I+Y++ + +I+ + R+ K G++S E+P
| |
| Sbjct: 245 AAKRGALLKGGEIDYNRVSIIIVDEFRSGKIGKISLERP 283
| |
|
| |
|
| |
| >ref|ZP_00779663.1| GTP-binding [Thermoanaerobacter ethanolicus ATCC 33223]
| |
| gb|EAO63740.1| GTP-binding [Thermoanaerobacter ethanolicus ATCC 33223]
| |
| Length = 277
| |
|
| |
| Score = 296 bits (758), Expect = 8e-079
| |
| Identities = 138/278 (49%), Positives = 205/278 (73%), Gaps = 2/278 (0%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGHMAK+++E+ LKL+D+VYE+VDARIP SSRNP I+DI+KNK RI+LLNKAD
| |
| Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRIILLNKADL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T W E+F+ +GI ++ +NS+ G GL +I A+ ++ Q+ ++ + KG+ PR +R
| |
| Sbjct: 62 ADDVITDLWIEYFKGKGIEAVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPR-LR 120
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +I+G+PNVGKST IN+L AKTGD+PG+T + W+K +LLDTPGILWPKF+D
| |
| Sbjct: 121 GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKT-PYFDLLDTPGILWPKFDD 179
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + VG+ LA+TGAIKD I++++++A+ + L+++YP L RY +D+I + EL IG
| |
| Sbjct: 180 KKVGIMLAITGAIKDEILDIEEIALNLVAILKKYYPNYLMSRYKIDKIVNEDFELLKEIG 239
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| +KRGCL++ G ++ KT+ +++ D R K GR+S E+P
| |
| Sbjct: 240 KKRGCLLARGEVDTLKTSHILLEDFRKGKLGRISLERP 277
| |
|
| |
|
| |
| >ref|ZP_01455389.1| GTP-binding [Thermoanaerobacter ethanolicus X514]
| |
| gb|EAU56818.1| GTP-binding [Thermoanaerobacter ethanolicus X514]
| |
| Length = 277
| |
|
| |
| Score = 295 bits (756), Expect = 1e-078
| |
| Identities = 137/278 (49%), Positives = 205/278 (73%), Gaps = 2/278 (0%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGHMAK+++E+ LKL+D+VYE+VDARIP SSRNP I+DI+KNK R++LLNKAD
| |
| Sbjct: 2 IQWYPGHMAKSKKEIVSNLKLVDVVYEIVDARIPKSSRNPDIDDIVKNKKRLILLNKADL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T W E+F+ +GI ++ +NS+ G GL +I A+ ++ Q+ ++ + KG+ PR +R
| |
| Sbjct: 62 ADDVITDLWIEYFKGKGIEAVKVNSITGFGLKEINEATNKVCQDILEKKKQKGMIPR-LR 120
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +I+G+PNVGKST IN+L AKTGD+PG+T + W+K +LLDTPGILWPKF+D
| |
| Sbjct: 121 GMIVGVPNVGKSTFINKLIGSKRAKTGDKPGVTRALHWIKT-PYFDLLDTPGILWPKFDD 179
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + VG+ LA+TGAIKD I++++++A+ + L+++YP L RY +D+I + EL IG
| |
| Sbjct: 180 KKVGIMLAITGAIKDEILDIEEIALNLVAILKKYYPNYLMSRYKIDKIVNEDFELLKEIG 239
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| +KRGCL++ G ++ KT+ +++ D R K GR+S E+P
| |
| Sbjct: 240 KKRGCLLARGEVDTLKTSHILLEDFRKGKLGRISLERP 277
| |
|
| |
|
| |
| >ref|YP_001037191.1| GTP-binding protein [Clostridium thermocellum ATCC 27405]
| |
| gb|ABN51998.1| GTP-binding protein [Clostridium thermocellum ATCC 27405]
| |
| Length = 291
| |
|
| |
| Score = 294 bits (752), Expect = 4e-078
| |
| Identities = 136/281 (48%), Positives = 204/281 (72%), Gaps = 1/281 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAK RR + E LK++D+V EL+DARIP SS+NP I+ I+KNKP+I++LNKA
| |
| Sbjct: 1 MNIQWFPGHMAKTRRILAENLKMVDVVVELLDARIPASSKNPEIDGIVKNKPKIVVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD ++ +W + + +QG ++ I+S+ G G+ Q+ ++I++++ +R R +G R
| |
| Sbjct: 61 DLADEKISNEWSKWYNSQGYATIFIDSIKGTGIKQLKDQMRDIMKDRIERDRQRGRIFRP 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPNVGKS+LIN++A K A TGDRPG+T ++QW+ V E++L+DTPGILWPKF
| |
| Sbjct: 121 IRTMIVGIPNVGKSSLINKIAGKKSAVTGDRPGVTRNKQWINVNNEIQLMDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIA-ELFD 239
| |
| ED+ VG+ LAVTGAIKD II+ ++A L L + YPE +K+RY L+ + + EL +
| |
| Sbjct: 181 EDKTVGINLAVTGAIKDEIIDTVELASILLEHLSKTYPENIKKRYKLESLQDKKGYELLE 240
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| G+KRGC++SGG ++ + +++ + R K GR++ E+P
| |
| Sbjct: 241 EAGKKRGCIISGGEVDLTRIAAIVLDEFRGGKIGRITLERP 281
| |
|
| |
|
| |
| >ref|NP_623074.1| predicted GTPase [Thermoanaerobacter tengcongensis MB4]
| |
| gb|AAM24678.1| predicted GTPases [Thermoanaerobacter tengcongensis MB4]
| |
| Length = 277
| |
|
| |
| Score = 292 bits (747), Expect = 2e-077
| |
| Identities = 136/278 (48%), Positives = 199/278 (71%), Gaps = 2/278 (0%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGHMAKA++E+ LKL+D+VYE+VDARIP SSRNP ++I K K +IMLLNK D
| |
| Sbjct: 2 IQWYPGHMAKAKKEIISNLKLVDVVYEIVDARIPRSSRNPDFDEITKRKKKIMLLNKEDL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T W +HF+ +GI ++ +N++ G+G ++ +KE+ ++ + KG+ PR +R
| |
| Sbjct: 62 ADERITDLWIKHFKEKGIEAVKVNAITGKGFKELEEKTKEVCKDILEAKVKKGLTPR-LR 120
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +I+GIPNVGKST IN L + AKTGD+PG+T S W++ L+LLDTPG+LWPKFED
| |
| Sbjct: 121 GMILGIPNVGKSTFINTLIGRKKAKTGDKPGVTKSLHWIRT-PYLDLLDTPGVLWPKFED 179
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + G LA+TGAIKD I+ +++VA+F + L+ YP+ L RY LD+I E+ ++ + IG
| |
| Sbjct: 180 KTTGFMLAITGAIKDEILEMEEVALFLVSILKNRYPDYLINRYKLDKIWEEEIKIIEDIG 239
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| +KRGCL+SGG +++ K + V++ D R GR+S E+P
| |
| Sbjct: 240 KKRGCLVSGGEVDFVKASTVLLEDFRKGNLGRISLEEP 277
| |
|
| |
|
| |
| >ref|ZP_01575477.1| GTP-binding [Clostridium cellulolyticum H10]
| |
| gb|EAV70398.1| GTP-binding [Clostridium cellulolyticum H10]
| |
| Length = 292
| |
|
| |
| Score = 291 bits (746), Expect = 2e-077
| |
| Identities = 140/285 (49%), Positives = 201/285 (70%), Gaps = 7/285 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAK RR + E LKL+D++ EL+DARIP SSRNP I ++KNKPR++ NK+
| |
| Sbjct: 1 MNIQWFPGHMAKTRRLIAENLKLVDVIIELLDARIPFSSRNPEINSLIKNKPRLVAFNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +++QW + + +QGI + INS+NG+GLN+I ++E++ EK +R RAKG
| |
| Sbjct: 61 DLADERISRQWIKWYADQGIDCILINSINGKGLNEIKAKARELMFEKIERNRAKGKLFTP 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +R +++GIPNVGKS+ IN++ K A TGDRPG+T +QW+++ E+ELLDTPGILWPKF
| |
| Sbjct: 121 VRTMVVGIPNVGKSSFINKIVGKATAVTGDRPGVTRGKQWIRISSEMELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI-----A 235
| |
| ED+ VG+ LA TGAIKD I++ +VA+ L L + Y L R+ L+ PE I
| |
| Sbjct: 181 EDQEVGMNLAFTGAIKDDIMDTGEVAMALLYRLSKTYNNELCTRFKLE--PESINGMEPL 238
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| EL + +G KRGC++S G I+Y + + +++ + R K GR++ E+P
| |
| Sbjct: 239 ELLETVGRKRGCIISKGEIDYSRISAIVLDEFRGGKIGRITLEKP 283
| |
|
| |
|
| |
| >ref|YP_139375.1| GTP-binding protein [Streptococcus thermophilus LMG 18311]
| |
| ref|YP_141296.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066]
| |
| gb|AAV60560.1| GTP-binding protein [Streptococcus thermophilus LMG 18311]
| |
| gb|AAV62481.1| GTP-binding protein [Streptococcus thermophilus CNRZ1066]
| |
| Length = 284
| |
|
| |
| Score = 291 bits (746), Expect = 2e-077
| |
| Identities = 141/281 (50%), Positives = 203/281 (72%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E LK +D V LVDAR+P+SS+NPM+ I+ +KP+I++LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKILILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W+ +FE+QGI++L+INS + + A+K ++ EK R+R +G++ +
| |
| Sbjct: 63 LADDNRTKEWRTYFESQGIKTLAINSKEQSTVKLVTDAAKSLMTEKIQRLRERGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K K+LE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERY-GLD---EIPEDIAEL 237
| |
| DELVGL+LA+TGAIKD ++ + +V +FGL + + +YPERL+ER+ G+D E PE I E+
| |
| Sbjct: 183 DELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTYYPERLEERFKGIDLEEEAPEIIMEM 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| +G + +YD+ + ++D+R K GR + +
| |
| Sbjct: 243 TRKLGFRE---------DYDRFYNLFVKDVRDGKLGRYTLD 274
| |
|
| |
|
| |
| >ref|YP_820340.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
| |
| gb|ABJ66144.1| Predicted GTPase [Streptococcus thermophilus LMD-9]
| |
| Length = 284
| |
|
| |
| Score = 291 bits (746), Expect = 2e-077
| |
| Identities = 141/281 (50%), Positives = 203/281 (72%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E LK +D V LVDAR+P+SS+NPM+ I+ +KP+I++LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKILILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W+ +FE+QGI++L+INS + + A+K ++ EK R+R +G++ +
| |
| Sbjct: 63 LADDNRTKEWRTYFESQGIKTLAINSKEQSTVKLVTDAAKSLMTEKIQRLRERGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K K+LE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERY-GLD---EIPEDIAEL 237
| |
| DELVGL+LA+TGAIKD ++ + +V +FGL + + +YPERL+ER+ G+D E PE I E+
| |
| Sbjct: 183 DELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTYYPERLEERFKGIDLEEEAPEIIMEM 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| +G + +YD+ + ++D+R K GR + +
| |
| Sbjct: 243 TRKLGFRE---------DYDRFYNLFVKDVRDGKLGRYTLD 274
| |
|
| |
|
| |
| >ref|ZP_01665615.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
| |
| Nor1]
| |
| gb|EAX48694.1| GTP-binding protein, HSR1-related [Thermosinus carboxydivorans
| |
| Nor1]
| |
| Length = 287
| |
|
| |
| Score = 290 bits (743), Expect = 5e-077
| |
| Identities = 134/281 (47%), Positives = 198/281 (70%), Gaps = 1/281 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHMAKA + + E LKL+D+V EL+DARIP+SS NP+I +++ NKPR++ LNKA
| |
| Sbjct: 1 MHIHWFPGHMAKAYKMIREHLKLVDVVIELLDARIPLSSANPVIHELVGNKPRVIALNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D A+ T++W + QG+ ++ + +V+G+G+ ++ + ++ K + AKG++ R
| |
| Sbjct: 61 DLAEPQWTERWIAEYRRQGLAAVPLEAVSGKGVKTLIVQVETAVRPKLKALEAKGIQGRT 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +RA+I+GIPNVGKS+LINRL + +TGDRPG+T QQW+K+GK LELLDTPG+LWPKF
| |
| Sbjct: 121 VRAIILGIPNVGKSSLINRLLGAAVVRTGDRPGVTRGQQWIKIGKNLELLDTPGVLWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD-EIPEDIAELFD 239
| |
| +D+ V +LA+TGAI + + +++ VA L L Y ERL ER+ L +PED A L D
| |
| Sbjct: 181 DDQEVAFKLAITGAIHEDVYDVEAVATKLLHMLRSCYTERLVERFKLSPPLPEDAAALLD 240
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG KRGCL +GG+++++K +I+ + RT K G + + P
| |
| Sbjct: 241 LIGSKRGCLRAGGIVDHEKVRRIILTEFRTGKLGPFTLDYP 281
| |
|
| |
|
| |
| >ref|YP_001128467.1| putative GTPase protein [Streptococcus pyogenes str. Manfredo]
| |
| emb|CAM30236.1| putative GTPase protein [Streptococcus pyogenes str. Manfredo]
| |
| Length = 282
| |
|
| |
| Score = 290 bits (742), Expect = 6e-077
| |
| Identities = 139/282 (49%), Positives = 202/282 (71%), Gaps = 13/282 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| ADA T++WK ++E+QGI++L+INS + ++ A+KE++ +K R+R +G++ +
| |
| Sbjct: 63 LADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKLQRLRERGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG----LDEIPEDIAEL 237
| |
| DELVGL+LA+TGAIKD ++ + +V +FGL + + HYP RL +R+ +E PE I L
| |
| Sbjct: 183 DELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIMTL 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +G K +YD+ + ++++R K G+ + +Q
| |
| Sbjct: 243 TRQLGFKD---------DYDRFYTLFVKEVRDGKLGQYTLDQ 275
| |
|
| |
|
| |
| >ref|YP_280324.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
| |
| ref|YP_596731.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
| |
| ref|YP_600552.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
| |
| gb|AAX71969.1| GTP-binding protein [Streptococcus pyogenes MGAS6180]
| |
| gb|ABF32187.1| GTP-binding protein [Streptococcus pyogenes MGAS9429]
| |
| gb|ABF36008.1| GTP-binding protein [Streptococcus pyogenes MGAS2096]
| |
| Length = 282
| |
|
| |
| Score = 290 bits (742), Expect = 6e-077
| |
| Identities = 139/282 (49%), Positives = 202/282 (71%), Gaps = 13/282 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| ADA T++WK ++E+QGI++L+INS + ++ A+KE++ +K R+R +G++ +
| |
| Sbjct: 63 LADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIQRLRERGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG----LDEIPEDIAEL 237
| |
| DELVGL+LA+TGAIKD ++ + +V +FGL + + HYP RL +R+ +E PE I L
| |
| Sbjct: 183 DELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIMTL 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +G K +YD+ + ++++R K G+ + +Q
| |
| Sbjct: 243 TRQLGFKD---------DYDRFYTLFVKEVRDGKLGQYTLDQ 275
| |
|
| |
|
| |
| >ref|NP_607243.1| hypothetical protein spyM18_1121 [Streptococcus pyogenes MGAS8232]
| |
| ref|YP_602525.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
| |
| gb|AAL97742.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
| |
| gb|ABF37981.1| GTP-binding protein [Streptococcus pyogenes MGAS10750]
| |
| Length = 282
| |
|
| |
| Score = 289 bits (739), Expect = 1e-076
| |
| Identities = 139/281 (49%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM+KARR+V E LK +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 4 IQWFPGHMSKARRQVQENLKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| ADA T++WK ++E+QGI++L+INS + ++ A+KE++ +K R+R +G++ +R
| |
| Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFED
| |
| Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG----LDEIPEDIAELF 238
| |
| ELVGL+LA+TGAIKD ++ + +V +FGL + + HYP RL +R+ +E PE I L
| |
| Sbjct: 184 ELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIMTLT 243
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +G K +YD+ + ++++R K G+ + +Q
| |
| Sbjct: 244 RQLGFKD---------DYDRFYSLFVKEVRDGKLGQYTLDQ 275
| |
|
| |
|
| |
| >ref|YP_060196.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
| |
| gb|AAT87013.1| GTP-binding protein [Streptococcus pyogenes MGAS10394]
| |
| Length = 282
| |
|
| |
| Score = 288 bits (737), Expect = 2e-076
| |
| Identities = 138/281 (49%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| ADA T++WK ++E+QGI++L+INS + ++ A+KE++ +K R+R +G++ +R
| |
| Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIQRLRERGIQKETLR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFED
| |
| Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG----LDEIPEDIAELF 238
| |
| ELVGL+LA+TGAIKD ++ + +V +FGL + + HYP RL +R+ +E PE I L
| |
| Sbjct: 184 ELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIMTLT 243
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +G K +YD+ + ++++R K G+ + +Q
| |
| Sbjct: 244 RQLGFKD---------DYDRFYTLFVKEVRDGKLGQYTLDQ 275
| |
|
| |
|
| |
| >ref|NP_269311.1| hypothetical protein SPy1161 [Streptococcus pyogenes M1 GAS]
| |
| ref|YP_282245.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
| |
| gb|AAK34032.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
| |
| gb|AAZ51500.1| GTP-binding protein [Streptococcus pyogenes MGAS5005]
| |
| Length = 282
| |
|
| |
| Score = 288 bits (736), Expect = 3e-076
| |
| Identities = 138/281 (49%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| ADA T++WK ++E+QGI++L+INS + ++ A+KE++ +K R+R +G++ +R
| |
| Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIQRLRERGIQKETLR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFED
| |
| Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG----LDEIPEDIAELF 238
| |
| ELVGL+LA+TGAIKD ++ + +V +FGL + E+YP RL +R+ +E PE I L
| |
| Sbjct: 184 ELVGLKLALTGAIKDQLLPMDEVTIFGLNYFREYYPNRLTKRFKNIPLEEEAPEIIMTLT 243
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +G K +YD+ + ++++R K G+ + +Q
| |
| Sbjct: 244 RQLGFKD---------DYDRFYTLFVKEVRDGKLGQYTLDQ 275
| |
|
| |
|
| |
| >ref|NP_664621.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
| |
| ref|NP_802280.1| hypothetical protein SPs1018 [Streptococcus pyogenes SSI-1]
| |
| gb|AAM79424.1| putative GTP-binding protein [Streptococcus pyogenes MGAS315]
| |
| dbj|BAC64113.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
| |
| Length = 282
| |
|
| |
| Score = 288 bits (736), Expect = 3e-076
| |
| Identities = 138/281 (49%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| ADA T++WK ++E+QGI++L+INS + ++ A+KE++ +K R+R +G++ +R
| |
| Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELIADKIKRLRDRGIQKETLR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFED
| |
| Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG----LDEIPEDIAELF 238
| |
| ELVGL+LA+TGAIKD ++ + +V +FGL + + HYP RL +R+ +E PE I L
| |
| Sbjct: 184 ELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIMTLT 243
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +G K +YD+ + ++++R K G+ + +Q
| |
| Sbjct: 244 RQLGFKD---------DYDRFYSLFVKEVRDGKLGQYTLDQ 275
| |
|
| |
|
| |
| >ref|YP_598605.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
| |
| gb|ABF34061.1| GTP-binding protein [Streptococcus pyogenes MGAS10270]
| |
| Length = 282
| |
|
| |
| Score = 287 bits (735), Expect = 4e-076
| |
| Identities = 138/281 (49%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 4 IQWFPGHMSKARRQVQENVKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKADL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| ADA T++WK ++E+QGI++L+INS + ++ A+KE++ +K R+R +G++ +R
| |
| Sbjct: 64 ADATRTKEWKAYYESQGIKTLAINSKEQSTVKKVTEAAKELMADKIKRLRDRGIQKETLR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFED
| |
| Sbjct: 124 TMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFED 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG----LDEIPEDIAELF 238
| |
| ELVGL+LA+TGAIKD ++ + +V +FGL + + HYP RL +R+ +E PE I L
| |
| Sbjct: 184 ELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTHYPSRLTKRFKNIPLEEEAPEIIMTLT 243
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +G K +YD+ + ++++R K G+ + +Q
| |
| Sbjct: 244 RQLGFKD---------DYDRFYTLFVKEVRDGKLGQYTLDQ 275
| |
|
| |
|
| |
| >ref|NP_735497.1| hypothetical protein gbs1048 [Streptococcus agalactiae NEM316]
| |
| ref|ZP_00780513.1| GTP-binding protein [Streptococcus agalactiae 18RS21]
| |
| ref|ZP_00786874.1| GTP-binding protein [Streptococcus agalactiae CJB111]
| |
| ref|ZP_00789948.1| GTP-binding protein [Streptococcus agalactiae 515]
| |
| emb|CAD46707.1| Unknown [Streptococcus agalactiae NEM316]
| |
| gb|EAO62886.1| GTP-binding protein [Streptococcus agalactiae 18RS21]
| |
| gb|EAO71326.1| GTP-binding protein [Streptococcus agalactiae 515]
| |
| gb|EAO74411.1| GTP-binding protein [Streptococcus agalactiae CJB111]
| |
| Length = 283
| |
|
| |
| Score = 285 bits (730), Expect = 1e-075
| |
| Identities = 131/277 (47%), Positives = 201/277 (72%), Gaps = 5/277 (1%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W++ +E+QG+++L+INS + ++ +K ++ +K ++R +G++ +
| |
| Sbjct: 63 LADPIRTKEWRDFYESQGLKTLAINSKEQSTVKKVTDIAKILMSDKIAKLRGRGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| DELVGL+LA+TGAIKD ++ + +V +FGL + + +YP+RLKER+ + ++ E+ A+
| |
| Sbjct: 183 DELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTYYPDRLKERFKSINLEDEAPEIIMAL 242
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| +K G +YD+ + ++++R K GR + +
| |
| Sbjct: 243 TQKLGY-----RDDYDRFYNLFVKEVRDGKLGRYTLD 274
| |
|
| |
|
| |
| >ref|ZP_01355053.1| GTP-binding [Clostridium phytofermentans ISDg]
| |
| gb|EAT21514.1| GTP-binding [Clostridium phytofermentans ISDg]
| |
| Length = 292
| |
|
| |
| Score = 285 bits (728), Expect = 3e-075
| |
| Identities = 136/281 (48%), Positives = 191/281 (67%), Gaps = 1/281 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M QW+PGHM KA+R++ E +KLID+V ELVDARIP SS+NP I+D+ KNK RI+LLNK
| |
| Sbjct: 1 MHFQWYPGHMTKAKRQMQEDIKLIDVVIELVDARIPYSSKNPDIDDLAKNKSRIILLNKY 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T WK ++E +G +NS NG G+ + K+ QEK +R R +G+ R
| |
| Sbjct: 61 DLADQKMTDAWKSYYEKKGWFVALVNSRNGSGVKNVHEVIKQACQEKIERDRKRGILNRP 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+I+GIPNVGKST IN A K KTG++PG+T +QW+K+ K +ELLDTPGILWPKF
| |
| Sbjct: 121 IRAMIVGIPNVGKSTFINSFAGKACTKTGNKPGVTKGKQWIKLNKNVELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED++VG+R+A G+I D I+N +D+ + +L YP L E+YG++E+ +I L D
| |
| Sbjct: 181 EDQVVGMRIAFIGSINDDILNPRDLCYELIEYLHRVYPGVLGEKYGMEEVDSNIENL-DL 239
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPT 281
| |
| I +KR CL+ GG ++ K ++ D R + R++ E P+
| |
| Sbjct: 240 IAKKRACLLKGGELDLVKAANFVLDDFRNGRIARITLEHPS 280
| |
|
| |
|
| |
| >ref|NP_688024.1| GTP-binding protein [Streptococcus agalactiae 2603V/R]
| |
| gb|AAM99896.1|AE014238_9 GTP-binding protein [Streptococcus agalactiae 2603V/R]
| |
| Length = 283
| |
|
| |
| Score = 285 bits (728), Expect = 3e-075
| |
| Identities = 131/277 (47%), Positives = 200/277 (72%), Gaps = 5/277 (1%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W++ +E+QG+++L+INS + ++ +K ++ +K +R +G++ +
| |
| Sbjct: 63 LADPIRTKEWRDFYESQGLKTLAINSKEQSTVKKVTDIAKILMSDKIANLRGRGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| DELVGL+LA+TGAIKD ++ + +V +FGL + + +YP+RLKER+ + ++ E+ A+
| |
| Sbjct: 183 DELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTYYPDRLKERFKSINLEDEAPEIIMAL 242
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| +K G +YD+ + ++++R K GR + +
| |
| Sbjct: 243 TQKLGY-----RDDYDRFYNLFVKEVRDGKLGRYTLD 274
| |
|
| |
|
| |
| >ref|NP_781884.1| GTP-binding protein [Clostridium tetani E88]
| |
| gb|AAO35821.1| GTP-binding protein [Clostridium tetani E88]
| |
| Length = 298
| |
|
| |
| Score = 284 bits (727), Expect = 3e-075
| |
| Identities = 139/280 (49%), Positives = 197/280 (70%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHMAK RRE+ E LK++D + E+ DARI SS NP IE+I NKPRI+LLNK+
| |
| Sbjct: 18 MDINWFPGHMAKTRRELKENLKMVDAIIEIRDARIVKSSANPEIENICGNKPRIILLNKS 77
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D + VT +W + + + ++INS+ G+ +I A ++L+EK ++++AKG+K
| |
| Sbjct: 78 DLGEEKVTNEWIKALSGENTKVIAINSLKDSGMKKIKNAIDDLLKEKTEKLKAKGLKNIV 137
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| R +++GIPNVGKST INR+AK +IAKTGDRPG+T S+QW+K +EL+DTPGILWPKF
| |
| Sbjct: 138 NRVMVVGIPNVGKSTFINRMAKSSIAKTGDRPGVTKSRQWIKTKIGVELMDTPGILWPKF 197
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDE VGL LA TGAIKD I++++ +A+ + L E Y E LKERY LD++ E + +
| |
| Sbjct: 198 EDEKVGLNLAFTGAIKDEIMDIETLALNLIERLSEDYGENLKERYKLDKLEEIPLDNMEN 257
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I +KRG ++ G I+Y++ +I+ + R K GR+S E+P
| |
| Sbjct: 258 IAKKRGAILGRGEIDYNRVAIMILDEFRGGKLGRISLEKP 297
| |
|
| |
|
| |
| >ref|YP_329729.1| GTP-binding protein [Streptococcus agalactiae A909]
| |
| ref|ZP_00784017.1| GTP-binding protein [Streptococcus agalactiae H36B]
| |
| gb|ABA45023.1| GTP-binding protein [Streptococcus agalactiae A909]
| |
| gb|EAO77244.1| GTP-binding protein [Streptococcus agalactiae H36B]
| |
| Length = 283
| |
|
| |
| Score = 284 bits (726), Expect = 4e-075
| |
| Identities = 134/281 (47%), Positives = 200/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W++ +E+QG+++L+INS + ++ +K ++ +K ++R +G++ +
| |
| Sbjct: 63 LADPIRTKEWRDFYESQGLKTLAINSKEQSTVKKVTDIAKILMSDKIAKLRERGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL----DEIPEDIAEL 237
| |
| DELVGL+LA+TGAIKD ++ + +V +FGL + + +YP+RLKER+ DE PE I L
| |
| Sbjct: 183 DELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTYYPDRLKERFKSINLEDEAPEIIMTL 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| +G + +YD+ + ++++R K GR + +
| |
| Sbjct: 243 TQKLGYRD---------DYDRFYNLFVKEVRDGKLGRYTLD 274
| |
|
| |
|
| |
| >ref|ZP_00784818.1| GTP-binding protein [Streptococcus agalactiae COH1]
| |
| gb|EAO76456.1| GTP-binding protein [Streptococcus agalactiae COH1]
| |
| Length = 283
| |
|
| |
| Score = 283 bits (725), Expect = 6e-075
| |
| Identities = 134/281 (47%), Positives = 200/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W++ +E+QG+++L+INS + ++ +K ++ +K ++R +G++ +
| |
| Sbjct: 63 LADPIRTKEWRDFYESQGLKTLAINSKEQSTVKKVTDIAKILMSDKIAKLRERGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K KELE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKELEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL----DEIPEDIAEL 237
| |
| DELVGL+LA+TGAIKD ++ + +V +FGL + + +YP+RLKER+ DE PE I L
| |
| Sbjct: 183 DELVGLKLALTGAIKDQLLPMDEVTIFGLNYFKTYYPDRLKERFKSINLEDESPEIIMTL 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| +G + +YD+ + ++++R K GR + +
| |
| Sbjct: 243 TQKLGYRD---------DYDRFYNLFVKEVRDGKLGRYTLD 274
| |
|
| |
|
| |
| >ref|NP_358637.1| hypothetical protein spr1043 [Streptococcus pneumoniae R6]
| |
| ref|YP_816493.1| GTP-binding protein [Streptococcus pneumoniae D39]
| |
| gb|AAK99847.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
| |
| gb|ABJ53742.1| GTP-binding protein [Streptococcus pneumoniae D39]
| |
| Length = 283
| |
|
| |
| Score = 282 bits (722), Expect = 1e-074
| |
| Identities = 132/281 (46%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E LK +D V LVDAR+P+SS+NPM+ I+ +KP++++LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD A+T++W+++FE+QGI++L+INS + + A+K+++ +K R + +G++ +
| |
| Sbjct: 63 LADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K K+LE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL----DEIPEDIAEL 237
| |
| DE V L+LA+TGAIKD ++ + +V +FG+ + +EHYPE+L ER+ +E P I ++
| |
| Sbjct: 183 DETVALKLALTGAIKDQLLPMDEVTIFGINYFKEHYPEKLAERFKQMKIEEEAPVIIIDM 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| A+G + +YD+ + ++++R K G + +
| |
| Sbjct: 243 TRALGFRD---------DYDRFYSLFVKEVRDGKLGNYTLD 274
| |
|
| |
|
| |
| >ref|NP_345624.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
| |
| ref|ZP_01408995.1| hypothetical protein SpneT_02000534 [Streptococcus pneumoniae
| |
| TIGR4]
| |
| gb|AAK75264.1| GTP-binding protein [Streptococcus pneumoniae TIGR4]
| |
| Length = 283
| |
|
| |
| Score = 282 bits (722), Expect = 1e-074
| |
| Identities = 132/281 (46%), Positives = 201/281 (71%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E LK +D V LVDAR+P+SS+NPM+ I+ +KP++++LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD A+T++W+++FE+QGI++L+INS + + A+K+++ +K R + +G++ +
| |
| Sbjct: 63 LADPAMTKEWRQYFESQGIQTLAINSKEQVTVKVVTDAAKKLMADKIARQKERGIQIETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K K+LE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKTNKDLEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL----DEIPEDIAEL 237
| |
| DE V L+LA+TGAIKD ++ + +V +FG+ + +EHYPE+L ER+ +E P I ++
| |
| Sbjct: 183 DETVALKLALTGAIKDQLLPMDEVTIFGINYFKEHYPEKLAERFKQMKIEEEAPVIIMDM 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| A+G + +YD+ + ++++R K G + +
| |
| Sbjct: 243 TRALGFRD---------DYDRFYSLFVKEVRDGKLGNYTLD 274
| |
|
| |
|
| |
| >ref|ZP_00875787.1| GTP-binding [Streptococcus suis 89/1591]
| |
| gb|EAP40047.1| GTP-binding [Streptococcus suis 89/1591]
| |
| Length = 283
| |
|
| |
| Score = 281 bits (719), Expect = 3e-074
| |
| Identities = 134/282 (47%), Positives = 202/282 (71%), Gaps = 13/282 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++M+LNK D
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENIKHVDFVTILVDARLPLSSQNPMLTKIVGDKPKLMILNKVD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W+ +FE QGIR+L+INS + ++ A+K ++++K +R+R +G++ +
| |
| Sbjct: 63 LADPVRTKEWQSYFEGQGIRTLAINSKEQATVKKVTDAAKSLMKDKIERLRERGIQKETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K K+LE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERY-GLD---EIPEDIAEL 237
| |
| D+ VGL+LA+TGAIKD ++ + +V +FGL + + +YPERL+ER+ G+D E PE I +
| |
| Sbjct: 183 DQEVGLKLALTGAIKDQLLPMDEVTIFGLDYFKANYPERLQERFKGMDLEQETPELIMDW 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +G + +YD+ + ++D+R + G + ++
| |
| Sbjct: 243 TKKLGFRD---------DYDRFYNLFVKDVRDGRLGTYTLDR 275
| |
|
| |
|
| |
| >ref|ZP_01361771.1| GTP-binding [Clostridium sp. OhILAs]
| |
| gb|EAT30686.1| GTP-binding [Clostridium sp. OhILAs]
| |
| Length = 280
| |
|
| |
| Score = 279 bits (714), Expect = 1e-073
| |
| Identities = 129/280 (46%), Positives = 194/280 (69%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I W+PGHM K + + E+LKL+DIVYEL+DARIP+SSRNP ++ I+ +KP++++LNK
| |
| Sbjct: 1 MNINWYPGHMKKTKELIREQLKLVDIVYELLDARIPISSRNPDVDQIIGDKPKVIILNKI 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD T +W E+F+ I + IN++ G+G+ Q+ S+ +++K D + KG +PR
| |
| Sbjct: 61 DLADPRATAKWVEYFKRNSITVIPINTITGEGIRQLAEESERAIKDKMDALIKKGRRPRP 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| R +I+GIPNVGKS+LIN+LA + +TGDRPG+T S+QW+++ +ELLDTPGILWPKF
| |
| Sbjct: 121 ARIMIVGIPNVGKSSLINKLAGRKSTQTGDRPGVTKSKQWIRLKGNMELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| EDE V L LA +GAIKD I++ + +A L L ++ E++ ERY L + I E+ D
| |
| Sbjct: 181 EDEEVALNLAFSGAIKDEIMDTETLAYKLLEILWGNHKEKIVERYKLQDEYTTIIEIMDN 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I RGC++ G I+Y + + +I+ + R+ + G++S E P
| |
| Sbjct: 241 IARNRGCILKGDEIDYSRISNIILDEFRSGRIGQISLEYP 280
| |
|
| |
|
| |
| >ref|NP_721388.1| putative GTP-binding protein [Streptococcus mutans UA159]
| |
| gb|AAN58694.1|AE014939_1 putative GTP-binding protein [Streptococcus mutans UA159]
| |
| Length = 283
| |
|
| |
| Score = 279 bits (714), Expect = 1e-073
| |
| Identities = 130/271 (47%), Positives = 195/271 (71%), Gaps = 5/271 (1%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM+KARR+V E LK +D V LVDAR+P+SS+NPM+ I+ +KP++++LNK D
| |
| Sbjct: 4 IQWFPGHMSKARRQVQENLKFVDFVTILVDARLPLSSQNPMLTKIIGDKPKLIILNKVDL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD+ T +W FE QGI++L++NS + ++ A+K ++ +K ++R +G++ +R
| |
| Sbjct: 64 ADSTCTAEWCNFFEKQGIKALAVNSKEQSAVKKVTEAAKGLMTDKLVKLRERGIQKENLR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +I+GIPNVGKSTL+NRLA K IA G++PG+T QQW+K K LE+LDTPGILWPKFE+
| |
| Sbjct: 124 TMIVGIPNVGKSTLMNRLAGKKIAIVGNKPGVTKGQQWLKSNKNLEILDTPGILWPKFEE 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| E VGL+LA+TGAIKD+++ + ++ +FGL F + +YPERL ERY ++ E+ E+ ++
| |
| Sbjct: 184 EAVGLKLAMTGAIKDNLLPMDEITIFGLDFFKRYYPERLLERYKGIDLEEEAPEIIMSMT 243
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFG 273
| |
| +K G +YD+ +V I+D+R + G
| |
| Sbjct: 244 QKLGF-----RDDYDRFYQVFIKDVRDGRLG 269
| |
|
| |
|
| |
| >ref|ZP_00800925.1| GTP-binding [Alkaliphilus metalliredigenes QYMF]
| |
| gb|EAO81066.1| GTP-binding [Alkaliphilus metalliredigenes QYMF]
| |
| Length = 285
| |
|
| |
| Score = 279 bits (713), Expect = 1e-073
| |
| Identities = 133/280 (47%), Positives = 196/280 (70%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| + I W+PGHM K + + ++LKL+D+VYEL+DARIP+SSRNP I +I+ NKPR+++LNK
| |
| Sbjct: 3 LKINWYPGHMKKTKELLKDQLKLVDVVYELLDARIPISSRNPSINEIIGNKPRVIILNKF 62
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD VT +W ++F+ QGI ++ +N +N +GL + + +++ QEK D M KG K R
| |
| Sbjct: 63 DLADQEVTNRWVKYFKAQGIEAIPVNCLNSKGLKEAIEEGQKMFQEKKDLMIKKGRKERP 122
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +++GIPNVGKS++IN+LA + A+TGD+PG+T ++QW+++ +ELLDTPGILWPKF
| |
| Sbjct: 123 IRIMMVGIPNVGKSSIINQLAGRKSARTGDKPGVTKAKQWIRLKGNMELLDTPGILWPKF 182
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+ V L+LA TGAIKD I++++D+A + L L RY LD P E+ DA
| |
| Sbjct: 183 EDQNVALKLAFTGAIKDEIMDVEDLAFRLVEKLMLENMTNLMNRYKLDSEPAGALEMMDA 242
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG KRG ++ G I+Y + + +I+ + R GR+S E P
| |
| Sbjct: 243 IGIKRGAILPGREIDYLRVSNIILDEFRAGIIGRISMEVP 282
| |
|
| |
|
| |
| >ref|YP_001035144.1| GTP-binding protein, putative [Streptococcus sanguinis SK36]
| |
| gb|ABN44594.1| GTP-binding protein, putative [Streptococcus sanguinis SK36]
| |
| Length = 283
| |
|
| |
| Score = 273 bits (699), Expect = 6e-072
| |
| Identities = 127/273 (46%), Positives = 194/273 (71%), Gaps = 5/273 (1%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E +K +D V LVDAR+P+SS+NPM+ I+ +KP++++LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENIKFVDFVTILVDARLPLSSQNPMLTKIVGDKPKLLILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD ++W+ +FE+Q I +LSINS + ++ A+K+++ +K R + +G++ +
| |
| Sbjct: 63 LADPVRIKEWQSYFESQEIPTLSINSKEQSAVKKVTDAAKKLMADKLARQKERGIRIETL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K IA G++PG+T QQW+K K+LE+LDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKIAVVGNKPGVTKGQQWLKSNKDLEILDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| DE V L+LA+TGAIKD+++ + +V +FGL + ++HYPE L R+ ++ ++ ++ +
| |
| Sbjct: 183 DETVALKLALTGAIKDNLLPMDEVTIFGLNYFKKHYPEELIARFKQLDLSQEAPDMIMDM 242
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGR 274
| |
| +K G +YD+ + ++D+R K GR
| |
| Sbjct: 243 TQKLGF-----RDDYDRFYSLFVKDVRDGKLGR 270
| |
|
| |
|
| |
| >dbj|GAA00255.1| unnamed protein product [Pelotomaculum thermopropionicum SI]
| |
| Length = 306
| |
|
| |
| Score = 271 bits (693), Expect = 3e-071
| |
| Identities = 125/280 (44%), Positives = 195/280 (69%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I W+PGHMAKARR+V E L+L D+V E++DARIP SSRNP I I +KPR+++LNK+
| |
| Sbjct: 23 MDIHWYPGHMAKARRQVKEDLRLADVVIEVLDARIPASSRNPDIGKIAGSKPRLIVLNKS 82
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD +T +W ++F+ G + ++SV+G+G+ +I +++ K + G +PRA
| |
| Sbjct: 83 DLADPVLTGRWMDYFKKAGYEAADVDSVSGRGVREIPGLVEQLAAPKIASLANAGRRPRA 142
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| R +++GIPNVGKS LIN+L + + KTG PG+T +QWV++ LEL+DTPGIL P+
| |
| Sbjct: 143 ARCMVLGIPNVGKSFLINKLVGRRVVKTGSSPGVTRGKQWVRLTGNLELMDTPGILRPRL 202
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| +D + LAVTGA+K+ + NL+ VA L++L E+YP+ ++ERY L+++PE+ E+ +A
| |
| Sbjct: 203 DDPVTAFHLAVTGAVKEEVFNLEKVAGRLLKWLMENYPDAIRERYRLEDLPEEPEEMLNA 262
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG +RG MSGG ++ +++ ++++ R K GR + E+P
| |
| Sbjct: 263 IGARRGYFMSGGAVDLIRSSRAVLKEFREGKMGRFTLEKP 302
| |
|
| |
|
| |
| >ref|YP_809353.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11]
| |
| gb|ABJ72931.1| Predicted GTPase [Lactococcus lactis subsp. cremoris SK11]
| |
| Length = 283
| |
|
| |
| Score = 270 bits (691), Expect = 5e-071
| |
| Identities = 135/284 (47%), Positives = 190/284 (66%), Gaps = 15/284 (5%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHM+KARR+V E LK +D V ELVDAR+PMSSRNPM+ I+ +KPRI+ LNKAD
| |
| Sbjct: 3 TIQWFPGHMSKARRQVQENLKYVDFVIELVDARLPMSSRNPMLGQIIGDKPRIVALNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD++ +W E+F+ QG +L+INS ++ A+K+++ +K + +G+ +
| |
| Sbjct: 63 LADSSKVAEWIEYFDGQGFVTLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHTTL 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +IIGIPN GKSTL+NRLA K +A TG+RPG+T QQW++ KELELLDTPGILWPKFE
| |
| Sbjct: 123 RTMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPKFE 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD------EIPEDIA 235
| |
| D+LVGL+LA+TGAIKD ++ + +V +FGL ++Y +RY + EIP+ I
| |
| Sbjct: 183 DQLVGLKLALTGAIKDDLLPMDEVTIFGLNHFLKNYRSMTMKRYRMTEEDLELEIPDLIM 242
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| EL G + +YD+ + ++D+R K G ++
| |
| Sbjct: 243 ELTARFGFRD---------DYDRFYNMFVKDVRDGKLGLFCLDE 277
| |
|
| |
|
| |
| >ref|YP_001032488.1| hypothetical protein llmg_1175 [Lactococcus lactis subsp. cremoris
| |
| MG1363]
| |
| emb|CAL97768.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
| |
| MG1363]
| |
| Length = 282
| |
|
| |
| Score = 269 bits (687), Expect = 1e-070
| |
| Identities = 135/285 (47%), Positives = 190/285 (66%), Gaps = 15/285 (5%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM+KARR+V E LK +D V ELVDAR+PMSSRNPM+ I+ +KPRI+ LNKA
| |
| Sbjct: 1 MVIQWFPGHMSKARRQVQENLKYVDFVIELVDARLPMSSRNPMLGQIIGDKPRIIALNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD++ +W E+F+ QG +L+INS ++ A+K+++ +K + +G+
| |
| Sbjct: 61 DLADSSKVAEWIEYFDEQGFVTLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHTT 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +R +IIGIPN GKSTL+NRLA K +A TG+RPG+T QQW++ KELELLDTPGILWPKF
| |
| Sbjct: 121 LRTMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD------EIPEDI 234
| |
| ED+LVGL+LA+TGAIKD ++ + +V +FGL ++Y +RY + EIP+ I
| |
| Sbjct: 181 EDQLVGLKLALTGAIKDDLLPMDEVTIFGLDHFLKNYRSVTMKRYRMTEEDLELEIPDLI 240
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| EL G + +YD+ + ++D+R K G ++
| |
| Sbjct: 241 MELTARFGFRD---------DYDRFYNMFVKDVRDGKLGLFCLDE 276
| |
|
| |
|
| |
| >ref|NP_267450.1| GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
| |
| gb|AAK05392.1|AE006361_8 GTP-binding protein [Lactococcus lactis subsp. lactis Il1403]
| |
| Length = 282
| |
|
| |
| Score = 269 bits (687), Expect = 1e-070
| |
| Identities = 135/285 (47%), Positives = 189/285 (66%), Gaps = 15/285 (5%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM+KARR+V E LK +D V ELVDAR+P+SSRNPM+ I+ +KPRI+ LNKA
| |
| Sbjct: 1 MVIQWFPGHMSKARRQVQENLKYVDFVIELVDARLPISSRNPMLGQIIGDKPRIIALNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD+ QW E F+ QG +L+INS ++ A+K+++ +K + +G+
| |
| Sbjct: 61 DLADSNAVAQWIEFFDEQGFVTLAINSKEEYTAKRLTVAAKKLMADKVAHDKERGIAHTT 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +R +IIGIPN GKSTL+NRLA K +A TG+RPG+T QQW++ KELELLDTPGILWPKF
| |
| Sbjct: 121 LRTMIIGIPNAGKSTLMNRLAGKKVAVTGNRPGVTKGQQWIRTNKELELLDTPGILWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD------EIPEDI 234
| |
| ED+LVGL+LA+TGAIKD ++ + +V +FGL + ++Y +RY + EIP+ I
| |
| Sbjct: 181 EDQLVGLKLALTGAIKDDLLPMDEVTIFGLNYFLKNYRTVTMKRYRMTEEDLELEIPDLI 240
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| EL G + +YD+ + ++D+R K G ++
| |
| Sbjct: 241 MELTARFGFRD---------DYDRFYNMFVKDVRDGKLGLFCLDE 276
| |
|
| |
|
| |
| >ref|YP_395605.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
| |
| emb|CAI55296.1| Putative GTP-binding protein [Lactobacillus sakei subsp. sakei 23K]
| |
| Length = 282
| |
|
| |
| Score = 269 bits (687), Expect = 1e-070
| |
| Identities = 131/280 (46%), Positives = 196/280 (70%), Gaps = 7/280 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQW+PGHMAKA++++ E+LK +D++ E+VDAR+P SS NPMI+++ +NKP ++++NKA
| |
| Sbjct: 1 MTIQWYPGHMAKAQKQIKERLKAVDLILEIVDARVPESSINPMIQELGQNKPILLIMNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD TQQW E F+ +GI ++++++ + L I ++EIL EK + RAKG++
| |
| Sbjct: 61 DMADPRRTQQWIETFKKRGITAIALDAQHKAKLPMIEKVAQEILAEKLAKKRAKGIRNPV 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+ +G+PNVGKST++NRL +KNIA TG+RPG+T +QQW+K G+ LELLDTPG+LWPKF
| |
| Sbjct: 121 IRAMCVGVPNVGKSTILNRLVQKNIAVTGNRPGVTKNQQWLKAGQTLELLDTPGVLWPKF 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD--EIPEDIAELF 238
| |
| ED +G +LA+TGAI D+I + DV +F L +E+Y +L++ Y + E+ E AEL
| |
| Sbjct: 181 EDPTIGSKLALTGAISDAIYHPDDVVIFALEHFKEYYSSQLQKVYKVTDAELEEPAAELI 240
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| + ++ G +YD+ I D R K GR + +
| |
| Sbjct: 241 MILTKRLGFKE-----DYDRFCVKFINDARQGKLGRFTLD 275
| |
|
| |
|
| |
| >ref|YP_535610.1| GTP-binding protein [Lactobacillus salivarius subsp. salivarius
| |
| UCC118]
| |
| gb|ABD99527.1| GTP-binding protein [Lactobacillus salivarius subsp. salivarius
| |
| UCC118]
| |
| Length = 285
| |
|
| |
| Score = 265 bits (678), Expect = 2e-069
| |
| Identities = 137/280 (48%), Positives = 192/280 (68%), Gaps = 8/280 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAKA R+V E LK +DIV ELVDAR+P SSRNP + ++L++KP I++L K D
| |
| Sbjct: 4 IQWFPGHMAKALRQVKENLKSVDIVLELVDARLPESSRNPQLAEVLQDKPSIIVLTKMDL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD A T++W ++E+ G ++++NS +G L I KEIL +K + KG++ + +R
| |
| Sbjct: 64 ADPAETKRWINYYESMGQPAIAVNSNSGN-LKIIEKKIKEILADKLQSRKEKGIQNQKLR 122
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+ IGIPNVGKSTL+N L KKN+A+TG+RPG+T +QQW+K GK+L+LLDTPGILWPKFED
| |
| Sbjct: 123 AMCIGIPNVGKSTLLNHLVKKNVAQTGNRPGVTKAQQWLKAGKDLQLLDTPGILWPKFED 182
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL--DEIPEDIAELFDA 240
| |
| LVG +LA+TGAIKD++ DVA++ + P+ L +RY L E+ + E A
| |
| Sbjct: 183 PLVGKKLALTGAIKDTLYAKDDVALYAVEHFIHTNPDALAQRYRLTQSELEDTTVETLLA 242
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I G +YD+ +E +I +IR K GR + ++P
| |
| Sbjct: 243 ITRNMGFKE-----DYDRASERLIFEIRKGKLGRYTLDKP 277
| |
|
| |
|
| |
| >ref|YP_806617.1| Predicted GTPase [Lactobacillus casei ATCC 334]
| |
| gb|ABJ70175.1| Predicted GTPase [Lactobacillus casei ATCC 334]
| |
| Length = 286
| |
|
| |
| Score = 265 bits (677), Expect = 2e-069
| |
| Identities = 127/280 (45%), Positives = 194/280 (69%), Gaps = 7/280 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAKAR++V EK+K +D+V E+VDAR P SSRNPM+++++ +KPRIM+LNK D
| |
| Sbjct: 4 IQWFPGHMAKARKQVQEKIKQVDLVLEVVDARTPESSRNPMLDELVADKPRIMVLNKQDL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD A+T W +++++QG +++I++ + + L QI + +++ EK R +A+G++ I+
| |
| Sbjct: 64 ADPALTAAWVQYYQDQGFAAIAIDAQHAKRLQQIPQLATKLMAEKIARKKARGIRNPMIK 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+ IGIPNVGKST++NRL ++NIA TG++PG+T +QQW+K +LLDTPGILWPKF
| |
| Sbjct: 124 AMCIGIPNVGKSTVLNRLVRRNIAVTGNKPGVTKNQQWLKASDNFQLLDTPGILWPKFAS 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL--DEIPEDIAELFDA 240
| |
| + +G+RLA TGAI D++ V ++GL + HYP LK+ Y + D++ E +L
| |
| Sbjct: 184 QAIGMRLAFTGAIADAVFQEDMVGLYGLTYFMAHYPAALKKAYHVTDDDLNEAPHDLLVK 243
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + + +G + YD+ E +I D R K GR + E+P
| |
| Sbjct: 244 LTKSQGFAEA-----YDRMAERLIFDARQGKLGRFTLEKP 278
| |
|
| |
|
| |
| >ref|YP_804470.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745]
| |
| gb|ABJ68028.1| Predicted GTPase [Pediococcus pentosaceus ATCC 25745]
| |
| Length = 287
| |
|
| |
| Score = 265 bits (677), Expect = 2e-069
| |
| Identities = 135/278 (48%), Positives = 190/278 (68%), Gaps = 7/278 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGHMAKA R+V EKLKL+DIV+ELVDARIP+SSRNPMIED++K+KP +++L KAD
| |
| Sbjct: 4 IQWYPGHMAKAIRQVEEKLKLVDIVFELVDARIPVSSRNPMIEDVIKSKPHLLILTKADL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD T++W ++++++ ++++NS N I+ ++EIL +K +G+K IR
| |
| Sbjct: 64 ADPKETKKWLDYYKSRNEYAIALNSKEPSTENIILKKTQEILADKLANKADRGIKNAEIR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| ++ IGIPNVGKSTL+N L K +A TGDRPG+T QQW++ + L LLDTPGILWPKFED
| |
| Sbjct: 124 SMCIGIPNVGKSTLLNHLVNKKVAITGDRPGVTKKQQWLRSRRGLYLLDTPGILWPKFED 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL--DEIPEDIAELFDA 240
| |
| + VG +LA TGAIKD++ DV ++GL HY E L RY L D++ ++ EL
| |
| Sbjct: 184 QNVGNKLAFTGAIKDNLFANDDVVIYGLNIFINHYREGLMGRYHLTEDDLEMELPELLLL 243
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| I +K G +YD+ ++ I+ D R K GR + +
| |
| Sbjct: 244 ITQKLGM-----RDDYDRASQRILLDARKGKLGRFTLD 276
| |
|
| |
|
| |
| >ref|YP_206469.1| GTP-binding protein [Vibrio fischeri ES114]
| |
| gb|AAW87581.1| GTP-binding protein [Vibrio fischeri ES114]
| |
| Length = 314
| |
|
| |
| Score = 258 bits (660), Expect = 2e-067
| |
| Identities = 127/281 (45%), Positives = 191/281 (67%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM KAR+E+ E + ID++ E++DARIP SS NP+I I K+KP + +LNK D
| |
| Sbjct: 6 IQWFPGHMHKARKEIEEVVPKIDVIIEVLDARIPFSSENPLISSIRKDKPCVKVLNKRDL 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| +D VTQ W EH E QG+ ++++ + N + +++I+ ++++ + A G + +
| |
| Sbjct: 66 SDPEVTQLWIEHLEKEQGVTAMAVTTENPEEIHKIMEVCRKLVPHR----EAMG---KNV 118
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +I+GIPNVGKST+IN LA + IA TG++P +T QQ + + + L DTPGILWPK E
| |
| Sbjct: 119 RTMIMGIPNVGKSTIINTLAGRTIAVTGNQPAVTRRQQRINLQNGVVLSDTPGILWPKVE 178
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| + G RLA TGA+KD+ + +VA + + +L + YPERLKERY LDE+P++ EL +AI
| |
| Sbjct: 179 NPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKQYPERLKERYKLDELPDNDLELMEAI 238
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| G RGCL +GG IN K +E+++ ++R+ G+++ E P M
| |
| Sbjct: 239 GRSRGCLQAGGRINLYKASEILLHELRSGVLGQVTLELPEM 279
| |
|
| |
|
| |
| >ref|YP_518823.1| hypothetical protein DSY2590 [Desulfitobacterium hafniense Y51]
| |
| dbj|BAE84379.1| hypothetical protein [Desulfitobacterium hafniense Y51]
| |
| Length = 276
| |
|
| |
| Score = 257 bits (657), Expect = 4e-067
| |
| Identities = 123/279 (44%), Positives = 191/279 (68%), Gaps = 8/279 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHMAKA+R + E+L+ +D+V EL DAR+P SSRNP+++++L +KP+I++LNK
| |
| Sbjct: 1 MNIQWFPGHMAKAKRLLLEQLRWVDVVIELGDARLPESSRNPLLQEMLGDKPKIIILNKV 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD T+ W Q L++++ NG G+ +IVP + ++ K ++ AKG++ R+
| |
| Sbjct: 61 DLADPYWTEIWTRKLR-QANPVLAVSATNGAGVGKIVPEVERLMAHKIEKWTAKGIRARS 119
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPN GKS+L+N L AKTG++PG+T QW+++ + +ELLDTPG+LWPKF
| |
| Sbjct: 120 IRVMIVGIPNCGKSSLVNNLIGSAKAKTGNKPGVTRGNQWIRIHERVELLDTPGLLWPKF 179
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAEL-FD 239
| |
| ED VG +L GAI+D ++NL++++++ L L+E+YPE L RY ED+ L +
| |
| Sbjct: 180 EDPEVGKKLGAVGAIRDEVLNLEELSLWVLEQLKENYPEAL-TRY-----TEDVQNLDLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| IG KRGCL+ GG ++ K ++ +R+ R G+ + +
| |
| Sbjct: 234 GIGRKRGCLVKGGQVDILKAAQIFLREFRAGSLGKFTLD 272
| |
|
| |
|
| |
| >ref|YP_001087752.1| putative GTPase [Clostridium difficile 630]
| |
| emb|CAJ68114.1| putative GTPase [Clostridium difficile 630]
| |
| Length = 289
| |
|
| |
| Score = 257 bits (656), Expect = 6e-067
| |
| Identities = 123/278 (44%), Positives = 185/278 (66%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I W+PGHM K + V LKLID+V EL+DARIP SS+NP I+ ++ +KPR+++LNK+D
| |
| Sbjct: 7 INWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRVVVLNKSDM 66
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD QW E+++ I+++ ++++ G G+N+I+ K + +EK ++ KG K RAIR
| |
| Sbjct: 67 ADRDKLNQWIEYYKKINIKAIPVDTIKGVGINKIIEECKNVTREKMSSLKDKGRKERAIR 126
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +I+G+PNVGKS+LIN+L + +TGD+PG+T +QWV++ LELLDTPGILWPKFED
| |
| Sbjct: 127 IMIVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFED 186
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + V L LA + AIKD I++ + +A+ + L + PE+LK RY LD + E E D IG
| |
| Sbjct: 187 QEVALNLAFSRAIKDEILDTETLALRLIEKLMKIEPEKLKARYKLDCLGETPIETMDMIG 246
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| KRG + ++Y + ++ + R K G ++ E P
| |
| Sbjct: 247 HKRGFITGKKELDYTRIATTVLNEFRDGKIGNITLEVP 284
| |
|
| |
|
| |
| >ref|ZP_01635436.1| hypothetical protein CdifQ_03001396 [Clostridium difficile
| |
| QCD-32g58]
| |
| Length = 301
| |
|
| |
| Score = 256 bits (655), Expect = 7e-067
| |
| Identities = 123/278 (44%), Positives = 184/278 (66%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I W+PGHM K + V LKLID+V EL+DARIP SS+NP I+ ++ +KPR+++LNK+D
| |
| Sbjct: 19 INWYPGHMKKTKELVKNNLKLIDVVIELLDARIPFSSKNPDIDRLVGDKPRVVVLNKSDM 78
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD QW E+++ I+++ ++++ G G+N I+ K + +EK ++ KG K RAIR
| |
| Sbjct: 79 ADRDKLNQWIEYYKKINIKAIPVDTIKGVGINNIIEECKNVTREKMSSLKDKGRKERAIR 138
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +I+G+PNVGKS+LIN+L + +TGD+PG+T +QWV++ LELLDTPGILWPKFED
| |
| Sbjct: 139 IMIVGVPNVGKSSLINKLTGRKSTQTGDKPGVTKGKQWVRLKGNLELLDTPGILWPKFED 198
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + V L LA + AIKD I++ + +A+ + L + PE+LK RY LD + E E D IG
| |
| Sbjct: 199 QEVALNLAFSRAIKDEILDTETLALRLIEKLMKIEPEKLKARYKLDCLGETPIETMDMIG 258
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| KRG + ++Y + ++ + R K G ++ E P
| |
| Sbjct: 259 HKRGFITGKKELDYTRIAATVLNEFRDGKIGNITLEVP 296
| |
|
| |
|
| |
| >ref|ZP_01369602.1| GTP-binding [Desulfitobacterium hafniense DCB-2]
| |
| gb|EAT53184.1| GTP-binding [Desulfitobacterium hafniense DCB-2]
| |
| Length = 276
| |
|
| |
| Score = 256 bits (653), Expect = 1e-066
| |
| Identities = 122/279 (43%), Positives = 192/279 (68%), Gaps = 8/279 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+IQWFPGHMAKA+R + E+L+ +D+V EL DAR+P SSRNP+++++L +KP+I++LNK
| |
| Sbjct: 1 MSIQWFPGHMAKAKRLLLEQLRWVDVVIELGDARLPESSRNPLLQEMLGDKPKIIILNKV 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD T+ W Q L++++ +G G+ +IVP + ++ K ++ AKG++ R+
| |
| Sbjct: 61 DLADPYWTEIWTRKLR-QSNPVLAVSATSGAGVGKIVPEVERLMAHKIEKWTAKGIRARS 119
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPN GKS+L+N L AKTG++PG+T QW+++ + +ELLDTPG+LWPKF
| |
| Sbjct: 120 IRVMIVGIPNCGKSSLVNNLIGSAKAKTGNKPGVTRGNQWIRIHERVELLDTPGLLWPKF 179
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAEL-FD 239
| |
| ED VG +L GAI+D ++NL++++++ L L+E+YPE L RY ED+ L +
| |
| Sbjct: 180 EDPEVGKKLGAVGAIRDEVLNLEELSLWVLEQLKENYPEAL-TRY-----TEDVQNLDLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| IG KRGCL+ GG ++ K ++ +R+ R G+ + +
| |
| Sbjct: 234 GIGRKRGCLVKGGQVDILKAAQIFLREFRAGSLGKFTLD 272
| |
|
| |
|
| |
| >ref|ZP_01217168.1| GTP-binding protein [Psychromonas sp. CNPT3]
| |
| gb|EAS38006.1| GTP-binding protein [Psychromonas sp. CNPT3]
| |
| Length = 311
| |
|
| |
| Score = 255 bits (652), Expect = 2e-066
| |
| Identities = 131/281 (46%), Positives = 187/281 (66%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM KA +++ E L +DI+ E+VDARIP SS NP+I I +N P I +LNKAD
| |
| Sbjct: 6 IQWFPGHMHKAHKQIKEVLPQVDIIIEVVDARIPYSSENPLIASIRENTPCIKVLNKADL 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD A+T +W + E QGI++LSI+++ + ++QI +++L K + + I
| |
| Sbjct: 66 ADPAITAEWISYLEEEQGIKALSISTLKPEQVHQITKLCQKMLPNKV-------TQGKQI 118
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RA+I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ +++ + L DTPG LWPK E
| |
| Sbjct: 119 RAMIMGIPNVGKSTIINILADRIIAKTGNEPAVTKNQQRIRLPSGIMLSDTPGFLWPKIE 178
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| + G RLA+TGAIKD+ I +D+A + +L ++YPERLK RY L E+PE EL +AI
| |
| Sbjct: 179 NADSGYRLAITGAIKDTAIEYEDIAYYAAEYLIKNYPERLKARYELAEVPETDHELMEAI 238
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| +RGCL +GG + K + +++ ++R G LS E P M
| |
| Sbjct: 239 AVRRGCLRAGGHFDIYKVSTILLNELRAGALGPLSIETPAM 279
| |
|
| |
|
| |
| >ref|YP_927868.1| GTP-binding protein [Shewanella amazonensis SB2B]
| |
| gb|ABM00199.1| GTP-binding protein [Shewanella amazonensis SB2B]
| |
| Length = 314
| |
|
| |
| Score = 254 bits (650), Expect = 3e-066
| |
| Identities = 129/283 (45%), Positives = 182/283 (64%), Gaps = 7/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KA++E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK
| |
| Sbjct: 1 MAIQWYPGHMHKAQKEIAEAMPQVDLVIEVLDARIPYSSENPMVAKLRGDKPCIKLLNKC 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A+T+ W H E QG++++++ ++ L ++P L + DR +
| |
| Sbjct: 61 DLADPAITEAWIAHLEKEQGVKAMAVTTLQPGHLKTVIPELVRKLVPERDRA------DK 114
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 115 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKAQQRINLKNGIVLSDTPGILWPK 174
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F F + YP LKERY LDE+ +D L +
| |
| Sbjct: 175 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAAFFRDAYPAELKERYKLDELSDDDVALLE 234
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L SGG ++ K E+++ + R+ K G LS E P M
| |
| Sbjct: 235 DIGRKRGALRSGGYVDLHKAAELLLHEFRSGKLGLLSLETPEM 277
| |
|
| |
|
| |
| >ref|YP_001093715.1| GTP-binding protein, HSR1-related [Shewanella loihica PV-4]
| |
| gb|ABO23456.1| GTP-binding protein, HSR1-related [Shewanella loihica PV-4]
| |
| Length = 313
| |
|
| |
| Score = 252 bits (644), Expect = 1e-065
| |
| Identities = 126/283 (44%), Positives = 189/283 (66%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + N+P I LLNK+
| |
| Sbjct: 1 MAIQWFPGHMHKARKEIAEVMPQVDLVIEVLDARIPYSSENPMVTSLRGNRPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +TQ+W ++ E QG+++++I ++ + ++ ++++ + D++ +
| |
| Sbjct: 61 DLADPEITQRWIDYLEQEQGVKAMAITTLQAAQVRKVPELCRKLVPSR-DKIE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKTQQRINLKNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E G RLAVTGAIKD+ + +DVA+F + + YP+ + ERY L E+P D L +
| |
| Sbjct: 174 VDNEASGYRLAVTGAIKDTAMEYEDVAMFAAEYFLKAYPDAMLERYKLKELPNDDIGLLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AIG KRG L GG I+ K +E+++ + R+ K G+LS E P M
| |
| Sbjct: 234 AIGRKRGALRPGGRIDLHKASELLLHEFRSGKIGQLSLETPEM 276
| |
|
| |
|
| |
| >ref|YP_818246.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
| |
| ATCC 8293]
| |
| gb|ABJ61873.1| Predicted GTPase [Leuconostoc mesenteroides subsp. mesenteroides
| |
| ATCC 8293]
| |
| Length = 284
| |
|
| |
| Score = 252 bits (644), Expect = 1e-065
| |
| Identities = 128/281 (45%), Positives = 186/281 (66%), Gaps = 13/281 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAKA R + E LKL+D+V+ELVD+RIP SSRNP ++ ++ NKPR++++ KAD
| |
| Sbjct: 5 IQWFPGHMAKAFRLMRENLKLVDVVFELVDSRIPESSRNPEVDKLIGNKPRLLIMTKADL 64
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD T+ WK+HFE QG L +++ + + + A++ ++ K AKG++ + IR
| |
| Sbjct: 65 ADPDQTRAWKKHFEAQGYTVLVLDTRDPRTPQLVTKAARRAVEAKKAAQLAKGIQDQPIR 124
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+I G+PNVGKSTL+N L KN+A T DRPG+T W+K +LELLD+PG+LWPKFED
| |
| Sbjct: 125 AMISGVPNVGKSTLLNHLVMKNVAPTADRPGVTKKIAWLKTPTKLELLDSPGVLWPKFED 184
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + +G++LA+TGA+KD+I D A+F + F E+ PE + ERY L++ +FD
| |
| Sbjct: 185 QNIGMKLALTGAVKDTIFAKDDAALFLINFFREYRPEAIIERYHLND------NIFDQ-- 236
| |
|
| |
| Query: 243 EKRGCLMS-----GGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| E L+S G +YDK +E I+ D+R K G + +
| |
| Sbjct: 237 ENVDVLLSITSKLGFKDDYDKASERILNDLRKNKLGAFTLD 277
| |
|
| |
|
| |
| >ref|NP_785403.1| GTPase [Lactobacillus plantarum WCFS1]
| |
| emb|CAD64252.1| GTPase [Lactobacillus plantarum WCFS1]
| |
| Length = 284
| |
|
| |
| Score = 251 bits (641), Expect = 3e-065
| |
| Identities = 125/278 (44%), Positives = 188/278 (67%), Gaps = 7/278 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGHMAKA ++ + L L+DIV+ELVDARIP++SRNP IE ++ KP ++++ K D
| |
| Sbjct: 4 IQWYPGHMAKAIHQIQDNLHLVDIVFELVDARIPVASRNPEIEKTVQQKPHLLIMTKKDL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD T W +++E+QG +++++S + Q+ A+ ++L +K ++ A+G+ R IR
| |
| Sbjct: 64 ADPQATADWVKYYEDQGQVAIAVDSRSRTIGKQMTQAASDMLADKLAKIAARGITNRPIR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+ +GIPNVGKSTL+N + K IAK GDRPG+T QQW+K +LELLDTPGILWPKFED
| |
| Sbjct: 124 AVCVGIPNVGKSTLLNHIVNKKIAKVGDRPGVTKGQQWLKASNKLELLDTPGILWPKFED 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL--DEIPEDIAELFDA 240
| |
| ++VG +LAVTGAIK++I DVA+F L F ++HY RL +RY L +++ EL A
| |
| Sbjct: 184 QVVGTKLAVTGAIKENIYPNDDVALFALDFFKQHYAARLVDRYHLTAEQLTLPNPELLIA 243
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| + + +G ++++ + DIR + GR + +
| |
| Sbjct: 244 MTKN-----AGMRDDWERFCVAFLLDIRKGRLGRFTLD 276
| |
|
| |
|
| |
| >ref|ZP_01305969.1| putative GTPase YlqF [Oceanobacter sp. RED65]
| |
| gb|EAT13159.1| putative GTPase YlqF [Oceanobacter sp. RED65]
| |
| Length = 302
| |
|
| |
| Score = 250 bits (639), Expect = 5e-065
| |
| Identities = 123/281 (43%), Positives = 187/281 (66%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM +AR+++ E + ID+V E++DAR+P SS NP+I D+LK++P + LLNK
| |
| Sbjct: 1 MAIQWFPGHMHRARKQILETIANIDLVIEVLDARLPYSSENPIIPDLLKDRPCLKLLNKT 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +TQ W ++F + + R++++ ++ + + +I E+L E+ + +
| |
| Sbjct: 61 DLADPELTQVWLDYFNSRENTRAIALTGLDKKQVKRITQYCHEMLPERRE-------SKK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +IR +I+GIPNVGKSTLIN LA + +AK G+ P +T Q +K+ + L DTPGILWPK
| |
| Sbjct: 114 SIRTMIVGIPNVGKSTLINTLAGRTVAKAGNLPALTRHPQQIKINDGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| + G RLA +GA++D+ ++ +VA F + L + YPERL ERY L +PE E+ D
| |
| Sbjct: 174 IHNVKSGFRLAASGAVRDTALDYFEVAEFAGQMLIDLYPERLVERYKLKALPESGEEVID 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| AIG KRGCL SGG+++ K E++I ++R K G+L++E P
| |
| Sbjct: 234 AIGRKRGCLRSGGVVDMHKAAEILIHELRNGKMGKLTYETP 274
| |
|
| |
|
| |
| >ref|ZP_01274828.1| GTP-binding protein [Lactobacillus reuteri 100-23]
| |
| gb|EAS88192.1| GTP-binding protein [Lactobacillus reuteri 100-23]
| |
| Length = 290
| |
|
| |
| Score = 250 bits (639), Expect = 5e-065
| |
| Identities = 129/283 (45%), Positives = 183/283 (64%), Gaps = 9/283 (3%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHMAKA R++ E++ L+DI++ELVDAR+P SS+NP + KP+++++ K D
| |
| Sbjct: 3 TIQWFPGHMAKALRQIREQMPLVDILFELVDARVPYSSQNPEVALAAGEKPKLLIMTKTD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD +W ++FE L+++S + SKEIL++K +AKG+K R I
| |
| Sbjct: 63 LADQKRLNEWIKYFEQHNQPVLALDSRQNNVAKVVTAKSKEILKDKLAEEKAKGMKKRPI 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RA+ +G+PNVGKSTL+N L KKN+A TG+RPG+TT QQW++ +LELLDTPG+LW KF
| |
| Sbjct: 123 RAMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSAKLELLDTPGVLWHKFA 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIA----EL 237
| |
| G+ LA+TGAIKDS+ DVA+F L +L +H PE LK+RY L + D + +L
| |
| Sbjct: 183 TPKQGIMLALTGAIKDSLYAKDDVALFALDYLRQHQPEVLKQRYHLTDADLDESVTNPDL 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I K G +YD+ +E +I D+R K G ++ E P
| |
| Sbjct: 243 LLTITAKMGF-----RDDYDRASERLIFDLRKGKLGPITLEIP 280
| |
|
| |
|
| |
| >ref|ZP_01616538.1| GTP-binding protein [marine gamma proteobacterium HTCC2143]
| |
| gb|EAW32047.1| GTP-binding protein [marine gamma proteobacterium HTCC2143]
| |
| Length = 307
| |
|
| |
| Score = 250 bits (638), Expect = 7e-065
| |
| Identities = 124/281 (44%), Positives = 186/281 (66%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+IQWFPGHM KAR+++ E L I ++ E++DARIP SS NPMI ++ +KP I +L K+
| |
| Sbjct: 1 MSIQWFPGHMNKARKQIKELLPQIHLIIEVLDARIPFSSENPMIAELRGDKPCIKVLTKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T++W ++ + Q GI+++++ + + Q+VP +++L E+
| |
| Sbjct: 61 DLADPKITERWLQYLDKQKGIKAIAVTTKQPDIIRQLVPLCRKMLPER-------DAGHN 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| I +I+GIPNVGKSTLIN LA K IAKTG+ P +T QQ + + + L DTPG+LWPK
| |
| Sbjct: 114 DIHVMIMGIPNVGKSTLINTLAGKTIAKTGNEPAVTKGQQRINLRNGIMLFDTPGMLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E E RLA TGAIKD+ ++ +DVA F FL +YPERL+ERY + +IP++ +L +
| |
| Sbjct: 174 VESEKSSYRLATTGAIKDTAMSYEDVAFFAADFLLLNYPERLRERYQMIDIPDNELDLLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG KRGCL SGG ++ +K + +++ ++R+ G +S E P
| |
| Sbjct: 234 TIGHKRGCLRSGGKVDLEKVSTILLNELRSGTLGPISLEVP 274
| |
|
| |
|
| |
| >ref|YP_943783.1| GTP-binding protein, HSR1-related [Psychromonas ingrahamii 37]
| |
| gb|ABM04184.1| GTP-binding protein, HSR1-related [Psychromonas ingrahamii 37]
| |
| Length = 312
| |
|
| |
| Score = 250 bits (638), Expect = 7e-065
| |
| Identities = 129/281 (45%), Positives = 184/281 (65%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM KA +++ E L +DI+ E+VDARIP SS NP+I I +N P I +LNK+D
| |
| Sbjct: 6 IQWFPGHMHKAHKQIKEVLPQVDIIIEVVDARIPYSSENPLIAHIRENTPCIKVLNKSDL 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD +T QW + E QGI++L+I + + ++QI +++L K + + I
| |
| Sbjct: 66 ADPEITAQWITYLEQEQGIKALAITTSKPEQVHQITKLCEQMLPHKLGQ-------DKQI 118
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RA+I+GIPNVGKST+IN LA + IAKTG+ P +T QQ +++ + L DTPG LWPK E
| |
| Sbjct: 119 RAMIMGIPNVGKSTIINILADRIIAKTGNEPAVTKQQQRIRLPSGIMLSDTPGFLWPKIE 178
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| + G RLAVTGAIKD+ I +D+A + +L +YPERLK+RY L+ +PE EL +AI
| |
| Sbjct: 179 NANSGYRLAVTGAIKDTAIEYEDIAYYAAEYLLANYPERLKKRYELETLPESDHELMEAI 238
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| +RGCL +GG + K + +++ ++R+ G LS E P M
| |
| Sbjct: 239 ALRRGCLRAGGHFDIYKVSTILLNELRSGALGPLSIETPEM 279
| |
|
| |
|
| |
| >ref|ZP_01164246.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
| |
| gb|EAR58254.1| GTP-binding protein [Lactobacillus reuteri JCM 1112]
| |
| Length = 290
| |
|
| |
| Score = 249 bits (636), Expect = 1e-064
| |
| Identities = 129/283 (45%), Positives = 182/283 (64%), Gaps = 9/283 (3%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHMAKA R++ E++ L+DI++ELVDAR+P SS+NP + KP+++++ K D
| |
| Sbjct: 3 TIQWFPGHMAKALRQIREQMPLVDILFELVDARVPYSSQNPEVALAAGEKPKLLIMTKTD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD +W ++FE L+++S + SKEIL++K +AKG+K R I
| |
| Sbjct: 63 LADQKRLNEWIKYFEQHNQPVLALDSRQNNVAKVVTAKSKEILKDKLAEEKAKGMKKRPI 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RA+ +G+PNVGKSTL+N L KKN+A TG+RPG+TT QQW++ ELELLDTPG+LW KF
| |
| Sbjct: 123 RAMCVGVPNVGKSTLLNHLVKKNVAATGNRPGVTTGQQWLRSSAELELLDTPGVLWHKFA 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIA----EL 237
| |
| G+ LA+TGAIKDS+ DVA+F L +L +H E LK+RY L + D + +L
| |
| Sbjct: 183 TPKQGIMLALTGAIKDSLYAKDDVALFALDYLRQHQSEVLKQRYHLTDADLDESVTNPDL 242
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I K G +YD+ +E +I D+R K G ++ E P
| |
| Sbjct: 243 LLTITAKMGF-----RDDYDRASERLIFDLRKGKLGPITLEVP 280
| |
|
| |
|
| |
| >ref|NP_232919.1| hypothetical protein VCA0528 [Vibrio cholerae O1 biovar eltor str.
| |
| N16961]
| |
| ref|ZP_01676239.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
| |
| ref|ZP_01679497.1| conserved hypothetical protein [Vibrio cholerae V52]
| |
| gb|AAF96431.1| conserved hypothetical protein [Vibrio cholerae O1 biovar eltor
| |
| str. N16961]
| |
| gb|EAX59308.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
| |
| gb|EAX63790.1| conserved hypothetical protein [Vibrio cholerae V52]
| |
| gb|EAY35305.1| conserved hypothetical protein [Vibrio cholerae 1587]
| |
| gb|EAY38760.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
| |
| gb|EAZ47679.1| conserved hypothetical protein [Vibrio cholerae MO10]
| |
| gb|EAZ49323.1| conserved hypothetical protein [Vibrio cholerae V51]
| |
| gb|EAZ72516.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
| |
| Length = 314
| |
|
| |
| Score = 249 bits (635), Expect = 2e-064
| |
| Identities = 120/282 (42%), Positives = 188/282 (66%), Gaps = 8/282 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| +IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NP+I I KP + +LNK D
| |
| Sbjct: 5 SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHIRGEKPCVKVLNKRD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| AD +T+ W H E + G+++++I + N Q +++I+ +++ ++ + +
| |
| Sbjct: 65 LADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEI-------GKN 117
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPNVGKST+IN LA + IA+TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 118 IRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKV 177
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E+ G RLA TGA+KD+ + +VA + + +L +HYPERLKERY +DE+PE EL +
| |
| Sbjct: 178 ENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPETDVELMEE 237
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L +G ++ K +E+++ ++R G+++ E+P M
| |
| Sbjct: 238 IGRKRGALRAGARVDLHKASEILLHELRQGVLGQITLERPEM 279
| |
|
| |
|
| |
| >ref|ZP_01540298.1| GTP-binding [Shewanella woodyi ATCC 51908]
| |
| gb|EAV37127.1| GTP-binding [Shewanella woodyi ATCC 51908]
| |
| Length = 312
| |
|
| |
| Score = 248 bits (634), Expect = 2e-064
| |
| Identities = 125/283 (44%), Positives = 186/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NP++ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEVMPQVDLVIEVLDARIPYSSENPVVSSLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD TQ+W E+ E QG+++++I ++ + +I ++ + + D++ +
| |
| Sbjct: 61 DLADPETTQRWIEYLEREQGVKAMAITTLQAAQVKKIPDLCRKFVPSR-DKIE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRTIAKTGNEPAVTKVQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLA+TGAIKD+ + +DVA+F + + YPE + ERY L E+P+ EL +
| |
| Sbjct: 174 VDNEKSSYRLAITGAIKDTAMEYEDVAMFAAEYFLQAYPEAIAERYKLKELPDTDIELLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AIG KRG L GG I+ K +E+++ + R+ K G+LS E P M
| |
| Sbjct: 234 AIGRKRGALRPGGRIDLHKVSELVLHEFRSGKIGQLSLETPEM 276
| |
|
| |
|
| |
| >ref|NP_762057.1| Predicted GTPase [Vibrio vulnificus CMCP6]
| |
| gb|AAO07047.1|AE016808_67 Predicted GTPase [Vibrio vulnificus CMCP6]
| |
| Length = 314
| |
|
| |
| Score = 248 bits (633), Expect = 3e-064
| |
| Identities = 119/282 (42%), Positives = 189/282 (67%), Gaps = 8/282 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| +IQWFPGHM KA++E+ E + ID++ E++DARIP SS NP+I I KP + +LNK D
| |
| Sbjct: 5 SIQWFPGHMHKAQKEIAEAIPQIDVIIEVLDARIPFSSENPLISKIRGEKPVVKVLNKRD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| AD +T+ W EH E Q +++++I + Q +++I+ +++ + + +
| |
| Sbjct: 65 LADPELTELWIEHLEKEQNVKAMAITTSQTQEVHKILELCRKLAPHREE-------VGKN 117
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPNVGKST+IN LA + IA+TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 118 IRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKV 177
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E+ G RLA TGA+KD+ + +VA + + +L +HYPE+LKERY ++E+PE EL +
| |
| Sbjct: 178 ENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKHYPEKLKERYQIEELPETDVELMEE 237
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG++RG L SGG ++ K +E+++ ++R+ G+++ E+P M
| |
| Sbjct: 238 IGQRRGALRSGGRVDLHKASEILLHELRSGTLGQITLERPEM 279
| |
|
| |
|
| |
| >ref|NP_936634.1| predicted GTPase [Vibrio vulnificus YJ016]
| |
| dbj|BAC96604.1| predicted GTPase [Vibrio vulnificus YJ016]
| |
| Length = 339
| |
|
| |
| Score = 248 bits (633), Expect = 3e-064
| |
| Identities = 119/282 (42%), Positives = 189/282 (67%), Gaps = 8/282 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| +IQWFPGHM KA++E+ E + ID++ E++DARIP SS NP+I I KP + +LNK D
| |
| Sbjct: 30 SIQWFPGHMHKAQKEIAEAIPQIDVIIEVLDARIPFSSENPLISKIRGEKPVVKVLNKRD 89
| |
|
| |
| Query: 62 KADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| AD +T+ W EH E Q +++++I + Q +++I+ +++ + + +
| |
| Sbjct: 90 LADPELTELWIEHLEKEQNVKAMAITTSQTQEVHKILELCRKLAPHREE-------VGKN 142
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPNVGKST+IN LA + IA+TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 143 IRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKV 202
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E+ G RLA TGA+KD+ + +VA + + +L +HYPE+LKERY ++E+PE EL +
| |
| Sbjct: 203 ENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKHYPEKLKERYQIEELPETDVELMEE 262
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG++RG L SGG ++ K +E+++ ++R+ G+++ E+P M
| |
| Sbjct: 263 IGQRRGALRSGGRVDLHKASEILLHELRSGTLGQITLERPEM 304
| |
|
| |
|
| |
| >ref|YP_265263.1| putative GTP binding protein family [Psychrobacter arcticus 273-4]
| |
| gb|AAZ19829.1| putative GTP binding protein family [Psychrobacter arcticus 273-4]
| |
| Length = 318
| |
|
| |
| Score = 247 bits (631), Expect = 4e-064
| |
| Identities = 120/283 (42%), Positives = 185/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| ++IQWFPGHM KAR E+ E + +D+V E++DARIP SS NPM+ + KP I +LNKA
| |
| Sbjct: 5 VSIQWFPGHMNKARNEIKEIMPQMDVVIEVIDARIPYSSENPMVAALRGEKPVIKILNKA 64
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +TQ W ++ E Q G+++++ ++ + +I+ K+++ K R
| |
| Sbjct: 65 DLADPELTQAWMDYLEQQNGVKAIACDTDKANDVKRIIAICKQLVPNKVGT-------GR 117
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| I+A+I+GIPNVGKSTLIN LA + +A+TGD P +T SQQ +K+ ++ L DTPG+LWPK
| |
| Sbjct: 118 QIKAMIMGIPNVGKSTLINTLAGRAVARTGDEPAVTKSQQLIKLDDDIMLYDTPGMLWPK 177
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+E G RLA TG I+D+ + DVA + +L YPE LK RY ++E+P+ E F+
| |
| Sbjct: 178 VENENSGYRLAATGGIRDTAFDFADVASYTAEYLLTAYPELLKTRYKIEELPKTDWEFFE 237
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| G RGC+ +G ++ + +E+++ ++R+ K GR++ E+P M
| |
| Sbjct: 238 IAGRNRGCVRAGNKVDTYRMSEILVNELRSGKIGRITLEKPAM 280
| |
|
| |
|
| |
| >ref|YP_963651.1| GTP-binding protein, HSR1-related [Shewanella sp. W3-18-1]
| |
| gb|ABM25097.1| GTP-binding protein, HSR1-related [Shewanella sp. W3-18-1]
| |
| Length = 313
| |
|
| |
| Score = 247 bits (631), Expect = 4e-064
| |
| Identities = 126/283 (44%), Positives = 185/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVAQLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T QW E+ E QG+++ +I ++ + +I ++++ + D+ +
| |
| Sbjct: 61 DLADPEITAQWIEYLEREQGVKATAITTLQAAMVKKIPDLCRKLVPSR-DKTE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKTQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F ++ YP+ + ERY L E+P+D L +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAKYFLTAYPKEICERYNLSELPKDDVALLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AIG KRG L GG I+ K +E+++ + R+ K G LS E P M
| |
| Sbjct: 234 AIGRKRGALRPGGRIDMHKASELLLHEYRSGKIGLLSLETPAM 276
| |
|
| |
|
| |
| >ref|ZP_01436318.1| GTP-binding [Shewanella baltica OS195]
| |
| ref|YP_001050230.1| GTP-binding protein, HSR1-related [Shewanella baltica OS155]
| |
| gb|EAU25618.1| GTP-binding [Shewanella baltica OS195]
| |
| gb|ABN61361.1| GTP-binding protein, HSR1-related [Shewanella baltica OS155]
| |
| gb|EDJ84347.1| GTP-binding protein, HSR1-related [Shewanella baltica OS185]
| |
| Length = 313
| |
|
| |
| Score = 247 bits (630), Expect = 6e-064
| |
| Identities = 126/283 (44%), Positives = 185/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVAQLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T QW E+ E QG+++ +I ++ + +I ++++ + D+ +
| |
| Sbjct: 61 DLADPEITAQWIEYLEREQGVKATAITTLQAAMVKKIPDICRKLVPSR-DKTE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKTQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F ++ YP+ + ERY L E+P+D L +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAKYFLTAYPKEICERYNLTELPKDDVALLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AIG KRG L GG I+ K +E+++ + R+ K G LS E P M
| |
| Sbjct: 234 AIGRKRGALRPGGRIDMHKASELLLHEYRSGKIGLLSLETPAM 276
| |
|
| |
|
| |
| >gb|EAY41757.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
| |
| Length = 314
| |
|
| |
| Score = 246 bits (629), Expect = 8e-064
| |
| Identities = 119/282 (42%), Positives = 188/282 (66%), Gaps = 8/282 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| +IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NP+I I KP + +LNK D
| |
| Sbjct: 5 SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHIRGEKPCVKVLNKRD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| AD +T+ W H E + G+++++I + N Q +++I+ +++ ++ + +
| |
| Sbjct: 65 LADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEI-------GKN 117
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPNVGKST+IN LA + IA+TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 118 IRTMIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKV 177
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E+ G RLA TGA+KD+ + +VA + + +L ++YPERLKERY +DE+PE EL +
| |
| Sbjct: 178 ENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKYYPERLKERYQIDELPETDVELMEE 237
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L +G ++ K +E+++ ++R G+++ E+P M
| |
| Sbjct: 238 IGRKRGALRAGARVDLHKASEILLHELRQGVLGQITLERPEM 279
| |
|
| |
|
| |
| >ref|ZP_01605053.1| GTP-binding protein, HSR1-related [Shewanella pealeana ATCC 700345]
| |
| gb|EAV97445.1| GTP-binding protein, HSR1-related [Shewanella pealeana ATCC 700345]
| |
| Length = 312
| |
|
| |
| Score = 246 bits (628), Expect = 1e-063
| |
| Identities = 125/283 (44%), Positives = 185/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM++ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEVMPQVDLVIEVLDARIPYSSENPMVQTLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD TQ+W E+ E QG+++++I ++ + +I ++ + + D++ +
| |
| Sbjct: 61 DLADPETTQRWIEYLEREQGVKAMAITTLQAGQVKKIPDLCRKFVPSR-DKIE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRMIAKTGNEPAVTKTQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F + YPE + ERY + ++P+ EL +
| |
| Sbjct: 174 VDNEKSSYRLAVTGAIKDTAMEYEDVAMFAAEYFLTAYPEAIAERYKIKQMPDTDIELLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AIG RG L GG I+ K +EV++ D R + G+LS E P M
| |
| Sbjct: 234 AIGRNRGALRPGGRIDLHKASEVLLHDFRAGRIGQLSLETPEM 276
| |
|
| |
|
| |
| >ref|YP_075302.1| hypothetical protein STH1473 [Symbiobacterium thermophilum IAM
| |
| 14863]
| |
| dbj|BAD40458.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
| |
| 14863]
| |
| Length = 286
| |
|
| |
| Score = 246 bits (628), Expect = 1e-063
| |
| Identities = 123/279 (44%), Positives = 181/279 (64%), Gaps = 2/279 (0%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAKARR + E L+D+V E+VDAR P++SRNP + ++ +KP++++LNKAD
| |
| Sbjct: 2 IQWFPGHMAKARRILQENAPLVDVVLEIVDARCPLASRNPDLMALVAHKPQVLILNKADL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD A T+ W E G ++++++V G G +++ A + AKG KPR R
| |
| Sbjct: 62 ADPAATRLWVERLNEPGRPAVALDAVRGTGAREVLAAIRRAFAPVLRAWTAKGRKPRPAR 121
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| + +GIPNVGKS+ INRL A GD+PG+T +QW+++GK++ELLD PGIL PKFED
| |
| Sbjct: 122 VMAVGIPNVGKSSAINRLVGARRAPVGDKPGVTRGKQWIRIGKDVELLDMPGILVPKFED 181
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEI-PEDIAELFDAI 241
| |
| + GL LA TGAIKD + + ++VA L + E + ERYGL + PE +A L +AI
| |
| Sbjct: 182 QRDGLLLAATGAIKDEVFDQREVANHLLHLIWESLGAAVAERYGLTRLDPEPVANL-EAI 240
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| G RG L +G ++ D ++++R+ R + GR++ + P
| |
| Sbjct: 241 GRFRGLLRAGEQVDLDAAAQLVLREFREGRLGRVTLQPP 279
| |
|
| |
|
| |
| >ref|YP_581544.1| GTP-binding [Psychrobacter cryohalolentis K5]
| |
| gb|ABE76060.1| GTP-binding [Psychrobacter cryohalolentis K5]
| |
| Length = 318
| |
|
| |
| Score = 246 bits (628), Expect = 1e-063
| |
| Identities = 120/283 (42%), Positives = 184/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| ++IQWFPGHM KAR E+ E + +D+V E++DARIP SS NPM+ + KP I +LNKA
| |
| Sbjct: 5 VSIQWFPGHMNKARNEIKEIMPQMDVVIEVIDARIPYSSENPMVAALRGEKPVIKILNKA 64
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +TQ W ++ E Q G+++++ ++ + +I+ K+++ K R
| |
| Sbjct: 65 DLADPELTQAWMDYLEQQNGVKAIACDTDKANDVKRIIAICKQLVPNKVGT-------GR 117
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| I+A+I+GIPNVGKSTLIN LA + +A+TGD P +T SQQ +K+ ++ L DTPG+LWPK
| |
| Sbjct: 118 QIKAMIMGIPNVGKSTLINTLAGRAVARTGDEPAVTKSQQLIKLDDDIMLYDTPGMLWPK 177
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+E G RLA TG I+D+ + DVA + +L YPE LK RY ++E+P+ E F+
| |
| Sbjct: 178 VENENSGYRLAATGGIRDTAFDFADVAGYTAEYLLTAYPELLKTRYKIEELPKTDWEFFE 237
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| G RGC+ +G ++ + +E+++ ++R+ K GR++ E P M
| |
| Sbjct: 238 IAGRNRGCVRAGNKVDTYRMSEILVNELRSGKIGRITLETPAM 280
| |
|
| |
|
| |
| >ref|YP_857295.1| GTP-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
| |
| 7966]
| |
| gb|ABK39352.1| GTP-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
| |
| 7966]
| |
| Length = 316
| |
|
| |
| Score = 246 bits (627), Expect = 1e-063
| |
| Identities = 120/283 (42%), Positives = 181/283 (63%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+I WFPGHM KAR+E+ E + +D++ E++DARIP SS NP++ ++ + P I +LNKA
| |
| Sbjct: 1 MSINWFPGHMHKARKEIAEVMPQVDVIIEMLDARIPFSSENPLVPELRGDTPVIKVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T+ W H E + GI++L + + + Q++ E+L E+ ++ R
| |
| Sbjct: 61 DLADPEITELWVAHMEQEKGIKALPLTQQEPEKIKQLLTLCHEMLPER-------NLELR 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +RA+I+GIPNVGKSTLIN LA + IA+TG+ G+T SQQ +K+ + L DTPG LWPK
| |
| Sbjct: 114 GVRAMIMGIPNVGKSTLINTLAGRIIARTGNEAGVTKSQQRIKLDNNVILTDTPGFLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| G RLA+T AIKD++ + D+A+F + + YPER++ RY L E+PE EL +
| |
| Sbjct: 174 LNPPSCGYRLAITAAIKDTVFDYADIAMFAADYFIKAYPERIQTRYQLSELPETEIELLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| I +RG + GGL + K +E+++ + R+ GR+S E P M
| |
| Sbjct: 234 LIARQRGFMRKGGLADLHKASEILVNEFRSGLLGRISLETPAM 276
| |
|
| |
|
| |
| >ref|ZP_01065004.1| putative GTPase YlqF [Vibrio sp. MED222]
| |
| gb|EAQ53667.1| putative GTPase YlqF [Vibrio sp. MED222]
| |
| Length = 311
| |
|
| |
| Score = 246 bits (627), Expect = 1e-063
| |
| Identities = 122/283 (43%), Positives = 188/283 (66%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NPMI + +KP + +LNK
| |
| Sbjct: 1 MSIQWFPGHMHKARKEIEEVIPQVDVIIEVLDARIPFSSENPMISSLRGDKPCVKVLNKR 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T++W EHFE QG+++++I + + +N ++ E++++ G +
| |
| Sbjct: 61 DLADPELTERWIEHFEKEQGVKAIAITTSAKEEVNHVM----ELVRKLAPHREQMG---K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IA TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 114 NIRTMIMGIPNVGKSTIINCLAGRTIAVTGNQPAVTRRQQRINLQNGVILSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+ G RLA TGA+KD+ + +VA + + +L + YP L+ERY ++E+PE EL +
| |
| Sbjct: 174 VENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKQYPNLLQERYQIEELPESDIELME 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AIG KRG L +GG I+ K +E+++ ++R G+++ E P M
| |
| Sbjct: 234 AIGRKRGALRAGGHIDIHKCSEILLHELRNGTLGKVTLELPEM 276
| |
|
| |
|
| |
| >ref|ZP_00990469.1| putative GTPase YlqF [Vibrio splendidus 12B01]
| |
| gb|EAP94567.1| putative GTPase YlqF [Vibrio splendidus 12B01]
| |
| Length = 311
| |
|
| |
| Score = 246 bits (627), Expect = 1e-063
| |
| Identities = 122/283 (43%), Positives = 189/283 (66%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NPMI + +KP + +LNK
| |
| Sbjct: 1 MSIQWFPGHMHKARKEIEEVIPQVDVIIEVLDARIPFSSENPMISSLRGDKPCVKVLNKR 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T++W EHFE QG+++++I + + +N ++ E++++ G +
| |
| Sbjct: 61 DLADPELTERWIEHFEKEQGVKAIAITTSVKEEVNHVM----ELVRKLAPHREQMG---K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IA TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 114 NIRTMIMGIPNVGKSTIINCLAGRTIAVTGNQPAVTRRQQRINLQNGVILSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+ G RLA TGA+KD+ + +VA + + +L + YP L+ERY ++E+PE EL +
| |
| Sbjct: 174 VENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKQYPHLLQERYQIEELPESDIELME 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AIG KRG L +GG I+ K +E+++ ++R+ G+++ E P M
| |
| Sbjct: 234 AIGRKRGALRAGGHIDIHKCSEILLHELRSGTLGKVTLELPEM 276
| |
|
| |
|
| |
| >ref|YP_870030.1| GTP-binding [Shewanella sp. ANA-3]
| |
| gb|ABK48624.1| GTP-binding [Shewanella sp. ANA-3]
| |
| Length = 313
| |
|
| |
| Score = 246 bits (627), Expect = 1e-063
| |
| Identities = 128/283 (45%), Positives = 183/283 (64%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVSKLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T QW E+ E QG+++ +I ++ G+ +++P L D+ +
| |
| Sbjct: 61 DLADPEITAQWIEYLEREQGVKATAITTLQ-PGMLKMLPDLCRKLVPSRDKTE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T SQQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKSQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F + + YP+ + ERY + E+P+D L +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAGYFLKAYPKEICERYNISELPKDDMALLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L GG I+ K +EV++ D R+ + G LS E P M
| |
| Sbjct: 234 EIGRKRGALRPGGRIDLHKASEVVLHDYRSGRIGLLSLETPAM 276
| |
|
| |
|
| |
| >ref|ZP_01707629.1| GTP-binding [Shewanella putrefaciens 200]
| |
| gb|EAY52030.1| GTP-binding [Shewanella putrefaciens 200]
| |
| Length = 313
| |
|
| |
| Score = 245 bits (626), Expect = 2e-063
| |
| Identities = 125/283 (44%), Positives = 184/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVAQLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T QW E+ E QG+++ +I ++ + +I ++++ + D+ +
| |
| Sbjct: 61 DLADPEITAQWIEYLEREQGVKATAITTLQAAMVKKIPDLCRKLVPSR-DKTE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKTQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F ++ YP+ + ERY L E+P+D L +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAKYFLTAYPKEICERYNLSELPKDDVALLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L GG I+ K +E+++ + R+ K G LS E P M
| |
| Sbjct: 234 EIGRKRGALRPGGRIDMHKASELLLHEYRSGKIGLLSLETPAM 276
| |
|
| |
|
| |
| >ref|YP_563309.1| GTP-binding [Shewanella denitrificans OS217]
| |
| gb|ABE55586.1| GTP-binding [Shewanella denitrificans OS217]
| |
| Length = 313
| |
|
| |
| Score = 245 bits (626), Expect = 2e-063
| |
| Identities = 125/283 (44%), Positives = 184/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPMI + +KP I LLNKA
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMIAQLRGDKPCIKLLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T QW E+ E QG+++ +I ++ + +I ++++ + + +
| |
| Sbjct: 61 DLADPEITAQWIEYLEQEQGVKASAITTLQPGMVKRIPDICRKLVPHR-------DITEK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKNQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F + + YP+ + ERY L E+P+D L +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAAYFLKAYPDAICERYKLKELPKDDMALLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AIG RG L GG I+Y K +E+++ + R+ + G L+ E P M
| |
| Sbjct: 234 AIGRSRGALRPGGRIDYHKVSELLLHEYRSGQIGLLTLETPAM 276
| |
|
| |
|
| |
| >ref|NP_800222.1| putative GTPase YlqF [Vibrio parahaemolyticus RIMD 2210633]
| |
| dbj|BAC62055.1| putative GTPase YlqF [Vibrio parahaemolyticus RIMD 2210633]
| |
| Length = 314
| |
|
| |
| Score = 245 bits (626), Expect = 2e-063
| |
| Identities = 119/282 (42%), Positives = 184/282 (65%), Gaps = 8/282 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| +IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NPMI I KP + +LNK D
| |
| Sbjct: 5 SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPMISKIRGEKPVVKVLNKRD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| AD +TQ W +H E Q +++++I + Q +++I+ +++ + + +
| |
| Sbjct: 65 LADPELTQLWIDHLEKEQNVKAMAITTSEPQEVHKIMELCRKLAPHREE-------VGKN 117
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPNVGKST+IN LA + IA TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 118 IRTMIMGIPNVGKSTIINTLAGRTIAVTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKV 177
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E+ G RLA TGA+KD+ + +VA + + +L HYPERLKERY ++E+PE E+ +
| |
| Sbjct: 178 ENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAAHYPERLKERYQIEELPESDIEIMEE 237
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG +RG L +GG ++ K +E+++ ++R G+++ E P M
| |
| Sbjct: 238 IGRRRGALRAGGRVDLHKVSEILLHELRQGTLGQITLELPEM 279
| |
|
| |
|
| |
| >ref|YP_734316.1| GTP-binding [Shewanella sp. MR-4]
| |
| ref|YP_738308.1| GTP-binding protein [Shewanella sp. MR-7]
| |
| gb|ABI39259.1| GTP-binding [Shewanella sp. MR-4]
| |
| gb|ABI43251.1| GTP-binding protein [Shewanella sp. MR-7]
| |
| Length = 313
| |
|
| |
| Score = 245 bits (626), Expect = 2e-063
| |
| Identities = 128/283 (45%), Positives = 183/283 (64%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVSKLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T QW E+ E QG+++ +I ++ G+ +++P L D+ +
| |
| Sbjct: 61 DLADPDITAQWIEYLEREQGVKATAITTLQ-PGMLKMLPDLCRKLVPSRDKTE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T SQQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKSQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F + + YP+ + ERY + E+P+D L +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAGYFLKAYPKEICERYNISELPKDDMALLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L GG I+ K +EV++ D R+ + G LS E P M
| |
| Sbjct: 234 EIGRKRGALRPGGRIDLHKASEVVLHDYRSGRIGLLSLETPAM 276
| |
|
| |
|
| |
| >ref|ZP_00813928.1| GTP-binding [Shewanella putrefaciens CN-32]
| |
| gb|ABP75477.1| GTP-binding protein, HSR1-related [Shewanella putrefaciens CN-32]
| |
| Length = 313
| |
|
| |
| Score = 245 bits (626), Expect = 2e-063
| |
| Identities = 125/283 (44%), Positives = 184/283 (65%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVAQLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T QW E+ E QG+++ +I ++ + +I ++++ + D+ +
| |
| Sbjct: 61 DLADPEITAQWIEYLEREQGVKATAITTLQAAMVKKIPDLCRKLVPSR-DKTE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKTQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F ++ YP+ + ERY L E+P+D L +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAKYFLTAYPKEICERYNLSELPKDDVALLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L GG I+ K +E+++ + R+ K G LS E P M
| |
| Sbjct: 234 EIGRKRGALRPGGRIDMHKASELLLHEYRSGKIGLLSLETPAM 276
| |
|
| |
|
| |
| >ref|YP_391323.1| GTP-binding [Thiomicrospira crunogena XCL-2]
| |
| gb|ABB41649.1| GTPase family protein [Thiomicrospira crunogena XCL-2]
| |
| Length = 315
| |
|
| |
| Score = 245 bits (625), Expect = 2e-063
| |
| Identities = 130/288 (45%), Positives = 188/288 (65%), Gaps = 14/288 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KA++E+ E L +D++ E++DARIP SS NPMI ++ +KP + + NK+
| |
| Sbjct: 1 MQIQWYPGHMHKAQKEIREILPQVDMIIEVLDARIPFSSENPMIANLRGDKPTLKIFNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFE-NQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A T+ W+ +FE ++ I++L++N+ Q++ K+++ K A+ VK
| |
| Sbjct: 61 DLADPAQTEAWQAYFEQSKNIKTLALNAQQADRKIQVLGIIKKMIPRK-----AESVK-- 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| I ALI+GIPNVGKSTLIN LA + IAKTG+ P +T Q +K+ + L D+PG+LWP
| |
| Sbjct: 114 VIHALIMGIPNVGKSTLINTLASRPIAKTGNEPAVTKILQRIKLEDGITLFDSPGMLWPN 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIP-----EDI 234
| |
| E+E G RLA+TG IK++ L D+A + +L + YPERL ERY LD +P D+
| |
| Sbjct: 174 IENEHSGYRLAITGGIKETAFELPDIASYAAEYLMQAYPERLLERYDLDALPIHDPAPDV 233
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| A L + IG RGCL+SGG +N DK + + I +IR GRL+FE P +
| |
| Sbjct: 234 AFL-EQIGRTRGCLVSGGQVNLDKISRIFITEIRDGLLGRLTFETPDL 280
| |
|
| |
|
| |
| >ref|ZP_01271495.1| GTP-binding protein [Psychrobacter sp. PRwf-1]
| |
| gb|EAS87367.1| GTP-binding protein [Psychrobacter sp. PRwf-1]
| |
| Length = 323
| |
|
| |
| Score = 244 bits (624), Expect = 3e-063
| |
| Identities = 125/287 (43%), Positives = 182/287 (63%), Gaps = 13/287 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKN-----KPRIML 56
| |
| +IQWFPGHM KAR E+ E + +D+V E++DARIP SS NPM+ + N KP I +
| |
| Sbjct: 6 SIQWFPGHMNKARNEIKEIMPDMDVVIEVIDARIPFSSENPMVAALRSNEAGFQKPVIKI 65
| |
|
| |
| Query: 57 LNKADKADAAVTQQWKEHFENQG-IRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKG 115
| |
| LNKAD AD +TQ W E E Q +++++ + + +I+ K+++ K
| |
| Sbjct: 66 LNKADLADPELTQIWIEQLEQQSQVKAIACDDNKANDVKRIIQMCKDLIPNKVGT----- 120
| |
|
| |
| Query: 116 VKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGI 175
| |
| R I+ LI+GIPNVGKSTLIN LA ++IA+TGD P +T SQQ +K+ ++ L DTPG+
| |
| Sbjct: 121 --GRQIKVLIMGIPNVGKSTLINTLAGRSIARTGDEPAVTKSQQLIKIDDDIMLYDTPGM 178
| |
|
| |
| Query: 176 LWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIA 235
| |
| LWPK E+ G RLA TG IKD+ + DVA + +L + YPE LKERY +DE+P+
| |
| Sbjct: 179 LWPKIENPNSGFRLAATGGIKDTAFDFSDVAGYTAEYLIKAYPELLKERYKIDELPQSDW 238
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| E F+ G RG L GG+++ + +E++I ++R+ + GR++ E P M
| |
| Sbjct: 239 EFFEMAGRNRGFLKKGGVVDTYRMSEILINELRSGQLGRITLETPAM 285
| |
|
| |
|
| |
| >ref|ZP_01221929.1| putative GTPase [Photobacterium profundum 3TCK]
| |
| gb|EAS41521.1| putative GTPase [Photobacterium profundum 3TCK]
| |
| Length = 314
| |
|
| |
| Score = 244 bits (624), Expect = 3e-063
| |
| Identities = 125/282 (44%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NPMI + KP + +LNK D
| |
| Sbjct: 5 IQWFPGHMHKARKEIEEAIPKVDVIIEVLDARIPFSSENPMISSLRGEKPVVKVLNKRDL 64
| |
|
| |
| Query: 63 ADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD +T+ W H E QG+++++I + N +NQI+ +++ + A G + I
| |
| Sbjct: 65 ADPEMTEMWIAHLEKEQGVKAIAITTENIAEVNQIMELCRKLAPGR----EAMG---KNI 117
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +I+GIPNVGKST+IN +A + IA TG++P +T QQ + + + L DTPGILWPK E
| |
| Sbjct: 118 RTMIMGIPNVGKSTIINVIAGRTIAVTGNQPAVTRQQQRINLQNGIVLSDTPGILWPKVE 177
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL-DEIPEDIAELFDA 240
| |
| + G RLA TGA+KD+ ++ DVA F + +L YP+ +K RY L DE+PE EL +
| |
| Sbjct: 178 NPHSGFRLAATGAVKDTAMDYTDVAFFTIEYLAAAYPDLIKARYDLDDELPETDIELMEE 237
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRGCL GG I+ K +E++I ++R G+++ E+P M
| |
| Sbjct: 238 IGRKRGCLRPGGRIDIHKASEILINELRNGVLGKITMERPEM 279
| |
|
| |
|
| |
| >ref|YP_132821.1| putative GTPase [Photobacterium profundum SS9]
| |
| emb|CAG23021.1| putative GTPase [Photobacterium profundum SS9]
| |
| Length = 331
| |
|
| |
| Score = 244 bits (623), Expect = 4e-063
| |
| Identities = 125/282 (44%), Positives = 183/282 (64%), Gaps = 9/282 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NPMI + KP + +LNK D
| |
| Sbjct: 22 IQWFPGHMHKARKEIEEAIPKVDVIIEVLDARIPFSSENPMISSLRGEKPVVKVLNKRDL 81
| |
|
| |
| Query: 63 ADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD +T+ W H E QG+++++I + N +NQI+ +++ + A G + I
| |
| Sbjct: 82 ADPEMTEMWIAHLEKEQGVKAIAITTENIAEVNQIMELCRKLAPGR----EAMG---KNI 134
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +I+GIPNVGKST+IN +A + IA TG++P +T QQ + + + L DTPGILWPK E
| |
| Sbjct: 135 RTMIMGIPNVGKSTIINVIAGRAIAVTGNQPAVTRQQQRINLQNGIVLSDTPGILWPKVE 194
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL-DEIPEDIAELFDA 240
| |
| + G RLA TGA+KD+ ++ DVA F + +L YP+ +K RY L DE+PE EL +
| |
| Sbjct: 195 NPHSGFRLAATGAVKDTAMDYTDVAFFTIEYLAAAYPDLIKARYDLDDELPETDIELMEE 254
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRGCL GG I+ K +E++I ++R G+++ E+P M
| |
| Sbjct: 255 IGRKRGCLRPGGRIDIHKASEILINELRNGTLGKITMERPEM 296
| |
|
| |
|
| |
| >ref|NP_718176.1| GTP-binding protein [Shewanella oneidensis MR-1]
| |
| gb|AAN55620.1|AE015700_4 GTP-binding protein [Shewanella oneidensis MR-1]
| |
| Length = 313
| |
|
| |
| Score = 243 bits (620), Expect = 8e-063
| |
| Identities = 127/283 (44%), Positives = 183/283 (64%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVSKLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD VT QW E+ E QG+++ +I ++ G+ +++P L D+ +
| |
| Sbjct: 61 DLADPEVTAQWIEYLEREQGVKATAITTLQ-PGMLKMLPDLCRKLVPSRDKTE------K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T +QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRVIAKTGNEPAVTKTQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F + + YP+ + ERY + E+P+D L +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVALFAAGYFLKAYPKEICERYNISELPKDDMALLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L GG I+ K +E+++ + R+ K G LS E P M
| |
| Sbjct: 234 EIGRKRGALRPGGRIDLHKASELLLHEYRSGKIGLLSLETPAM 276
| |
|
| |
|
| |
| >ref|YP_750176.1| GTP-binding [Shewanella frigidimarina NCIMB 400]
| |
| gb|ABI71338.1| GTP-binding [Shewanella frigidimarina NCIMB 400]
| |
| Length = 313
| |
|
| |
| Score = 243 bits (620), Expect = 8e-063
| |
| Identities = 124/283 (43%), Positives = 178/283 (62%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGHM KAR+E+ E + +D+V E++DARIP SS NPM+ + +KP I LLNK+
| |
| Sbjct: 1 MAIQWYPGHMHKARKEIEEAMPQVDLVIEVLDARIPYSSENPMVSQLRGDKPCIKLLNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD VT QW E+ E QG+++ +I S+ + I ++++ + + +
| |
| Sbjct: 61 DLADPKVTAQWIEYLEREQGVQASAITSLQPSMVKSIPDLCRKLVPHR-------DIMEK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +I+GIPNVGKST+IN LA + IAKTG+ P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 114 DIRTMIMGIPNVGKSTIINTLAGRTIAKTGNEPAVTRRQQRINLRNGIVLSDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E RLAVTGAIKD+ + +DVA+F + E YP+ + ERY L +P EL +
| |
| Sbjct: 174 VDNEASSYRLAVTGAIKDTAMEYEDVAMFAAGYFLEAYPDEICERYKLQSLPASDIELLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AI RG L G ++Y K +E+++ + R+ K G LS E P M
| |
| Sbjct: 234 AISRSRGALRPGARVDYHKVSELLLHEYRSGKIGLLSLETPAM 276
| |
|
| |
|
| |
| >ref|YP_001141376.1| conserved GTP-binding protein [Aeromonas salmonicida subsp.
| |
| salmonicida A449]
| |
| gb|ABO89628.1| conserved GTP-binding protein [Aeromonas salmonicida subsp.
| |
| salmonicida A449]
| |
| Length = 316
| |
|
| |
| Score = 242 bits (618), Expect = 1e-062
| |
| Identities = 120/283 (42%), Positives = 179/283 (63%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+I WFPGHM KAR+E+ E + +D++ E++DARIP SS NP++ ++ + P I +LNKA
| |
| Sbjct: 1 MSINWFPGHMHKARKEIAEVMPQVDVIIEMLDARIPFSSENPLVPELRGDTPVIKVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T W H E + GI++L + + + Q++ E+L E+ ++ R
| |
| Sbjct: 61 DLADPEITALWVAHMEKEKGIKALPLTQQEPEKIKQLLTLCHEMLPER-------NLELR 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +RA+I+GIPNVGKSTLIN LA + IA+TG+ G+T SQQ +K+ + L DTPG LWPK
| |
| Sbjct: 114 GVRAMIMGIPNVGKSTLINTLAGRIIARTGNEAGVTKSQQRIKLDNNVVLTDTPGFLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| G RLA+T AIKD++ + D+A+F + + YPER+K RY + E+PE EL +
| |
| Sbjct: 174 LNPPSCGYRLAITAAIKDTVFDYADIAMFAADYFIKAYPERIKARYQIAELPETEIELLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| I +R + GGL + K +E++I + R+ GR+S E P M
| |
| Sbjct: 234 MIARQRAFVRKGGLADLHKASEILINEFRSGLLGRISLETPEM 276
| |
|
| |
|
| |
| >ref|ZP_01189808.1| GTP-binding [Halothermothrix orenii H 168]
| |
| gb|EAR78653.1| GTP-binding [Halothermothrix orenii H 168]
| |
| Length = 282
| |
|
| |
| Score = 242 bits (617), Expect = 2e-062
| |
| Identities = 127/288 (44%), Positives = 190/288 (65%), Gaps = 16/288 (5%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| +QW+P HMA+AR+ + E LKL+DIV E++DARIP SS+NP I+ IL NK R+++LNK D
| |
| Sbjct: 2 VQWYPSHMARARKVLIENLKLVDIVVEVLDARIPASSKNPDIDSILDNKKRVIVLNKIDL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDR----MRAKGVKP 118
| |
| A +T W ++F + + +NS+ G+G+ ++ K +L+ + +R + KG +
| |
| Sbjct: 62 AHPDLTSTWLDYFR-RSYPVMGVNSITGEGIGEL----KRLLRNEGERINKVLEEKGRQQ 116
| |
|
| |
| Query: 119 RAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWP 178
| |
| R +R ++IGIPNVGKS +N LA N KTG+RPG+T +QW+K+GK ++LLDTPGILWP
| |
| Sbjct: 117 RPVRIMVIGIPNVGKSAFLNILAGSNRVKTGNRPGVTRGKQWLKLGKGVQLLDTPGILWP 176
| |
|
| |
| Query: 179 KFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEI----PEDI 234
| |
| K EDE G +LA+TGAI ++ + + A + +L + E L++ Y + P DI
| |
| Sbjct: 177 KIEDEETGHKLAITGAIDENNYDKETAAYKLVCYLMDIDSEILEKTYNIGIYEGLHPYDI 236
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| EL IG++RGC MSGG I+ KT+E+I+ D R K GR++ E+P +
| |
| Sbjct: 237 VEL---IGKQRGCYMSGGKIDRHKTSEIILNDFRRGKMGRITLEKPEL 281
| |
|
| |
|
| |
| >ref|ZP_01260611.1| putative GTPase YlqF [Vibrio alginolyticus 12G01]
| |
| ref|ZP_01476403.1| hypothetical protein VEx2w_02001070 [Vibrio sp. Ex25]
| |
| gb|EAS76125.1| putative GTPase YlqF [Vibrio alginolyticus 12G01]
| |
| Length = 314
| |
|
| |
| Score = 241 bits (615), Expect = 3e-062
| |
| Identities = 116/282 (41%), Positives = 185/282 (65%), Gaps = 8/282 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| +IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NP+I I +KP + +LNK D
| |
| Sbjct: 5 SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISQIRGDKPVVKVLNKRD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| AD +TQ W EH E Q +++++I + Q +++I+ +++ + + +
| |
| Sbjct: 65 LADPELTQLWIEHLEQEQHVKAMAITTSEPQEVHRIMELCRKLAPHREEI-------GKN 117
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPNVGKST+IN LA + IA TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 118 IRTMIMGIPNVGKSTIINTLAGRTIAVTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKV 177
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E+ G RLA TGA+KD+ + +VA + + +L HY ++LKERY ++E+PE E+ +
| |
| Sbjct: 178 ENPHSGFRLAATGAVKDTAMEYDEVAFYTIEYLAAHYADKLKERYQIEELPESDIEIMEE 237
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG +RG L +GG ++ K +E+++ ++R G+++ E+P M
| |
| Sbjct: 238 IGRRRGALRAGGRVDLHKVSEILLHELRQGTLGQITLERPEM 279
| |
|
| |
|
| |
| >ref|YP_341427.1| tRNA modification protein [Pseudoalteromonas haloplanktis TAC125]
| |
| emb|CAI87985.1| putative tRNA modification protein [Pseudoalteromonas haloplanktis
| |
| TAC125]
| |
| Length = 317
| |
|
| |
| Score = 241 bits (614), Expect = 4e-062
| |
| Identities = 121/281 (43%), Positives = 183/281 (65%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHM KAR E+ E + +D++ E++DARIP SS NPM+ + + KP I +LNKAD
| |
| Sbjct: 6 IQWFPGHMNKARNEIKEIMPQMDVIIEVLDARIPYSSENPMVATLREGKPVIKILNKADL 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD +TQ WK++FE + G+++++ + +++I K+++ K + I
| |
| Sbjct: 66 ADPKMTQIWKDYFEQENGVKAIAFGNDKAAEVHRINELCKKLVPHKVGA-------DKQI 118
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| +A+I+GIPNVGKSTLIN LA + +AKTG+ P +T +QQ +K+ + L DTPG+LWPK E
| |
| Sbjct: 119 KAMIMGIPNVGKSTLINVLAGRIVAKTGNEPAVTKAQQRIKLEDGIMLYDTPGMLWPKVE 178
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| +E G RL TGAI+D+ + ++VA + +L + YPE LK RY +DE+PE E +
| |
| Sbjct: 179 NENSGYRLGATGAIRDTALEYEEVASYTAEYLIKAYPELLKTRYKIDELPESDWEFVELA 238
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| G+KRGC+ G I+ K +E++I ++R GR++ E P M
| |
| Sbjct: 239 GKKRGCIRGGNQIDTYKMSEILINELRDGIIGRITMETPQM 279
| |
|
| |
|
| |
| >ref|ZP_01613912.1| putative tRNA modification protein [Alteromonadales bacterium TW-7]
| |
| gb|EAW26855.1| putative tRNA modification protein [Alteromonadales bacterium TW-7]
| |
| Length = 314
| |
|
| |
| Score = 240 bits (612), Expect = 7e-062
| |
| Identities = 121/283 (42%), Positives = 182/283 (64%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM KAR E+ E + +D++ E++DARIP SS NPM+ + + KP I +LNKA
| |
| Sbjct: 1 MAIQWFPGHMNKARNEIKEIMPQMDVIIEVLDARIPYSSENPMVTTLREGKPVIKILNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +TQ W+++FE + G+++++ +++I K+++ K +
| |
| Sbjct: 61 DLADPKMTQVWRDYFEQESGVKAIAFGHDKAAEVHRINELCKKLVPHKVGA-------DK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| I+A+I+GIPNVGKSTLIN LA + +AKTG+ P +T +QQ +K+ + L DTPG+LWPK
| |
| Sbjct: 114 QIKAMIMGIPNVGKSTLINVLAGRIVAKTGNEPAVTKAQQRIKLEDGIMLYDTPGMLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+E G RL TGAI+D+ + ++VA + +L YPE LK RY L+E+PE E +
| |
| Sbjct: 174 VENENSGYRLGATGAIRDTALEYEEVASYTAEYLLHAYPELLKARYKLNELPESDWEFVE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| G+KRGC+ G I+ K +E++I ++R GR++ E P M
| |
| Sbjct: 234 MAGKKRGCIRGGNQIDTYKMSEILINELRDGIIGRITMETPAM 276
| |
|
| |
|
| |
| >gb|EDJ81030.1| GTP-binding protein, HSR1-related [Geobacter bemidjiensis Bem]
| |
| Length = 299
| |
|
| |
| Score = 239 bits (611), Expect = 9e-062
| |
| Identities = 117/281 (41%), Positives = 182/281 (64%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTI+W+PGHM+KA +++E ++ ID++ E++DAR+P SS N ++E + +NKP I +LNK
| |
| Sbjct: 1 MTIKWYPGHMSKALEQISELVRKIDVIIEVLDARLPFSSSNHLLEQVRRNKPCIKVLNKN 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A+T+ W +HF+ G+R+L + + N + +V K++ + G
| |
| Sbjct: 61 DLADPAITRAWVQHFQKASGVRALPLVAKNIPEVKNLVKLIKQVCPNR-------GNPGY 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IR +++GIPNVGKSTLIN LA K++AK GD+P +T Q + + + L DTPG+LWP
| |
| Sbjct: 114 PIRTMVVGIPNVGKSTLINTLAGKSLAKVGDKPAVTLKPQQIDLRNGILLFDTPGLLWPV 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| +D+ RLA +GAI + ++ +V VF ++ YPE LKERY L E+PE E+ +
| |
| Sbjct: 174 MDDQGGAYRLAASGAIGANALDYTNVGVFAAAYMMRRYPELLKERYKLAELPELPYEVVE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| A+G GCLM+GG+++ + E +R++R K GR+SFE+P
| |
| Sbjct: 234 AVGRCLGCLMTGGVVDVHRAAETFLRELRAGKAGRISFEEP 274
| |
|
| |
|
| |
| >ref|YP_754165.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str.
| |
| Goettingen]
| |
| gb|ABI68794.1| GTP-binding protein [Syntrophomonas wolfei subsp. wolfei str.
| |
| Goettingen]
| |
| Length = 278
| |
|
| |
| Score = 239 bits (611), Expect = 9e-062
| |
| Identities = 113/278 (40%), Positives = 186/278 (66%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTI WFPGHM KARRE+ + +KL+DI L+DAR P S RN +E I +NK +M+LNKA
| |
| Sbjct: 1 MTINWFPGHMVKARREIEKNIKLVDIALILLDARAPFSCRNSDLEKIARNKKVVMVLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D A +++ + E +G +++S++G+G ++ +K +EK + ++ KG +PRA
| |
| Sbjct: 61 DLASPEAIRRYMQALEQEGFLVATMDSLSGKGRQAVLRMAKSAFREKAEELQRKGRRPRA 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IRA+++G+PN+GKST +N L + IA+TG +PG+T +QWV++ +++ELLDTPG++WP+
| |
| Sbjct: 121 IRAMVMGVPNIGKSTFLNCLVGQKIAQTGAKPGVTRGKQWVRLHEDIELLDTPGLMWPRV 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E E GL+LA+ + ++ + +V ++ L L++ +P+ L E+ GLD + E+ A
| |
| Sbjct: 181 ESEEQGLKLALLDIVGENAYSEYEVGLYLLSILKDKHPQILLEKLGLDVGNQLEEEMLAA 240
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| I KRG L+ GG+ + DKT +V++++ R K G +S +
| |
| Sbjct: 241 IARKRGYLLKGGVPDLDKTCQVLLQEFRRGKLGTISLD 278
| |
|
| |
|
| |
| >ref|YP_901812.1| GTP-binding protein, HSR1-related [Pelobacter propionicus DSM 2379]
| |
| gb|ABK99754.1| GTP-binding protein, HSR1-related [Pelobacter propionicus DSM 2379]
| |
| Length = 305
| |
|
| |
| Score = 239 bits (611), Expect = 9e-062
| |
| Identities = 118/282 (41%), Positives = 187/282 (66%), Gaps = 10/282 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTI+W+PGHM KA ++ E ++ ID++ E++DAR+P SS N ++E I + KP I +LNK
| |
| Sbjct: 1 MTIRWYPGHMDKALEQMAETVRRIDVIIEVLDARLPSSSSNHLLEGIRRTKPCIKVLNKN 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEI-LQEKFDRMRAKGVKP 118
| |
| D AD A+T+ W HFE Q G+++L +++ Q+ A K I L ++ R K P
| |
| Sbjct: 61 DLADPAITKAWVRHFEAQAGVKALPLSA------RQLADAKKLIKLCQRLVPHRGKPGWP 114
| |
|
| |
| Query: 119 RAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWP 178
| |
| +R ++ GIPNVGKSTLIN LA +++A+ GD+P ITT Q + + + L DTPG+LWP
| |
| Sbjct: 115 --LRVMVFGIPNVGKSTLINTLAGRSLARVGDKPAITTCAQQIDLKNGIILSDTPGVLWP 172
| |
|
| |
| Query: 179 KFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELF 238
| |
| + +D++ RLA +GAI ++ VA+F ++ + YP+ ++ERY L E+P++ L
| |
| Sbjct: 173 EMDDQVAAKRLAASGAIGSGAFDVVTVALFAAEYMMQRYPQTIRERYKLAELPDNPTTLL 232
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| DA+G + GCL+SGG +++++ E +R++R+ K GR+SFE+P
| |
| Sbjct: 233 DAVGRRLGCLISGGTVDHNRAAEAFLRELRSGKLGRISFEEP 274
| |
|
| |
|
| |
| >ref|ZP_01233748.1| putative GTPase [Vibrio angustum S14]
| |
| gb|EAS66203.1| putative GTPase [Vibrio angustum S14]
| |
| Length = 317
| |
|
| |
| Score = 238 bits (608), Expect = 2e-061
| |
| Identities = 121/286 (42%), Positives = 182/286 (63%), Gaps = 12/286 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKN---KPRIMLLN 58
| |
| +IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NP+I+ KP + +LN
| |
| Sbjct: 4 SIQWFPGHMHKARKEIEEAMPKVDVIIEVLDARIPFSSENPLIKSFRNTNDGKPVVKVLN 63
| |
|
| |
| Query: 59 KADKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| K D AD +TQ W +H E QG++++++ + N +NQI+ +++ + +
| |
| Sbjct: 64 KRDLADPEMTQLWIDHLEKEQGVKAIAVTTENLNEVNQIMELCRKLAPHREEA------- 116
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| + IR +I+GIPNVGKST+IN LA + +A TG++P +T QQ + + + L DTPGILW
| |
| Sbjct: 117 GKKIRTMIMGIPNVGKSTIINALAGRTVAITGNQPAVTRQQQRINLDNGVLLSDTPGILW 176
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD-EIPEDIAE 236
| |
| PK E+ G RLA TGAIKD+ ++ DVA F + +L + YP+ +K RY LD E+PE E
| |
| Sbjct: 177 PKVENPHSGFRLAATGAIKDTAMDYIDVAFFTIEYLIKAYPDMIKARYNLDNELPESEIE 236
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| L + IG KRGCL GG ++ K + ++I ++R G ++ E P M
| |
| Sbjct: 237 LMEEIGRKRGCLKGGGRVDLHKASVILINELRNGTLGHITLEHPDM 282
| |
|
| |
|
| |
| >ref|YP_693544.1| GTPase family protein [Alcanivorax borkumensis SK2]
| |
| emb|CAL17272.1| GTPase family protein [Alcanivorax borkumensis SK2]
| |
| Length = 349
| |
|
| |
| Score = 238 bits (607), Expect = 3e-061
| |
| Identities = 120/283 (42%), Positives = 183/283 (64%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+I WFPGHM KA RE+ + L +D+V E+VDAR+P SS NP+IE +KP + LL+K+
| |
| Sbjct: 35 MSINWFPGHMNKAIREIRDILPKVDLVIEVVDARLPYSSANPVIEQFRADKPCLKLLSKS 94
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQG-IRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A+TQQW H E +R+L+I + + + +++ + ++ ++ DR +
| |
| Sbjct: 95 DLADPAITQQWLAHLEQDPTVRALAITTEKPEQIRKLLDTALKMAGKREDRATS------ 148
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| + ALI GIPNVGKSTLIN LA + IAK G+ P +T QQ + + L L+D+PGILWPK
| |
| Sbjct: 149 -VTALITGIPNVGKSTLINNLASRIIAKAGNEPAVTQRQQRIDLRNGLILIDSPGILWPK 207
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+ G RLA++GAIK + + DVA+F + + YPE +KER+ LD +P++ +
| |
| Sbjct: 208 IENPDSGYRLALSGAIKATAMQEDDVALFAAEYFMQAYPELMKERFKLDTLPDEGVPFLE 267
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG++RGC+ GG +++D+T ++I + R+ K G ++ E P M
| |
| Sbjct: 268 TIGKQRGCIGKGGHVDFDRTAALLINEYRSGKLGPITLETPAM 310
| |
|
| |
|
| |
| >ref|ZP_00885526.1| GTP-binding [Caldicellulosiruptor saccharolyticus DSM 8903]
| |
| gb|ABP67734.1| GTP-binding protein, HSR1-related [Caldicellulosiruptor
| |
| saccharolyticus DSM 8903]
| |
| Length = 282
| |
|
| |
| Score = 237 bits (604), Expect = 6e-061
| |
| Identities = 114/279 (40%), Positives = 182/279 (65%), Gaps = 1/279 (0%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M +QW+PGHM KA+RE+ E K +D+ L+DAR P+SSRN +E ++K+KP+I LLNKA
| |
| Sbjct: 1 MIVQWYPGHMQKAKREILELNKYVDLYLILLDARAPLSSRNEQLESLIKDKPKIFLLNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD Q+ ++FE+ R+L ++ + G + I ++ +L+++ + R KG + +
| |
| Sbjct: 61 DLADEKKNNQFLKYFESINQRALCVDCLKGTNVKNIFKIAENLLKDRIEEARQKG-RRKI 119
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR ++GIPNVGKSTLIN++ + AKTGD+PG+T S+QW+K+ E+LDTPGIL PK
| |
| Sbjct: 120 IRFGVLGIPNVGKSTLINKITNSSKAKTGDKPGVTKSKQWIKINDYFEMLDTPGILVPKL 179
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED++V ++L G+IKD + + + VA + +++ Y E L ++Y LD + E
| |
| Sbjct: 180 EDDMVAIKLCAIGSIKDELYDKELVAKKTIEIIKKDYCELLNKKYSLDFLNMSEDEYLIE 239
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| IG+KRGC++ G I+ K + + D+R K GR++ ++
| |
| Sbjct: 240 IGKKRGCVLKEGKIDTLKAANLFLEDLRKAKIGRITLDE 278
| |
|
| |
|
| |
| >ref|ZP_01450117.1| hypothetical protein OM2255_21518 [alpha proteobacterium HTCC2255]
| |
| gb|EAU49635.1| hypothetical protein OM2255_21518 [alpha proteobacterium HTCC2255]
| |
| Length = 337
| |
|
| |
| Score = 236 bits (601), Expect = 1e-060
| |
| Identities = 123/283 (43%), Positives = 175/283 (61%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M + WFPGHM K +EV E L +DI+ E++DARIP SS NP I I + P + +LNKA
| |
| Sbjct: 1 MAVHWFPGHMHKTLKEVKETLPSVDILIEVLDARIPYSSENPEIAKIRGDTPCLKILNKA 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T QW+ EN+ GI++++ + N V SK+I+ + K +
| |
| Sbjct: 61 DLADPIITAQWQASLENERGIQTMTTTTDN-------VGKSKQIIDKIRSVCAQKNASVK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| I A+IIGIPNVGKSTLIN LA++ IAKTG+ P +T + Q + +G + L DTPG+LWPK
| |
| Sbjct: 114 NINAMIIGIPNVGKSTLINILAERTIAKTGNEPAVTRNLQRINLGSGIVLYDTPGVLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| + G RLA +GA+KD+ + DV F +L + YPE LK R+ LDEIP+ E +
| |
| Sbjct: 174 LANPNTGYRLAASGAVKDTAMEYDDVGFFAADYLIKAYPELLKARFKLDEIPDTEIEFLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| +KRG +MSGG +N K EV++ ++ + K G+++ E P M
| |
| Sbjct: 234 MAAKKRGAVMSGGRVNLHKICEVLLNELMSGKIGQITLETPEM 276
| |
|
| |
|
| |
| >ref|ZP_01111221.1| GTP-binding protein [Alteromonas macleodii 'Deep ecotype']
| |
| gb|EAR04375.1| GTP-binding protein [Alteromonas macleodii 'Deep ecotype']
| |
| Length = 332
| |
|
| |
| Score = 236 bits (601), Expect = 1e-060
| |
| Identities = 122/283 (43%), Positives = 179/283 (63%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M +QWFPGHM KA +E+ E L +DI+ E++DARIP SS NP I I +KP I +LNK
| |
| Sbjct: 1 MALQWFPGHMHKALKEIKESLNQVDILIEVLDARIPYSSENPEIAKIRGDKPCIKILNKY 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T W+E E + G+++++ +S N Q++ + I K + P+
| |
| Sbjct: 61 DLADPELTALWQESLEKERGVKTITTSSDNPGNSKQLMQLIRSICSYKEGQ-------PK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| AI+A+I GIPNVGKSTLIN LA + IAKTG+ P +T SQQ + +G + L DTPG+LWPK
| |
| Sbjct: 114 AIKAMITGIPNVGKSTLINILADRIIAKTGNEPAVTKSQQRINLGSGIILFDTPGVLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+ RLA +GA+K++ + DV F +L + YPE +KER+ LDE+P E +
| |
| Sbjct: 174 LENPNSIYRLASSGAVKNTAMEYDDVGFFAADYLIKAYPEVMKERFKLDELPSTEIEFLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| A + RG + SGG +N K E++++++++ K GR++ E P M
| |
| Sbjct: 234 AAAKTRGAIASGGRVNLHKICEILLKELQSGKLGRVTLETPEM 276
| |
|
| |
|
| |
| >ref|YP_663190.1| GTP-binding [Pseudoalteromonas atlantica T6c]
| |
| gb|ABG42136.1| GTP-binding [Pseudoalteromonas atlantica T6c]
| |
| Length = 334
| |
|
| |
| Score = 236 bits (601), Expect = 1e-060
| |
| Identities = 122/283 (43%), Positives = 175/283 (61%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+I W+PGHM KA++E+ E L +D++ E++DARIP SS NP I I + P I +L+K+
| |
| Sbjct: 1 MSIHWYPGHMHKAQKEIKELLPQVDLLIEVLDARIPYSSENPAIAAIRGDTPCIKVLSKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD VT W+ H E + G+++ + + Q + QI+ +++L EK +
| |
| Sbjct: 61 DLADPDVTAMWQAHLEQERGVKTFTTTTEQPQKMKQIIDLCRKMLPEK-------DASIK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| I +I GIPNVGKSTLIN LA++ IAKTG+ P +T +QQ + +G + L DTPGILWPK
| |
| Sbjct: 114 TINTMICGIPNVGKSTLINILAERIIAKTGNEPAVTKAQQRINLGSGIILFDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+ RLA TGAIKD+ + DV F +L + YP+ LKERY L+ IP+ E +
| |
| Sbjct: 174 VENPQSSYRLATTGAIKDTAMEYDDVGFFAADYLIKAYPDLLKERYKLENIPDTEIEFLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| +RG L +GG +N K EV++ + R+ K GR+S E P M
| |
| Sbjct: 234 MAAAQRGALRAGGRVNLHKICEVLVNEFRSGKLGRISLETPDM 276
| |
|
| |
|
| |
| >ref|YP_794969.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
| |
| gb|ABJ63938.1| Predicted GTPase [Lactobacillus brevis ATCC 367]
| |
| Length = 286
| |
|
| |
| Score = 235 bits (600), Expect = 2e-060
| |
| Identities = 122/280 (43%), Positives = 177/280 (63%), Gaps = 7/280 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQWFPGHMAKA R++ E + L+DIV+ELVDARIP +SRNP + I KNKP +++L K D
| |
| Sbjct: 3 TIQWFPGHMAKAIRQMEENIHLVDIVFELVDARIPAASRNPEVTRIAKNKPHLIILTKKD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T W ++ Q +++I+S QI + IL +K +AKG+K R +
| |
| Sbjct: 63 LADPQQTAAWLAYYREQHQPAIAIDSRANVTPKQITKIAASILADKLAAEKAKGLKERPM 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RA+ +G+PNVGKSTL+N L ++ A+ GD PG+T QQW++ K LELLDTPGILWPKF+
| |
| Sbjct: 123 RAMTVGVPNVGKSTLLNHLVQRKAAQVGDTPGVTKGQQWLRSSKHLELLDTPGILWPKFK 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL--DEIPEDIAELFD 239
| |
| D+ +LA+TGAIK+ + DVA+F L F +++ + L +RY L ++ +L
| |
| Sbjct: 183 DQETAQKLALTGAIKEKLYAKDDVALFALNFFRQYHADALIDRYHLVTSDLELSDVDLLL 242
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| I EK G +Y++ +E +I D R +K G + ++
| |
| Sbjct: 243 KITEKVGM-----RDDYERASERLILDARRKKLGGFTLDR 277
| |
|
| |
|
| |
| >ref|ZP_01162826.1| putative GTPase [Photobacterium sp. SKA34]
| |
| gb|EAR53426.1| putative GTPase [Photobacterium sp. SKA34]
| |
| Length = 317
| |
|
| |
| Score = 235 bits (600), Expect = 2e-060
| |
| Identities = 119/286 (41%), Positives = 181/286 (63%), Gaps = 12/286 (4%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKN---KPRIMLLN 58
| |
| +IQWFPGHM KAR+E+ E + +D++ E++DARIP SS NP+I+ KP + +LN
| |
| Sbjct: 4 SIQWFPGHMHKARKEIEEAMPKVDVIIEVLDARIPFSSENPLIKSFRNTNDGKPVVKVLN 63
| |
|
| |
| Query: 59 KADKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| K D AD +TQ W +H E QG++++++ + N +NQI+ +++ + +
| |
| Sbjct: 64 KRDLADPEMTQLWIDHLEKEQGVKAIAVTTENLNEVNQIMDLCRKLAPHREEA------- 116
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| + IR +I+GIPNVGKST+IN LA + +A TG++P +T QQ + + + L DTPGILW
| |
| Sbjct: 117 GKKIRTMIMGIPNVGKSTIINALAGRTVAITGNQPAVTRQQQRINLDNGVLLSDTPGILW 176
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGL-DEIPEDIAE 236
| |
| PK E+ G RLA TGAIKD+ ++ DV F + +L + YP+ +K RY L D++PE E
| |
| Sbjct: 177 PKVENPHSGFRLAATGAIKDTAMDYIDVGFFTIEYLIKAYPDMIKARYNLDDDLPESEIE 236
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| L + IG KRGCL GG ++ K + ++I ++R G ++ E P M
| |
| Sbjct: 237 LMEEIGRKRGCLKGGGHVDLHKASVILINELRNGTLGNITLEHPDM 282
| |
|
| |
|
| |
| >ref|YP_268441.1| GTP-binding protein [Colwellia psychrerythraea 34H]
| |
| gb|AAZ27011.1| GTP-binding protein [Colwellia psychrerythraea 34H]
| |
| Length = 310
| |
|
| |
| Score = 234 bits (597), Expect = 4e-060
| |
| Identities = 118/281 (41%), Positives = 180/281 (64%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHM KA++E+ E L ID+V E+ DAR+P SS NPMI +I +KP I +LNK+
| |
| Sbjct: 1 MAINWFPGHMHKAQKEIKEILPQIDVVIEVCDARLPFSSENPMITEIRGDKPLIKILNKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD T+ W ++ E+Q ++++++ + +V ++++ K + + +
| |
| Sbjct: 61 DLADPESTKVWLDYLESQHNVKAIALTTEQPSVAKNLVNLIRKLVPNKDE-------EGK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| I A+I+GIPNVGKSTL+N L K AK G+ P +T QQ +++ + L L DTPG+LWPK
| |
| Sbjct: 114 QINAMIMGIPNVGKSTLLNTLVGKAKAKVGNEPAVTKGQQRIRLEEGLYLFDTPGMLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| +E G RLAV+GA+KD+ + D+A F +L ++YP+R+ ERY L E+P +L +
| |
| Sbjct: 174 IANENSGYRLAVSGAVKDTAFDHDDIAYFAADYLLKNYPKRIMERYKLSELPAHEEDLIE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| AIG KR C+ SGG ++ K + ++I +IR + G +SFE P
| |
| Sbjct: 234 AIGRKRSCIKSGGRVDLHKASVILINEIRDKTLGAISFELP 274
| |
|
| |
|
| |
| >ref|YP_193860.1| GTP binding protein [Lactobacillus acidophilus NCFM]
| |
| gb|AAV42829.1| GTP binding protein [Lactobacillus acidophilus NCFM]
| |
| Length = 284
| |
|
| |
| Score = 234 bits (597), Expect = 4e-060
| |
| Identities = 118/279 (42%), Positives = 181/279 (64%), Gaps = 2/279 (0%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQW+PGHM KAR ++ +KL LID++ E++DARIP SSRNPMIE+++ NKP I++LNKAD
| |
| Sbjct: 3 TIQWYPGHMNKARNQLEDKLNLIDVLVEVLDARIPESSRNPMIEELVGNKPHIIILNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD +T++W E F L+++S++ + +++ K+ +K ++ A+G I
| |
| Sbjct: 63 LADPILTKKWAEKFSGPDKYVLALDSLHNTNMQKLISLVKKAASDKTKKLEARGASNPTI 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R + GIPN GKST+INRL +N+A+ G++PG+T Q+W+K +++LDTPGILWPKF
| |
| Sbjct: 123 RIALAGIPNCGKSTIINRLVGRNVAEVGNKPGVTKGQRWLKTSANIQVLDTPGILWPKFS 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| D+ VG +LA GAIKDSI + DVA++ L L E+Y + L + L+ DI L DA
| |
| Sbjct: 183 DQTVGYKLAAFGAIKDSIFHADDVALYVLERLREYYLKDLIKFSKLNS--ADIENLSDAD 240
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| G +YD+ + +++ +R GR++ ++P
| |
| Sbjct: 241 ILLAMTEKYGMRDDYDRFSLFMLQRLRKGAIGRITLDRP 279
| |
|
| |
|
| |
| >ref|ZP_01142846.1| GTP-binding [Geobacter uraniumreducens Rf4]
| |
| gb|EAR35217.1| GTP-binding [Geobacter uraniumreducens Rf4]
| |
| Length = 277
| |
|
| |
| Score = 234 bits (597), Expect = 4e-060
| |
| Identities = 113/281 (40%), Positives = 178/281 (63%), Gaps = 8/281 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQW+PGHM KA +++E ++ ID++ E++D R+P SS N ++ + +KP I +LNK
| |
| Sbjct: 1 MTIQWYPGHMGKAHEQISELIRKIDVIIEVLDCRLPASSANHLLAKLRGDKPCIKVLNKN 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A+T+ W FE + G+R+L +++ + +NQ++ + ++ + G
| |
| Sbjct: 61 DLADPAITKAWVRTFERETGVRALPLSAKQHREVNQLIKLCRRLVPNR-------GKPEW 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +RA+++GIPNVGKSTLIN LA K +AK GD+P ITTS Q + + + L DTPG+LWP
| |
| Sbjct: 114 PVRAMVVGIPNVGKSTLINTLAGKCMAKVGDKPAITTSAQKIDLHNGITLCDTPGLLWPD 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| D++ RLA +GAI S I +V +F F+ + Y E L RY L ++P+ A++ +
| |
| Sbjct: 174 MSDQVASYRLATSGAIGASAIEYINVGLFAAEFMMQRYRELLSTRYKLTDVPDSAADVLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG + GCL +GG ++ + E +R++R K GR+SFE+P
| |
| Sbjct: 234 QIGRRLGCLAAGGGVDLQRAAEAFLRELRAGKLGRVSFEEP 274
| |
|
| |
|
| |
| >ref|ZP_01113895.1| GTP-binding protein [Reinekea sp. MED297]
| |
| gb|EAR10274.1| GTP-binding protein [Reinekea sp. MED297]
| |
| Length = 286
| |
|
| |
| Score = 233 bits (594), Expect = 9e-060
| |
| Identities = 112/279 (40%), Positives = 184/279 (65%), Gaps = 9/279 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHMAKARR+++E + ID+V E++DARIP+SS NP++ + ++KP + LL+K+D
| |
| Sbjct: 4 INWFPGHMAKARRQISEIIPKIDVVIEVLDARIPLSSMNPILTKVRRDKPVLRLLSKSDL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQG-IRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD VT++W+ H E + IR + + N + L ++ +E++ + G + +
| |
| Sbjct: 64 ADPEVTEKWQRHLEQERHIRVVPMVMSNRKQLAKVTDYCRELVPNR-------GTVGKPV 116
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R++++GIPNVGKSTLIN LA K IA+ GD P +T +QQ +++ ++ L+DTPGI+WP +
| |
| Sbjct: 117 RSVVVGIPNVGKSTLINGLAGKKIARVGDEPAVTRNQQKIQLAQDFTLMDTPGIMWPSPD 176
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| E+ G RLA +GAI+D+ + +D+A+F + +L + YPE L RY L E+ + + I
| |
| Sbjct: 177 SEVGGYRLAASGAIRDTAVEYEDIALFTVDYLAQRYPEALMARYKLSEVADTAMDTMAMI 236
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| KR C + G +++ + +EV+++D R+ GR+S E+P
| |
| Sbjct: 237 ARKRAC-VRGKEVDWHRVSEVVLKDFRSGALGRISLEEP 274
| |
|
| |
|
| |
| >ref|YP_959640.1| GTP-binding protein, HSR1-related [Marinobacter aquaeolei VT8]
| |
| gb|ABM19453.1| GTP-binding protein, HSR1-related [Marinobacter aquaeolei VT8]
| |
| Length = 307
| |
|
| |
| Score = 233 bits (594), Expect = 9e-060
| |
| Identities = 123/283 (43%), Positives = 177/283 (62%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHM KAR+E+ + + +D++ E+VDARIP SS NP++ + + P I +LNK
| |
| Sbjct: 1 MAINWFPGHMHKARKEIKKVMPQMDLIIEVVDARIPFSSENPLVPSLRGDTPLIKVLNKR 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T+QW E + G+R++++ Q I+ ++E + DR ++
| |
| Sbjct: 61 DLADPVITEQWLAWLERERGVRAVTLTHNQRQEALGILKLAEE-MTPGHDRQKS------ 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| A+R +I+GIPNVGKSTLIN LA + AKTG+ P +T +QQ +K+ + L DTPG LWPK
| |
| Sbjct: 114 ALRVMILGIPNVGKSTLINTLAGRPAAKTGNEPAVTRAQQAIKLPDNVLLYDTPGFLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| G RLAVTGAI+ ++++ +DVA+F +L HYPE + RYGLDE P D L D
| |
| Sbjct: 174 LSPVQCGYRLAVTGAIRSAVLDFEDVALFEADYLIAHYPELVVNRYGLDETPVDGLALMD 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AI KR L GG+ + K +EV++ ++R GR+S E P M
| |
| Sbjct: 234 AIAVKRRFLGRGGVPDLHKVSEVLLNELRAGTLGRISLETPDM 276
| |
|
| |
|
| |
| >ref|ZP_00754788.1| COG1161: Predicted GTPases [Vibrio cholerae O395]
| |
| ref|ZP_01479266.1| hypothetical protein VchoM_02001619 [Vibrio cholerae MO10]
| |
| ref|ZP_01485976.1| hypothetical protein VchoV5_02001423 [Vibrio cholerae V51]
| |
| Length = 302
| |
|
| |
| Score = 230 bits (587), Expect = 6e-059
| |
| Identities = 113/274 (41%), Positives = 180/274 (65%), Gaps = 8/274 (2%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQ 69
| |
| M KAR+E+ E + +D++ E++DARIP SS NP+I I KP + +LNK D AD +T+
| |
| Sbjct: 1 MHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHIRGEKPCVKVLNKRDLADPELTE 60
| |
|
| |
| Query: 70 QWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGI 128
| |
| W H E + G+++++I + N Q +++I+ +++ ++ + + IR +I+GI
| |
| Sbjct: 61 LWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEI-------GKNIRTMIMGI 113
| |
|
| |
| Query: 129 PNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLR 188
| |
| PNVGKST+IN LA + IA+TG++P +T QQ + + + L DTPGILWPK E+ G R
| |
| Sbjct: 114 PNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKVENPHSGFR 173
| |
|
| |
| Query: 189 LAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCL 248
| |
| LA TGA+KD+ + +VA + + +L +HYPERLKERY +DE+PE EL + IG KRG L
| |
| Sbjct: 174 LAATGAVKDTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPETDVELMEEIGRKRGAL 233
| |
|
| |
| Query: 249 MSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| +G ++ K +E+++ ++R G+++ E+P M
| |
| Sbjct: 234 RAGARVDLHKASEILLHELRQGVLGQITLERPEM 267
| |
|
| |
|
| |
| >ref|NP_903582.1| hypothetical protein CV3912 [Chromobacterium violaceum ATCC 12472]
| |
| gb|AAQ61573.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
| |
| 12472]
| |
| Length = 312
| |
|
| |
| Score = 229 bits (585), Expect = 1e-058
| |
| Identities = 125/283 (44%), Positives = 180/283 (63%), Gaps = 9/283 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM KAR++V+E+LK ID+V E++DAR+P SS NPM+ + K KPR+MLLNK
| |
| Sbjct: 1 MAIQWFPGHMNKARKDVSERLKDIDVVIEMLDARLPASSANPMLARMAKGKPRLMLLNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D AD AVT+QW + R+ G + PA + I + G++ +
| |
| Sbjct: 61 DLADPAVTEQWLAWY-----RAKKQTEALGMDAGERAPAQRLIAACRALAPNRGGLE-KP 114
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +R LI GIPNVGKSTLIN ++ + IAKTG+ PG+T ++Q + + + EL DTPG+LWPK
| |
| Sbjct: 115 LRVLICGIPNVGKSTLINSMSSRKIAKTGNMPGVTKNEQRIILADDFELYDTPGMLWPKI 174
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E E G LA +GA+ + ++ ++VA+ L++L HY L RY LDE D A+ + A
| |
| Sbjct: 175 EVEEGGYNLAASGAVGRNAMDEEEVALELLKYLLVHYRAELAARYKLDEEELDGAQDWQA 234
| |
|
| |
| Query: 241 ---IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG++RG ++SGG IN K E+++ D R + GR++ E+P
| |
| Sbjct: 235 LERIGKRRGAVLSGGRINMQKAAEIVLTDFRDGQTGRITLERP 277
| |
|
| |
|
| |
| >ref|NP_604100.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
| |
| 25586]
| |
| gb|AAL95399.1| GTP-binding protein [Fusobacterium nucleatum subsp. nucleatum ATCC
| |
| 25586]
| |
| Length = 289
| |
|
| |
| Score = 229 bits (585), Expect = 1e-058
| |
| Identities = 119/283 (42%), Positives = 178/283 (62%), Gaps = 6/283 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I W+PGHM K + + E LKLID+V E+VDARIP+SS+NP I + KNK RI++LNK+D
| |
| Sbjct: 6 INWYPGHMKKTKDLIEENLKLIDVVLEIVDARIPLSSKNPNIASLSKNKKRIIVLNKSDL 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRS--LSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| +WK++F+ Q + +++ G + ++ A + + +E+ +++ KG+K +
| |
| Sbjct: 66 VSKQELDKWKKYFKEQDFADEVVEMSAETGYNVKKLYEAIEFVSKERKEKLLKKGLKKVS 125
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| R +++GIPNVGKS LINR+ KN A G++PG T +QWV++ + +ELLDTPGILWPKF
| |
| Sbjct: 126 TRIIVLGIPNVGKSRLINRIVGKNSAAVGNKPGFTRGKQWVRIKEGIELLDTPGILWPKF 185
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLR-FLEEHYPERLKERYGLDEIPED---IAE 236
| |
| E + VG+ LA+TGAI+D I+ L+DVA LR LE+ E LKERY L E D +
| |
| Sbjct: 186 ESKTVGINLAITGAIRDEILPLEDVACSLLRKMLEQGRWESLKERYKLLEEDRDDKVLEN 245
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| + I + L GG +N + ++RD R K G+ ++
| |
| Sbjct: 246 ILSKIALRMAMLNKGGELNVLQAAYTLLRDYRVAKLGKFGLDE 288
| |
|
| |
|
| |
| >ref|ZP_01736168.1| GTP-binding protein [Marinobacter sp. ELB17]
| |
| gb|EBA01170.1| GTP-binding protein [Marinobacter sp. ELB17]
| |
| Length = 315
| |
|
| |
| Score = 229 bits (583), Expect = 2e-058
| |
| Identities = 119/283 (42%), Positives = 173/283 (61%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I WFPGHM KAR+E+ E + +D++ E+VDARIP SS NP++ + + P I +LNK
| |
| Sbjct: 1 MAINWFPGHMHKARKEIKEVMPQMDLIIEVVDARIPFSSENPLVPALRGDTPLIKVLNKR 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD VT QW+ E + G++++++ I+ +++ L DR ++
| |
| Sbjct: 61 DLADPDVTGQWQSWLERERGVKTITLTHNQRSEALDILNLAEQ-LTPNHDRQKS------ 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| A+R +I+GIPNVGKSTLIN LA + AKTG+ P +T +QQ +K+ + L DTPG LWPK
| |
| Sbjct: 114 ALRVMILGIPNVGKSTLINTLAGRPAAKTGNEPAVTRAQQAIKLPNNILLYDTPGFLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| G RLAVTGAI+ ++++ +DVA+F +L HYPE L RYGLD +P D D
| |
| Sbjct: 174 LSPAACGYRLAVTGAIRSAVLDFEDVALFAAEYLLAHYPEFLTSRYGLDPLPVDGLAAMD 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| AI +R GG+ + K +EV++ + R GR+S E P +
| |
| Sbjct: 234 AIAARRRFFGRGGIPDLHKVSEVLLNEFRAGTLGRISLETPRL 276
| |
|
| |
|
| |
| >ref|YP_356202.1| predicted GTPases [Pelobacter carbinolicus DSM 2380]
| |
| gb|ABA88032.1| predicted GTPases [Pelobacter carbinolicus DSM 2380]
| |
| Length = 280
| |
|
| |
| Score = 227 bits (578), Expect = 6e-058
| |
| Identities = 115/278 (41%), Positives = 179/278 (64%), Gaps = 9/278 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHM AR+++ E + ID+V E++DAR+PM+S NP++ ++ KP I +LNK D
| |
| Sbjct: 2 INWFPGHMHSARQQIAEAMPKIDLVIEVLDARLPMASSNPLLAEMRGVKPCIKVLNKNDL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQG--IRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| AD VT +W FE++G +++L+IN+ L ++V S+ ++ + G +
| |
| Sbjct: 62 ADPEVTGEWVRFFESRGKGMKALAINATRKAELTRLVRLSRSLVPHR-------GGPGKP 114
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +R +I+GIPNVGKSTLIN L + IAK GD+P IT S Q V + + L DTPG+L P
| |
| Sbjct: 115 LRIMIVGIPNVGKSTLINTLCGRKIAKVGDKPAITRSAQQVDLRNGILLFDTPGVLAPNL 174
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| ED+ + LA TGAI D+ ++ + +A F FL E YP++L ERY L E+P++ L +
| |
| Sbjct: 175 EDQRGAMCLAATGAIGDNAMDHERIAAFTGDFLLERYPQQLIERYRLKELPQNGELLIEQ 234
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| +G +RGCLM+GG+++ + E+++ D++ + GR+S E
| |
| Sbjct: 235 VGRRRGCLMAGGVVDRQRAAEIVLHDLQAGRLGRISME 272
| |
|
| |
|
| |
| >ref|ZP_01598445.1| GTP-binding [Marinomonas sp. MWYL1]
| |
| gb|EAV91039.1| GTP-binding [Marinomonas sp. MWYL1]
| |
| Length = 341
| |
|
| |
| Score = 226 bits (577), Expect = 8e-058
| |
| Identities = 122/283 (43%), Positives = 172/283 (60%), Gaps = 8/283 (2%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M++QW+PGHM KARRE+ E + +DIV E++DARIP SS+NPM+ + P + LLNK
| |
| Sbjct: 1 MSVQWYPGHMNKARREIEEVMTQVDIVIEVLDARIPDSSQNPMLNTLRGEVPVLRLLNKK 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFE-NQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A W EH+ N+ I + ++++ + +I +++ + G +
| |
| Sbjct: 61 DLADKARLDLWLEHWHGNESILAHPFSTLDKADVARISQWVSQMVPHR-------GSAEK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IRA+I GIPNVGKS+L+N L + +AK GD P +T SQQ +KV ++LDTPGILWPK
| |
| Sbjct: 114 PIRAMIAGIPNVGKSSLMNALLGRRVAKVGDEPAVTKSQQKLKVTNGFQILDTPGILWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| E+ RLAVTGA++D+ I+ +DVA+ GL+F Y E L RY L E+ D E+
| |
| Sbjct: 174 IENPDASYRLAVTGAVRDTAIDYEDVALAGLKFFIADYLESLTTRYKLKEVSLDPYEVLK 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG KRG L +GG ++ K EV + D+RT G E P M
| |
| Sbjct: 234 IIGSKRGALRAGGKVDMHKAAEVFLNDVRTGAIGPYVMETPDM 276
| |
|
| |
|
| |
| >ref|YP_619143.1| Putative GTP-binding protein [Lactobacillus delbrueckii subsp.
| |
| bulgaricus ATCC 11842]
| |
| ref|YP_813162.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
| |
| BAA-365]
| |
| emb|CAI98077.1| Putative GTP-binding protein [Lactobacillus delbrueckii subsp.
| |
| bulgaricus ATCC 11842]
| |
| gb|ABJ58724.1| Predicted GTPase [Lactobacillus delbrueckii subsp. bulgaricus ATCC
| |
| BAA-365]
| |
| Length = 285
| |
|
| |
| Score = 226 bits (575), Expect = 1e-057
| |
| Identities = 112/284 (39%), Positives = 180/284 (63%), Gaps = 12/284 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGHM KAR ++ EKL LID+V E++DARIP +SRNPMI +++ +KP +++LNK D
| |
| Sbjct: 4 IQWYPGHMNKARNQLEEKLNLIDVVIEVLDARIPSASRNPMISELVGDKPHLIILNKTDL 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T+ W++ + +++++ + + ++ K+ EK ++ +G IR
| |
| Sbjct: 64 ADPVMTKLWQKKLQGPRTLVMAMDAQHNTNMQALITLIKKAASEKVKKLEERGASNPIIR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| ++G+PN GKST+INRL +N+ TGDRPG+T Q W+K +++LDTPGILWPKFED
| |
| Sbjct: 124 VCLVGVPNCGKSTIINRLVGRNVTMTGDRPGVTKGQAWLKTPYGIQILDTPGILWPKFED 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKE-----RYGLDEIPEDIAEL 237
| |
| + VG +LA GAIKD+I + DVA+F +R L ++YP L + + L+ I + +L
| |
| Sbjct: 184 QEVGYKLAAFGAIKDTIFHADDVALFVIRQLRQYYPAYLAKFANCTKDKLENIGD--TDL 241
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPT 281
| |
| A+ + G +YD+ + +++ +R K GR+S + P+
| |
| Sbjct: 242 LLAMTQNNGMRE-----DYDRFSLFMLQRLRKGKLGRISLDWPS 280
| |
|
| |
|
| |
| >ref|ZP_01135512.1| putative tRNA modification protein [Pseudoalteromonas tunicata D2]
| |
| gb|EAR26908.1| putative tRNA modification protein [Pseudoalteromonas tunicata D2]
| |
| Length = 305
| |
|
| |
| Score = 223 bits (567), Expect = 1e-056
| |
| Identities = 112/274 (40%), Positives = 175/274 (63%), Gaps = 8/274 (2%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQ 69
| |
| M KAR E+ E + +D++ E++DARIP SS NPM+ + +KP I +LNKAD AD +T
| |
| Sbjct: 1 MNKARNEIKEVMPQMDVIIEVLDARIPYSSENPMVTALRADKPVIKILNKADLADPVMTS 60
| |
|
| |
| Query: 70 QWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGI 128
| |
| W +FE + G+++++ + +++I K+++ K + I+A+I+GI
| |
| Sbjct: 61 AWMSYFEQENGVKAIAFGNDKAAEVHKINELCKKLVPHKVG-------PDKQIKAMIMGI 113
| |
|
| |
| Query: 129 PNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLR 188
| |
| PNVGKSTLIN LA + +AKTG+ P +T +QQ +K+ + L DTPG+LWPK E+E G R
| |
| Sbjct: 114 PNVGKSTLINTLAGRIVAKTGNEPAVTKAQQRIKLEDGIMLYDTPGMLWPKVENENSGYR 173
| |
|
| |
| Query: 189 LAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCL 248
| |
| LA TGAI+D+ I +DVA + +L + YP+ L++RY +DE+PE + + G+KRGC+
| |
| Sbjct: 174 LAATGAIRDTAIEYEDVASYTAEYLLQSYPKLLQQRYKIDELPEQDWQFIELAGKKRGCI 233
| |
|
| |
| Query: 249 MSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| G I+ K +E++I ++R GR++ E P M
| |
| Sbjct: 234 RQGNQIDTHKMSEILINELRDGVIGRITMETPAM 267
| |
|
| |
|
| |
| >ref|YP_527028.1| GTP-binding protein [Saccharophagus degradans 2-40]
| |
| gb|ABD80816.1| GTP-binding [Saccharophagus degradans 2-40]
| |
| Length = 281
| |
|
| |
| Score = 221 bits (563), Expect = 3e-056
| |
| Identities = 112/281 (39%), Positives = 174/281 (61%), Gaps = 9/281 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M I W+PGHM KAR +V E + +D+V E++DAR+P SS NPMIE + +KP + +L+K+
| |
| Sbjct: 1 MLINWYPGHMNKARNKVKEIMPAVDVVIEVLDARLPASSTNPMIETLRGDKPYLKVLSKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHF-ENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD +T+ W+ F E + + SL+I + I +++L + G +
| |
| Sbjct: 61 DLADPTITKAWQAFFREQRNMDSLAITTDKVSIAKTIPDRIRKLLPNR-------GTSLK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| IRALI+GIPNVGKSTLIN LA K IA G+ P +T +QQ +++ L+DTPG+ WP
| |
| Sbjct: 114 PIRALIMGIPNVGKSTLINTLAGKKIAPVGNEPAVTKAQQKIRISDNFFLIDTPGMTWPG 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| ++E++ RLA +GAI+D+ + D+AVF + ++ + YPE +++RY DE+ E + +
| |
| Sbjct: 174 SKNEMINYRLAASGAIRDTALEYDDLAVFAMDYMLQRYPEAIRKRYQFDELCESATAMLE 233
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + KRGC GL + + E+ +R++R K GR S E+P
| |
| Sbjct: 234 ELAMKRGC-KKNGLPDLTRIGELFVRELRAGKLGRFSLEEP 273
| |
|
| |
|
| |
| >ref|NP_964961.1| hypothetical protein LJ1105 [Lactobacillus johnsonii NCC 533]
| |
| gb|AAS08927.1| hypothetical protein LJ_1105 [Lactobacillus johnsonii NCC 533]
| |
| Length = 279
| |
|
| |
| Score = 220 bits (561), Expect = 6e-056
| |
| Identities = 115/280 (41%), Positives = 178/280 (63%), Gaps = 8/280 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQW+PGHM KA+ ++ + L LID++ E++DAR+P+SSRNPMI + K KP I++LNKAD
| |
| Sbjct: 3 TIQWYPGHMNKAKNQLEDNLDLIDVLIEVLDARLPVSSRNPMIGQLTKKKPHIIVLNKAD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W +++++G +S+++ + + + K +EK D++ AKG I
| |
| Sbjct: 63 LADPIQTKKWTHYYQDEGNFVISMDAQHTTNMTSLFKIIKLAGKEKTDKLIAKGASNPMI 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R I GIPN GKST+INR+ +N A GD+PG+T Q W+K +++LDTPGILWPKF
| |
| Sbjct: 123 RVAIAGIPNCGKSTIINRMVGRNAAIVGDKPGVTRGQSWLKTKTNVQILDTPGILWPKFS 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKE--RYGLDEIPE-DIAELF 238
| |
| D+ VG +LA GAIK I + DVA+F + FL+++Y + L + R +E+ +L
| |
| Sbjct: 183 DQEVGYKLAACGAIKADIFHPDDVALFVIEFLKQNYRDDLVKFARISSEEMDSMSNPDLL 242
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| A+ K G +YDK + +++ +R K GR++F+
| |
| Sbjct: 243 LAMTNKYGM-----RDDYDKFSLFMLQRLRKGKLGRITFD 277
| |
|
| |
|
| |
| >ref|YP_814740.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
| |
| gb|ABJ60302.1| Predicted GTPase [Lactobacillus gasseri ATCC 33323]
| |
| Length = 279
| |
|
| |
| Score = 219 bits (558), Expect = 1e-055
| |
| Identities = 113/280 (40%), Positives = 180/280 (64%), Gaps = 8/280 (2%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQW+PGHM KA+ ++ + L LID++ E++DAR+P+SSRNPMI + K KP I++LNK+D
| |
| Sbjct: 3 TIQWYPGHMNKAKNQLEDNLDLIDVLIEVLDARLPVSSRNPMIGQLTKKKPHIIILNKSD 62
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++W +F+++G +S+++ + + + K ++K +++ AKG I
| |
| Sbjct: 63 LADPIQTKKWTRYFQDEGNFVISMDAQHNTNMTSLFKIIKLAGKKKTEKLIAKGASNPMI 122
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R I GIPN GKST+INR+ +N A GD+PG+T Q W+K +++LDTPGILWPKF
| |
| Sbjct: 123 RVAIAGIPNCGKSTIINRMVGRNAAIVGDKPGVTRGQSWLKTKTNVQILDTPGILWPKFS 182
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERL-KERYGLDEIPEDIA--ELF 238
| |
| D+ VG +LA GAIK + + DVA+F + FL+++Y + L K +E E+++ +L
| |
| Sbjct: 183 DQEVGYKLAACGAIKADVFHPDDVALFVIEFLKQNYKKDLTKFAQATNEELENMSNPDLL 242
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| A+ K G +YDK + +++ +R K GR++F+
| |
| Sbjct: 243 LAMTNKYGM-----RDDYDKFSLFMLQRLRKGKLGRITFD 277
| |
|
| |
|
| |
| >ref|YP_360259.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901]
| |
| gb|ABB14141.1| GTP-binding protein [Carboxydothermus hydrogenoformans Z-2901]
| |
| Length = 276
| |
|
| |
| Score = 218 bits (555), Expect = 3e-055
| |
| Identities = 110/277 (39%), Positives = 179/277 (64%), Gaps = 3/277 (1%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I W+PGHM K ++ + ++KL+D+V E+ DARIP+SS+NP IE+I KNKPRI+L NK D
| |
| Sbjct: 2 INWYPGHMFKTKKALLAQVKLVDVVLEIRDARIPLSSKNPDIEEICKNKPRIVLFNKKDL 61
| |
|
| |
| Query: 63 ADAAVTQQ-WKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AD T++ K+ +G+ + S GL ++ +++ + ++ KG++PR +
| |
| Sbjct: 62 ADVEKTEEILKKLPWPEGVYYCLVESKATGGLKEVWNIIEKVYGQYKEKWSGKGLRPRPL 121
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R +++GIPNVGKST+INRL K+++ KTG +PG+T QW+K+ +LEL+DTPG+LWPK
| |
| Sbjct: 122 RGMVVGIPNVGKSTVINRLLKRSV-KTGAKPGVTRGVQWIKLSDKLELMDTPGVLWPKLG 180
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAI 241
| |
| D VGL+L TG+I D ++ + +VA + L+ L + R+ L+ E++ E+++ I
| |
| Sbjct: 181 DMEVGLKLGATGSISDEVLPVIEVANWLLKILCTYRKPEFFNRFNLNG-SENLNEIYEKI 239
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| G +RG + G I+Y K VI+++ R G+ + +
| |
| Sbjct: 240 GRRRGLFLRGEEIDYQKVALVILKEFRQGLLGKYTLD 276
| |
|
| |
|
| |
| >ref|ZP_01168307.1| GTP-binding protein [Oceanospirillum sp. MED92]
| |
| gb|EAR59589.1| GTP-binding protein [Oceanospirillum sp. MED92]
| |
| Length = 288
| |
|
| |
| Score = 217 bits (553), Expect = 5e-055
| |
| Identities = 110/256 (42%), Positives = 163/256 (63%), Gaps = 8/256 (3%)
| |
|
| |
| Query: 24 IDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQQWKEHFEN-QGIRS 82
| |
| +D++ E++DAR+P SS NP+++ + K KP + LLNK+D AD TQ+W + F R+
| |
| Sbjct: 4 VDVIIEVLDARLPQSSENPLVDTLRKGKPALKLLNKSDLADDVRTQEWLDFFNGLPDTRA 63
| |
|
| |
| Query: 83 LSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAK 142
| |
| ++++ + +N+I K++ A+ R +RA+I+GIPNVGKSTLIN L
| |
| Sbjct: 64 MALDHTQKKLINRIAEICKQMAP-------ARSEAGRPVRAMIMGIPNVGKSTLINALLG 116
| |
|
| |
| Query: 143 KNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKDSIINL 202
| |
| + IAK G+ P +T SQ + L DTPGILWPK D G RLA +GAIKD+ I
| |
| Sbjct: 117 RKIAKVGNEPAVTKSQTRFTTKNGMALSDTPGILWPKIADVDSGYRLAASGAIKDTAIEH 176
| |
|
| |
| Query: 203 QDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMSGGLINYDKTTEV 262
| |
| +DVA+F F+ + YP+RL ER+ L EIPE E+ D IG +RGCL GG+++ +K + +
| |
| Sbjct: 177 EDVAIFAAGFMRDDYPQRLTERFKLKEIPELAEEVLDEIGRRRGCLRPGGIVDRNKASTL 236
| |
|
| |
| Query: 263 IIRDIRTEKFGRLSFE 278
| |
| ++ +IR+ K G+LSFE
| |
| Sbjct: 237 LLNEIRSGKLGKLSFE 252
| |
|
| |
|
| |
| >ref|YP_573403.1| GTP-binding [Chromohalobacter salexigens DSM 3043]
| |
| gb|ABE58704.1| GTP-binding [Chromohalobacter salexigens DSM 3043]
| |
| Length = 319
| |
|
| |
| Score = 216 bits (551), Expect = 8e-055
| |
| Identities = 119/303 (39%), Positives = 178/303 (58%), Gaps = 35/303 (11%)
| |
|
| |
| Query: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKAD 64
| |
| W+PGHM KARR++ E L ID+V E++DAR+P SS NPM+ ++ ++KP + +L++AD AD
| |
| Sbjct: 4 WYPGHMHKARRQIKEALPEIDVVLEVLDARLPYSSANPMLAELTEHKPVLKVLSRADLAD 63
| |
|
| |
| Query: 65 AAVTQQWKEHF-ENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRA 123
| |
| T++W +F E R+L++ + + L +I PA + E +RA R +R
| |
| Sbjct: 64 PEQTERWVAYFNERPDTRALAVTTTQARELKRI-PA---LCHELAGHVRAD----RDVRV 115
| |
|
| |
| Query: 124 LIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDE 183
| |
| +++GIPNVGKSTLIN LA K IAKTG+ P +T QQ +++ + L+DTPG+LWPK ED+
| |
| Sbjct: 116 MVMGIPNVGKSTLINGLAGKKIAKTGNEPAVTKRQQKIRLDGRVALIDTPGVLWPKIEDQ 175
| |
|
| |
| Query: 184 LVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE----------- 232
| |
| RLA +GAI+D+ + DVA+ L + YPE LK RY L +P
| |
| Sbjct: 176 ASAYRLAASGAIRDTAMEYSDVAIVAAAELAKRYPEALKARYKLKTLPSYAPNPDAGSVE 235
| |
|
| |
| Query: 233 ---------------DIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSF 277
| |
| D + +AI KRG L +GG+++ + EV++ ++R K GRL+
| |
| Sbjct: 236 ADGPPHRDLLALAGFDGQAIVEAIASKRGGLRAGGIVDMHRGAEVLLHELRDGKLGRLTL 295
| |
|
| |
| Query: 278 EQP 280
| |
| E P
| |
| Sbjct: 296 ETP 298
| |
|
| |
|
| |
| >emb|CAK98620.1| putative gtp binding protein [Spiroplasma citri]
| |
| Length = 296
| |
|
| |
| Score = 216 bits (550), Expect = 1e-054
| |
| Identities = 110/288 (38%), Positives = 179/288 (62%), Gaps = 15/288 (5%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHMAKA +++ E+ KLID+V E+VD+RIP SS NP+++++ KP++++LNK D
| |
| Sbjct: 5 IHWFPGHMAKAIKQIDEQSKLIDLVIEIVDSRIPFSSSNPLVDNLRGLKPKLIILNKKDL 64
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD V + W E++++Q I L ++S +G I+ +L K +R + +G+K ++
| |
| Sbjct: 65 ADPVVIKAWLEYYQSQQIAVLPLDSKHGNITKLIIEKIYHVLSGKIERDQNRGIKSPKLK 124
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| ++IGIPNVGKST IN L K+N + G++PG+T QQW+K+ +++L+DTPGILWPK D
| |
| Sbjct: 125 VMVIGIPNVGKSTFINALIKRNSTRVGNKPGVTKGQQWLKLNHQIDLVDTPGILWPKIND 184
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| V + LA T +IK+ I+ +++ + ++++ +HY L ++Y L ++ FD
| |
| Sbjct: 185 PQVAINLAFTRSIKEDILPKEEICLAAIKWMYKHYFSLLAKQYHL-----TASDNFDVTD 239
| |
|
| |
| Query: 243 EKR--GCLMSGGLINYDKTTEVIIRDIRTE--------KFGRLSFEQP 280
| |
| E++ L+ + K E + DI T+ KFG +SFE P
| |
| Sbjct: 240 EQKLFELLLIMQQNRFHKVNEDNVNDIVTDFLNNLWNNKFGLISFEFP 287
| |
|
| |
|
| |
| >ref|ZP_01223623.1| putative GTPase YlqF [marine gamma proteobacterium HTCC2207]
| |
| gb|EAS48182.1| putative GTPase YlqF [marine gamma proteobacterium HTCC2207]
| |
| Length = 303
| |
|
| |
| Score = 215 bits (548), Expect = 2e-054
| |
| Identities = 107/274 (39%), Positives = 170/274 (62%), Gaps = 10/274 (3%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQ 69
| |
| M KA E+ E L L+++V E++DARIP SS NP I+D++ KP I +LNK D AD +TQ
| |
| Sbjct: 1 MRKASNEMIESLPLVNLVIEVLDARIPFSSSNPFIQDLVTEKPSIKILNKCDLADPEITQ 60
| |
|
| |
| Query: 70 QWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGI 128
| |
| W++++E Q ++++++ + Q++ ++ +K + R ++ GI
| |
| Sbjct: 61 VWQDYYEQQDNTKTMALDLQHFDPSKQVIDLINKLCPQK---------EGRNTLVMVTGI 111
| |
|
| |
| Query: 129 PNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLR 188
| |
| PNVGKS+LIN LA ++IAKTG+ P +T QQ + + + LLDTPGILWPK E+ R
| |
| Sbjct: 112 PNVGKSSLINSLAGRHIAKTGNEPAVTKGQQKINLRNGIMLLDTPGILWPKIENPNGSYR 171
| |
|
| |
| Query: 189 LAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCL 248
| |
| LA TGAIK++ ++ +DVA F FL E YPE L++R+ + +P EL + IG +RGCL
| |
| Sbjct: 172 LATTGAIKNTAVSYEDVAFFAADFLLEKYPELLQKRFKFETLPHSEIELLEIIGAQRGCL 231
| |
|
| |
| Query: 249 MSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| GG ++ ++ + + + ++R G ++FE P +
| |
| Sbjct: 232 RGGGQVDLERVSTIFVNELRAGTLGNITFETPAV 265
| |
|
| |
|
| |
| >ref|YP_545313.1| GTP-binding [Methylobacillus flagellatus KT]
| |
| gb|ABE49472.1| GTP-binding [Methylobacillus flagellatus KT]
| |
| Length = 305
| |
|
| |
| Score = 213 bits (543), Expect = 7e-054
| |
| Identities = 114/283 (40%), Positives = 171/283 (60%), Gaps = 10/283 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDIL--KNKPRIMLLN 58
| |
| M IQWFPGHM AR++ E ++ D+V E++DAR+P +S NPMIE++ + +P + +LN
| |
| Sbjct: 1 MAIQWFPGHMTSARKKAEETMEFTDVVIEVLDARVPEASHNPMIEELRLHRQRPSLKILN 60
| |
|
| |
| Query: 59 KADKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| KAD AD AVTQ W HF Q GI++++++ +I + + R +K
| |
| Sbjct: 61 KADLADPAVTQAWLNHFNRQDGIKAVALSCKKPGDAKKIPDLCRSLAPH-----RGSHLK 115
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| P +R +I+GIPNVGKSTL+N L + IAK GD P +T SQQ ++ +L + DTPG++W
| |
| Sbjct: 116 P--LRMMIMGIPNVGKSTLMNALLNRRIAKVGDEPAVTKSQQRFELSPQLTITDTPGMMW 173
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAEL 237
| |
| PK + + G LA + AI + + ++VA F L E YP L+ RY +D D +L
| |
| Sbjct: 174 PKIKYDSDGYMLAASHAIGRNAVIDEEVAEFLAGILLERYPALLQSRYKIDVSNMDAIDL 233
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| +AIG++RG L+ GG ++ +KT + D R+ GR+S E P
| |
| Sbjct: 234 LEAIGKRRGYLLKGGALDMEKTAMAFLVDYRSGTLGRISLETP 276
| |
|
| |
|
| |
| >ref|YP_207475.1| hypothetical protein NGO0316 [Neisseria gonorrhoeae FA 1090]
| |
| gb|AAW89063.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
| |
| Length = 313
| |
|
| |
| Score = 212 bits (539), Expect = 2e-053
| |
| Identities = 114/284 (40%), Positives = 173/284 (60%), Gaps = 11/284 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM KAR+ + E+ K +D+V E++DAR+P SS NP++ + K KP++ +LNK
| |
| Sbjct: 1 MAIQWFPGHMNKARKAIAERAKSVDMVIEMLDARMPASSENPLLAQLSKGKPKLKILNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD T+ W +H+ ++ R+++++S +I A + ++ + +G+ +
| |
| Sbjct: 61 DLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACRAMIPHR------QGID-K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN + K AKTG+ PGIT ++Q + + + L DTPG+LWPK
| |
| Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADDFWLYDTPGMLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE---DIAE 236
| |
| E G LA GA+ + ++ ++VA+ L +L HY L+ERY D+ P D
| |
| Sbjct: 174 IIVEESGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQERYQADKDPSSHWDDNS 233
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + I +KRG ++SGG +NY K E I+ D R K GR++ E P
| |
| Sbjct: 234 WLEWIAKKRGAVLSGGRVNYQKAAENILTDFREGKIGRITLETP 277
| |
|
| |
|
| |
| >ref|NP_866913.1| predicted GTPase [Rhodopirellula baltica SH 1]
| |
| emb|CAD74454.1| predicted GTPase [Rhodopirellula baltica SH 1]
| |
| Length = 326
| |
|
| |
| Score = 211 bits (537), Expect = 4e-053
| |
| Identities = 109/281 (38%), Positives = 170/281 (60%), Gaps = 10/281 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M+IQWFPGHM KAR E+ L +D+V E++DARIP SS NPM+ DI +K + +L K+
| |
| Sbjct: 1 MSIQWFPGHMHKARLEIQAALPKVDVVMEIIDARIPYSSENPMLADIRGDKACLKVLTKS 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQG-IRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD T++W + + R+ S+ + + + ++ A + + K R
| |
| Sbjct: 61 DLADPHRTEEWLDALNSSSSTRARSVTTDDVPTIRRLKSALIGMCPHR---------KGR 111
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +I A+++GIPNVGKST+IN LA + +AKTG+ P +T QQ V +G + L DTPG+LWPK
| |
| Sbjct: 112 SINAMVMGIPNVGKSTIINFLAGRKVAKTGNTPAVTQHQQRVDIGDGVILWDTPGMLWPK 171
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| + G RLA+ G+IKD+ ++ DV F R+ E YP+RL R+ L+ + + + +
| |
| Sbjct: 172 VHNVSSGYRLALIGSIKDTAMDYTDVGFFAARYFMEQYPDRLASRFDLESVADTEMAVIE 231
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| IG +RGCL ++ ++ + ++I++ RT GRL+ E P
| |
| Sbjct: 232 DIGRRRGCLGRNNRVDLERASRILIQEYRTGGLGRLTLETP 272
| |
|
| |
|
| |
| >ref|YP_522652.1| GTP-binding [Rhodoferax ferrireducens T118]
| |
| gb|ABD69121.1| GTP-binding [Rhodoferax ferrireducens DSM 15236]
| |
| Length = 316
| |
|
| |
| Score = 211 bits (536), Expect = 5e-053
| |
| Identities = 116/282 (41%), Positives = 163/282 (57%), Gaps = 9/282 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM + + E++K ID+V EL+DAR+P SS NPM+ ++ KP + +LNK
| |
| Sbjct: 1 MAIQWFPGHMHLTHKAIQERIKNIDVVIELLDARLPGSSANPMLAELTAGKPALKVLNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A T W H+ Q G R++ +++ + +K +++E F ++G +
| |
| Sbjct: 61 DLADPARTALWLAHYNAQPGTRAIGLDA-------SVTAPAKALIKECFALAPSRGGMVK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN L K KTGD GIT +Q + + + L DTPG+LWP+
| |
| Sbjct: 114 PMRVLICGIPNVGKSTLINTLTGKRATKTGDEAGITKLEQRISLADDFYLYDTPGMLWPR 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE-DIAELF 238
| |
| G LA +GAI + N ++VA+ L +L+ HY L RY LD + EL
| |
| Sbjct: 174 IIVAKSGYNLAASGAIGRNAFNEEEVALELLAYLKVHYAPLLAARYKLDVVDSLQDEELL 233
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| +AIG KRG L SG +N K E++I D R GR++ E P
| |
| Sbjct: 234 EAIGRKRGALQSGKGVNLQKAGEIVIYDFRAAALGRITLETP 275
| |
|
| |
|
| |
| >ref|YP_974781.1| hypothetical protein NMC0692 [Neisseria meningitidis FAM18]
| |
| emb|CAM09983.1| hypothetical protein [Neisseria meningitidis FAM18]
| |
| Length = 313
| |
|
| |
| Score = 210 bits (534), Expect = 8e-053
| |
| Identities = 114/284 (40%), Positives = 173/284 (60%), Gaps = 11/284 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM KA++ + E+ K +D+V E++DAR+P SS NP++ + K KP++ +LNK
| |
| Sbjct: 1 MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLLAQLSKGKPKLKILNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD T+ W +H+ ++ R+++++S +I A + ++ + +G+ +
| |
| Sbjct: 61 DLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACRAMIPHR------QGID-K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN + K AKTG+ PGIT ++Q + + + L DTPG+LWPK
| |
| Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADDFWLYDTPGMLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE---DIAE 236
| |
| E G LA GA+ + ++ ++VA+ L +L HY L+ERY D+ P D
| |
| Sbjct: 174 IIVEEGGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQERYQADKDPSSHWDENV 233
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + I +KRG ++SGG INY K E I+ D R K GR++ E P
| |
| Sbjct: 234 WLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLETP 277
| |
|
| |
|
| |
| >ref|YP_285002.1| GTP-binding [Dechloromonas aromatica RCB]
| |
| gb|AAZ46532.1| GTP-binding [Dechloromonas aromatica RCB]
| |
| Length = 307
| |
|
| |
| Score = 209 bits (533), Expect = 1e-052
| |
| Identities = 113/287 (39%), Positives = 174/287 (60%), Gaps = 12/287 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIED--ILKNKPRIMLLN 58
| |
| M+IQWFPGHM +AR++ E L + D+V E++DAR+P +S NPMI + + + +P + LLN
| |
| Sbjct: 1 MSIQWFPGHMTQARKKAGETLAVADVVVEVLDARLPQASSNPMIHELRVFRQRPCLKLLN 60
| |
|
| |
| Query: 59 KADKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| KAD AD T+ W F+ Q +++++I+ + +I ++++ + D VK
| |
| Sbjct: 61 KADLADPEATKAWLAFFDAQPNVKAVAISCKKASDVARIPGLAQKLAPHRND-----AVK 115
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| P +R +I+GIPNVGKSTL+N L KK +A GD+P +T SQQ + + L L DTPG+LW
| |
| Sbjct: 116 P--LRLMIMGIPNVGKSTLMNALVKKKVAAVGDQPAVTKSQQRIDISNRLTLYDTPGMLW 173
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAEL 237
| |
| PK + + GL LA + A+ + ++V + FL EHY LK RYG D +
| |
| Sbjct: 174 PKIDHPIDGLMLAASHAVGVNAYIDEEVGTWLAEFLLEHYSALLKARYGFATEGMDAVGV 233
| |
|
| |
| Query: 238 FDAIGEKRGCLMS--GGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| +AIG+KRGC++ GG I+ ++ ++I D R+ GR+S E P +
| |
| Sbjct: 234 IEAIGKKRGCVIKGRGGEIDMERAAAILILDYRSGALGRISLETPEL 280
| |
|
| |
|
| |
| >ref|ZP_01074079.1| putative GTPase YlqF [Marinomonas sp. MED121]
| |
| gb|EAQ67080.1| putative GTPase YlqF [Marinomonas sp. MED121]
| |
| Length = 317
| |
|
| |
| Score = 209 bits (531), Expect = 2e-052
| |
| Identities = 114/274 (41%), Positives = 163/274 (59%), Gaps = 8/274 (2%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQ 69
| |
| M KARRE+ + + +DIV E++DARIP SS+NPM+ + + P + LLNK D AD Q
| |
| Sbjct: 1 MNKARREIEDVMTQVDIVIEVLDARIPDSSQNPMLSQLRGDVPVLRLLNKKDLADETRIQ 60
| |
|
| |
| Query: 70 QWKEHF-ENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGI 128
| |
| W H+ E + I + ++++ Q L + +++ + G + IRA+I GI
| |
| Sbjct: 61 TWLTHWQEAESITAKPFSTLDKQDLASVKQWVAKLVPHR-------GTAEKPIRAMIAGI 113
| |
|
| |
| Query: 129 PNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLR 188
| |
| PNVGKS+L+N L + +AK GD P +T +QQ +KV LLDTPGILWPK E+ R
| |
| Sbjct: 114 PNVGKSSLMNALLGRRVAKVGDEPAVTKAQQKLKVSPGFVLLDTPGILWPKIENPKASYR 173
| |
|
| |
| Query: 189 LAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCL 248
| |
| LAVTGA++D+ I+ QDVA+ GL F HYP+ + RY + E+ IGEKRG L
| |
| Sbjct: 174 LAVTGAVRDTAIDYQDVALVGLDFFIGHYPDFITTRYKFKKALGTADEVLSTIGEKRGAL 233
| |
|
| |
| Query: 249 MSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| +GG+I+ K EV + D+R+ G+ E P M
| |
| Sbjct: 234 RAGGVIDMHKAAEVFLHDVRSGAIGQYVMETPDM 267
| |
|
| |
|
| |
| >ref|ZP_01582789.1| GTP-binding [Delftia acidovorans SPH-1]
| |
| gb|EAV72412.1| GTP-binding [Delftia acidovorans SPH-1]
| |
| Length = 317
| |
|
| |
| Score = 208 bits (529), Expect = 3e-052
| |
| Identities = 115/286 (40%), Positives = 174/286 (60%), Gaps = 13/286 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM R+ +TE++K ID+V E++DAR+P SS NP+++++ +KPR+ +LNK
| |
| Sbjct: 1 MAIQWFPGHMNLTRKVITERVKEIDVVIEVLDARLPGSSSNPLLQELTGHKPRLQVLNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQG-IRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D ADAA T W + + Q R++++++ +++ A K + + G +
| |
| Sbjct: 61 DLADAARTPLWLDWYNAQSDTRAIALDASEPAPTRRLIEACKLLAPNR-------GGMAK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN ++ K AKTGD GIT +Q + + + L DTPG+LWP+
| |
| Sbjct: 114 PMRVLICGIPNVGKSTLINSMSGKRQAKTGDEAGITKLEQRIVLADDFYLWDTPGMLWPR 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIA---- 235
| |
| E G LA +GA+ + + + VA+ L +L+++Y + L+ RY L E IA
| |
| Sbjct: 174 IIVEQSGYNLAASGAVGRNAYDEELVALELLGYLQKNYADLLEARYKLGLDNERIAALHD 233
| |
|
| |
| Query: 236 -ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| EL DAIG +RG +MSGG +N K E+++ D R GR++ E P
| |
| Sbjct: 234 DELLDAIGRRRGAMMSGGRVNLQKAAELVLTDFRGAILGRITLETP 279
| |
|
| |
|
| |
| >ref|NP_273781.1| hypothetical protein NMB0739 [Neisseria meningitidis MC58]
| |
| gb|AAF41152.1| conserved hypothetical protein [Neisseria meningitidis MC58]
| |
| Length = 505
| |
|
| |
| Score = 207 bits (528), Expect = 4e-052
| |
| Identities = 114/284 (40%), Positives = 172/284 (60%), Gaps = 11/284 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM KA++ + E+ K +D+V E++DAR+P SS NP++ + K KP++ +LNK
| |
| Sbjct: 1 MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLLAQLSKGKPKLKILNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD T+ W EH+ ++ +++++S +I A + ++ + +G+ +
| |
| Sbjct: 61 DLADPERTKIWLEHYNSRPDTCAIALDSSETGAHGKITQACRAMIPHR------QGID-K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN + K AKTG+ PGIT ++Q + + + L DTPG+LWPK
| |
| Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADDFWLYDTPGMLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE---DIAE 236
| |
| E G LA GA+ + ++ ++VA+ L +L HY L+ERY D+ P D
| |
| Sbjct: 174 IIVEEGGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQERYQADKDPSSHWDENV 233
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + I +KRG ++SGG INY K E I+ D R K GR++ E P
| |
| Sbjct: 234 WLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLETP 277
| |
|
| |
|
| |
| >ref|NP_283729.1| hypothetical protein NMA0950 [Neisseria meningitidis Z2491]
| |
| emb|CAM08175.1| hypothetical protein NMA0950 [Neisseria meningitidis Z2491]
| |
| Length = 313
| |
|
| |
| Score = 207 bits (526), Expect = 7e-052
| |
| Identities = 113/284 (39%), Positives = 172/284 (60%), Gaps = 11/284 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM KA++ + E+ K +D+V E++DAR+P SS NP++ + K KP++ +LNK
| |
| Sbjct: 1 MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLLAQLSKGKPKLKILNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD T+ W EH+ ++ +++++S +I A + ++ + +G+ +
| |
| Sbjct: 61 DLADPERTKIWLEHYNSRPDTCAIALDSSETGAHGKITQACRAMIPHR------QGID-K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN + K AKTG+ PGIT ++Q + + + L DTPG+LWPK
| |
| Sbjct: 114 PLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADDFWLYDTPGMLWPK 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE---DIAE 236
| |
| E G LA G++ + ++ ++VA+ L +L HY L+ERY D+ P D
| |
| Sbjct: 174 IIVEESGYNLAAGGSVGRNALDEEEVALELLDYLRRHYLPMLQERYQADKDPSSHWDENV 233
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + I +KRG ++SGG INY K E I+ D R K GR++ E P
| |
| Sbjct: 234 WLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLETP 277
| |
|
| |
|
| |
| >ref|YP_315878.1| GTPase [Thiobacillus denitrificans ATCC 25259]
| |
| gb|AAZ98073.1| GTPase [Thiobacillus denitrificans ATCC 25259]
| |
| Length = 304
| |
|
| |
| Score = 206 bits (523), Expect = 1e-051
| |
| Identities = 112/285 (39%), Positives = 168/285 (58%), Gaps = 12/285 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDIL--KNKPRIMLLN 58
| |
| M IQWFPGHM AR++ E + ID+V E++DAR+P + NPMI ++ + +P + +LN
| |
| Sbjct: 1 MVIQWFPGHMTTARKKAAETMAQIDVVVEVLDARLPEAGCNPMIHELRAHRQRPCLKVLN 60
| |
|
| |
| Query: 59 KADKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| K D AD AVT+ W +H+ Q G+ +++I++ + A L +K R K
| |
| Sbjct: 61 KVDLADPAVTRAWLDHYNRQPGVMAVAISAKKAADV-----AKLSALAQKLAPHRDDAFK 115
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| P +R +I+GIPNVGKSTL+N K+ +A GD P +T SQQ + + L L+DTPG+ W
| |
| Sbjct: 116 P--LRLMIMGIPNVGKSTLMNTWVKRRVAAVGDEPAVTKSQQRINLSPRLILVDTPGMTW 173
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAEL 237
| |
| PK E + G LA + AI + + ++VAVF L E YP L+ RYG D D +
| |
| Sbjct: 174 PKIEHDADGFMLAASHAIGRNAVIDEEVAVFLAAILLERYPALLRARYGFDVEGLDATGV 233
| |
|
| |
| Query: 238 FDAIGEKRGCLMS--GGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| +A+ +KRGCL+ GG ++ +K +++ D R+ GR+S E P
| |
| Sbjct: 234 VEAVAKKRGCLLKGRGGELDLEKAAMILLTDYRSGALGRISLETP 278
| |
|
| |
|
| |
| >gb|AAP58940.1| putative GTPase [Spiroplasma kunkelii]
| |
| Length = 296
| |
|
| |
| Score = 206 bits (523), Expect = 1e-051
| |
| Identities = 106/288 (36%), Positives = 178/288 (61%), Gaps = 15/288 (5%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHMAKA +++ E+ KLID++ E+VD+RIP SS NP+++++ KP++++LNK D
| |
| Sbjct: 5 IHWFPGHMAKAIKQIDEQSKLIDLIIEIVDSRIPFSSSNPLVDNLRGLKPKLIILNKKDL 64
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD + W +++++Q I L ++S +G I+ +L K +R + +G+K ++
| |
| Sbjct: 65 ADPVAIKAWFKYYQSQQIAVLPLDSKHGNITKLIIEKIYFVLAGKIERNQNRGIKSPKLK 124
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| ++IGIPNVGKST IN L K+N + G++PG+T QQW+K+ +++L+DTPGILWPK D
| |
| Sbjct: 125 VMVIGIPNVGKSTFINALIKRNSTRVGNKPGVTKGQQWLKLNHQIDLVDTPGILWPKIND 184
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| V + LA +IK+ I+ +++ + ++++ ++Y L ++Y L +P D FD
| |
| Sbjct: 185 PQVAINLAFIRSIKEDILPKEEICLAAIKWMHKYYFSLLVKQYHL--LPSD---NFDVTD 239
| |
|
| |
| Query: 243 EKR--GCLMSGGLINYDKTTEVIIRDIRTE--------KFGRLSFEQP 280
| |
| E++ L+ + K E + +I T+ KFG +SFE P
| |
| Sbjct: 240 EQKLFELLLVMQKNRFHKVDEDNVNNIVTDFLNNLWNNKFGLMSFEFP 287
| |
|
| |
|
| |
| >ref|ZP_01519590.1| GTP-binding [Comamonas testosteroni KF-1]
| |
| gb|EAV15867.1| GTP-binding [Comamonas testosteroni KF-1]
| |
| Length = 315
| |
|
| |
| Score = 202 bits (514), Expect = 2e-050
| |
| Identities = 112/286 (39%), Positives = 170/286 (59%), Gaps = 13/286 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM R+ +TE++K ID+V E++DAR+P SS NP+++++ +KPR+ +LNK
| |
| Sbjct: 1 MAIQWFPGHMHLTRQAITERVKEIDVVIEVLDARLPGSSANPLLQEMTGHKPRLKILNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMR-AKGVKPR 119
| |
| D AD T+ W + + Q + GL+ PA + L E+ + A+G +
| |
| Sbjct: 61 DMADPVQTKAWMDWYNAQ-------SETRAIGLDASEPAPTKRLIEQCKLLAPARGGLAK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI G+PNVGKSTLIN ++ K AKTG+ G+T +Q + + + L DTPG+LWP+
| |
| Sbjct: 114 PMRVLICGVPNVGKSTLINSMSGKTQAKTGNEAGVTKLEQRIVLADDFYLWDTPGMLWPR 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIA---- 235
| |
| E G LA +GA+ + + VA+ L +L+++Y L+ RY L ++IA
| |
| Sbjct: 174 IIVEKSGYNLAASGAVGRNAYDEDLVALELLLYLQKNYAPMLEARYKLGISAQEIAALHD 233
| |
|
| |
| Query: 236 -ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| EL IG+KRG +MSGG +N K E+++ D R GR++ E P
| |
| Sbjct: 234 DELLTLIGKKRGAVMSGGRVNLQKAAELVLTDFRDVSIGRITLETP 279
| |
|
| |
|
| |
| >ref|YP_986746.1| GTP-binding protein, HSR1-related [Acidovorax sp. JS42]
| |
| gb|ABM42670.1| GTP-binding protein, HSR1-related [Acidovorax sp. JS42]
| |
| Length = 319
| |
|
| |
| Score = 199 bits (505), Expect = 2e-049
| |
| Identities = 108/286 (37%), Positives = 171/286 (59%), Gaps = 13/286 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM R+ + E++K ID+V EL+DAR+P SS NP++ ++ +KP + +LNK
| |
| Sbjct: 1 MAIQWFPGHMHLTRKAIGERIKDIDVVIELLDARLPGSSSNPLLAELTGHKPALKVLNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A T W + + G ++++++ + +++ A +++ + +G+ +
| |
| Sbjct: 61 DVADPARTPAWLAWYNARPGTSAIALDASDAAPARRLIDACRQLAPNR------RGLS-K 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN L+ K AKTGD G+T +Q + + + L DTPG+LWP+
| |
| Sbjct: 114 PMRVLICGIPNVGKSTLINTLSAKREAKTGDEAGVTKQEQRIVLDDDFYLWDTPGMLWPR 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIA---- 235
| |
| G +LA +GA+ + + ++VA+ L +L++HY L RY L IA
| |
| Sbjct: 174 ITVPESGYKLAASGAVGRNAYDEEEVALELLAYLKQHYAPLLDARYKLGLDAAAIAAKHD 233
| |
|
| |
| Query: 236 -ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| EL + I KRG +MSGG +N K E+++ D+R+ GR++ E P
| |
| Sbjct: 234 DELLELIARKRGAVMSGGRLNLQKAAEIVLTDLRSAALGRVTLETP 279
| |
|
| |
|
| |
| >ref|YP_981548.1| GTP-binding protein, HSR1-related [Polaromonas naphthalenivorans
| |
| CJ2]
| |
| gb|ABM36627.1| GTP-binding protein, HSR1-related [Polaromonas naphthalenivorans
| |
| CJ2]
| |
| Length = 319
| |
|
| |
| Score = 198 bits (504), Expect = 2e-049
| |
| Identities = 114/282 (40%), Positives = 161/282 (57%), Gaps = 9/282 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM ++ + E++K ID+V EL+DAR+P SS NPM+ ++ KP + +LNK
| |
| Sbjct: 1 MAIQWFPGHMHLTKKAIAERIKEIDVVIELLDARLPGSSANPMLAELTGAKPALKVLNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A T W EH+ +Q G R++ +++ ++ A + R VKP
| |
| Sbjct: 61 DLADPARTALWLEHYNSQPGTRAIGLDASMSTPAKALIDACHALAPT-----RGSMVKP- 114
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN L K KTGD GIT +Q + + L DTPG+LWP+
| |
| Sbjct: 115 -MRVLICGIPNVGKSTLINTLTGKRATKTGDEAGITKVEQRLVLADGFYLWDTPGMLWPR 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAE-LF 238
| |
| G LA +GAI + ++VA+ L +L +YP+ L RY L+ P E +
| |
| Sbjct: 174 IIVAKSGYNLAASGAIGRNAFEEEEVALELLDYLIPNYPQALAARYKLELTPGITDEQVL 233
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + IG KRG ++S G IN K E++I + R GR++ E P
| |
| Sbjct: 234 EEIGRKRGAVLSKGRINLQKAAEIVIYEFRAATLGRITLETP 275
| |
|
| |
|
| |
| >ref|YP_997517.1| GTP-binding protein, HSR1-related [Verminephrobacter eiseniae
| |
| EF01-2]
| |
| gb|ABM58499.1| GTP-binding protein, HSR1-related [Verminephrobacter eiseniae
| |
| EF01-2]
| |
| Length = 329
| |
|
| |
| Score = 197 bits (500), Expect = 7e-049
| |
| Identities = 111/287 (38%), Positives = 164/287 (57%), Gaps = 15/287 (5%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM R+ +TE++ ID V E++DAR+P SS NP++ ++ KPR+ +LNK
| |
| Sbjct: 7 MAIQWFPGHMHLTRKAITERIGDIDAVIEVLDARLPGSSANPLLAELTGRKPRLKVLNKQ 66
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD T W ++ Q G ++++++ + Q++ + + G +
| |
| Sbjct: 67 DLADPERTALWLAWYQAQDGTSAVALDASGPAPVRQLIADCHRLAPHR-------GGMAK 119
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI G+PNVGKSTLINRL+ K AKTGD G+T +Q + + + L DTPG+LWP+
| |
| Sbjct: 120 PMRVLICGVPNVGKSTLINRLSHKRQAKTGDEAGVTRQEQRITLADDFYLWDTPGMLWPR 179
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI----- 234
| |
| G LA +GAI + + + VA+ LR L+ HY L+ RY L +P D
| |
| Sbjct: 180 IIVPESGDHLAASGAIGRNAYDEELVALQLLRRLQRHYAPLLEARYRLG-LPADALASLH 238
| |
|
| |
| Query: 235 -AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| EL AIG KRG + GG +N KT E+++ D R+ GR++ E P
| |
| Sbjct: 239 DEELLQAIGRKRGAMQDGGQVNRQKTAEIVLTDFRSASLGRITLETP 285
| |
|
| |
|
| |
| >ref|YP_160566.1| GTP-binding protein [Azoarcus sp. EbN1]
| |
| emb|CAI09665.1| GTP-binding protein [Azoarcus sp. EbN1]
| |
| Length = 304
| |
|
| |
| Score = 197 bits (500), Expect = 7e-049
| |
| Identities = 108/288 (37%), Positives = 169/288 (58%), Gaps = 17/288 (5%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIML--LN 58
| |
| M+IQWFPGHM AR++ E + L D+V E++DARIP +S NPMI ++ +++ R+ L LN
| |
| Sbjct: 1 MSIQWFPGHMTSARKKAAETMALTDVVIEVLDARIPEASSNPMIHELRRHRQRVCLKVLN 60
| |
|
| |
| Query: 59 KADKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| KAD AD T+ W + F +Q G+++++++ + ++ + + + D G K
| |
| Sbjct: 61 KADLADPVATRAWLDFFNSQEGVKAVALSCKKPGDVARVPGLCQGLAPHRND-----GTK 115
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| +R +I+GIPNVGKSTL+N L K+ +AK GD P +T SQQ +G + + DTPG++W
| |
| Sbjct: 116 --LLRIMIMGIPNVGKSTLMNALLKRRVAKVGDEPAVTKSQQTFDLGSHMTITDTPGLMW 173
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAEL 237
| |
| PK + G LA + AI + + ++VA F L E YP L RYG+ PE + L
| |
| Sbjct: 174 PKIAHDSDGFMLAASHAIGRNAVIDEEVATFLGDLLLERYPALLAARYGI--APERLEAL 231
| |
|
| |
| Query: 238 -----FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + I +RGC + GG + +K +++ + D R+ GR+S E P
| |
| Sbjct: 232 DGVGVIETIAARRGCRLKGGAPDLEKASQIFLNDYRSGVLGRISLETP 279
| |
|
| |
|
| |
| >gb|AAV68373.1| putative GTPase [Herminiimonas arsenicoxydans]
| |
| Length = 316
| |
|
| |
| Score = 196 bits (498), Expect = 1e-048
| |
| Identities = 103/283 (36%), Positives = 166/283 (58%), Gaps = 10/283 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDI--LKNKPRIMLLN 58
| |
| M+IQW+PGHM AR++ E ++ +D++ E++DAR+P +S NPMIE++ + +P + +LN
| |
| Sbjct: 1 MSIQWYPGHMNAARKKAAEAMEKVDMIIEVLDARVPQASCNPMIEELRTFRQRPCLKILN 60
| |
|
| |
| Query: 59 KADKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| K+D AD A TQQW + + Q + +++++ + +I S +I R +K
| |
| Sbjct: 61 KSDLADPAATQQWLDFYNKQKNVHAVALSCKKPSDVAKIPALSMKIAPH-----RGTALK 115
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| P +R +I+GIPNVGKSTL+N L KK +AK GD P +T QQ + +G + L DTPG++W
| |
| Sbjct: 116 P--LRIMIMGIPNVGKSTLMNALLKKRVAKVGDEPAVTKMQQRLYLGNNIVLTDTPGMMW 173
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAEL 237
| |
| PK GL LA + AI + + ++VA F + YP + RYG+ D +
| |
| Sbjct: 174 PKIAYPSDGLMLAASHAIGSNALIEEEVATFLADIILARYPALVAARYGMKTEGIDGVSV 233
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + + +RG + GG ++ +K + ++D RT GR+S E P
| |
| Sbjct: 234 IEGVAVRRGLRIKGGELDLEKAAHIFLQDYRTGLLGRISLETP 276
| |
|
| |
|
| |
| >ref|YP_970622.1| GTP-binding protein [Acidovorax avenae subsp. citrulli AAC00-1]
| |
| gb|ABM32848.1| GTP-binding protein [Acidovorax avenae subsp. citrulli AAC00-1]
| |
| Length = 322
| |
|
| |
| Score = 196 bits (497), Expect = 2e-048
| |
| Identities = 108/286 (37%), Positives = 166/286 (58%), Gaps = 13/286 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM R+ + E++K ID+V EL+DAR+P SS NP++ ++ ++P + +LNK
| |
| Sbjct: 1 MAIQWFPGHMHSTRKAIGERIKDIDVVIELLDARLPGSSANPLLAELTGHRPTLKVLNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D ADA T W + + + R++ +++ + +++ A +++ ++ G +
| |
| Sbjct: 61 DVADAGRTPAWLDWYNARPDTRAIGLDASDTAPARRLIEACRQLAPQR-------GGMAK 113
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN L K AKTGD GIT +Q + + + L DTPG+LWP+
| |
| Sbjct: 114 PMRVLICGIPNVGKSTLINTLTGKTQAKTGDEAGITKLEQRIVLDDDFYLWDTPGMLWPR 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| G +LA +GA+ + + ++VA+ L +L+ HY L RY L IA L D
| |
| Sbjct: 174 ITVPESGYKLAASGAVGRNAYDEEEVALELLAYLQRHYAPLLDARYRLGLDAAAIAALHD 233
| |
|
| |
| Query: 240 -----AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I KRG +MSGG +N K E+++ D R+ GR++ E P
| |
| Sbjct: 234 DELLALIARKRGAVMSGGRVNLQKAAELVMTDFRSAILGRITLETP 279
| |
|
| |
|
| |
| >ref|YP_550203.1| GTP-binding [Polaromonas sp. JS666]
| |
| gb|ABE45305.1| GTP-binding [Polaromonas sp. JS666]
| |
| Length = 330
| |
|
| |
| Score = 194 bits (492), Expect = 6e-048
| |
| Identities = 110/283 (38%), Positives = 161/283 (56%), Gaps = 11/283 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQWFPGHM ++ + +++K ID+V EL+DAR+P SS NPM+ ++ KP + +LNK
| |
| Sbjct: 1 MAIQWFPGHMHLTKKAIQDRIKEIDVVIELLDARLPGSSANPMLAELTSAKPALKVLNKQ 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFEN-QGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D AD A T W H+ + +++++++ +++ A + R VKP
| |
| Sbjct: 61 DLADPARTALWLAHYNSLPATQAIALDASETTPARRLIDACHALAPT-----RGSMVKP- 114
| |
|
| |
| Query: 120 AIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK 179
| |
| +R LI GIPNVGKSTLIN L K KTGD GIT +Q + + L DTPG+LWP+
| |
| Sbjct: 115 -MRVLICGIPNVGKSTLINTLTGKRATKTGDEAGITKLEQRIVLADGFYLYDTPGMLWPR 173
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIA--EL 237
| |
| G LA +GAI + N ++VA+ L +L YP L RY + E+P I +L
| |
| Sbjct: 174 IIVAKSGYNLAASGAIGRNAFNEEEVALELLDYLIRDYPGLLTARYKV-EVPPGITDEQL 232
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + IG KRG ++S G +N K E++I + R GR++ E P
| |
| Sbjct: 233 LEEIGRKRGAVLSKGRVNLQKAAEIVIHEFRASTLGRITLETP 275
| |
|
| |
|
| |
| >ref|YP_429831.1| GTP-binding [Moorella thermoacetica ATCC 39073]
| |
| gb|ABC19288.1| GTP-binding [Moorella thermoacetica ATCC 39073]
| |
| Length = 270
| |
|
| |
| Score = 192 bits (487), Expect = 2e-047
| |
| Identities = 96/266 (36%), Positives = 155/266 (58%), Gaps = 1/266 (0%)
| |
|
| |
| Query: 15 REVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQQWKEH 74
| |
| + + + LK++D V E+ DAR+P+SSR P +E ++ + R+++L +AD AD A T W E
| |
| Sbjct: 6 QSLRQYLKVVDAVLEVADARLPVSSRYPDLEKLIGFRARVVVLTRADLADPAATACWLEK 65
| |
|
| |
| Query: 75 FENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKS 134
| |
| G R++++N+ G G + K I + K + +G+ +R + +GIPNVGKS
| |
| Sbjct: 66 LRAGGTRAVAMNARTGSGDRLLYQYLKAIAKAKREARARRGLGEAPLRVMALGIPNVGKS 125
| |
|
| |
| Query: 135 TLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGA 194
| |
| +++NRLA + A+TG+RPGIT QW+++ LELLDTPG+LWP++ + L L G
| |
| Sbjct: 126 SVLNRLAGRGAARTGNRPGITRGPQWIRIKDNLELLDTPGVLWPRWREPRTALWLGALGC 185
| |
|
| |
| Query: 195 IKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMSGGLI 254
| |
| + + + +A FL P L RYG+ E D ++ AIG RG L+ GG++
| |
| Sbjct: 186 APEESVPVVGIACLVGEFLLREAPGTLAARYGIQE-QGDATDILAAIGRARGFLLPGGVV 244
| |
|
| |
| Query: 255 NYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + +KT ++ D R + GR + E+P
| |
| Sbjct: 245 DQEKTARALVNDFREGRLGRFTLERP 270
| |
|
| |
|
| |
| >ref|NP_926812.1| hypothetical protein glr3866 [Gloeobacter violaceus PCC 7421]
| |
| dbj|BAC91807.1| glr3866 [Gloeobacter violaceus PCC 7421]
| |
| Length = 296
| |
|
| |
| Score = 189 bits (480), Expect = 1e-046
| |
| Identities = 96/278 (34%), Positives = 157/278 (56%), Gaps = 6/278 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKARR++ E+LK +D+V E++DARI SSR+ I+ + +PR+++LN+AD
| |
| Sbjct: 9 IQWYPGHIAKARRQLAEQLKQVDLVLEVLDARIAHSSRHDEIQKLAGERPRLVVLNRADM 68
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| + + W + F +G + N+ NG G+ ++ A+++ R +G++PRA+R
| |
| Sbjct: 69 IPQGMLRSWLKWFAARGEAAYPTNAQNGDGVRAVLKAAQQGAVAVNQRRAGRGMRPRAVR 128
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +IG PNVGKS LINRL K ++ +PG+T + +WV++ ++LLD+PGIL P+ D
| |
| Sbjct: 129 VAVIGFPNVGKSALINRLVGKRAVESAAKPGVTRALRWVRIADVIDLLDSPGILPPRLND 188
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + +LA+ I + VA L P RL ER+G D + E + +
| |
| Sbjct: 189 QRAAAKLAICDDIGQAAYTTSRVATLAAELLTPLVPRRLAERFGADPLAVTAEEWLEQVA 248
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + G N D+ E ++ D R + G ++ E P
| |
| Sbjct: 249 RHK---YHG---NLDRAAEALLGDFRRGQLGAIALEAP 280
| |
|
| |
|
| |
| >ref|YP_053780.1| predicted GTPase [Mesoplasma florum L1]
| |
| gb|AAT75896.1| predicted GTPase [Mesoplasma florum L1]
| |
| Length = 315
| |
|
| |
| Score = 189 bits (479), Expect = 2e-046
| |
| Identities = 99/281 (35%), Positives = 163/281 (58%), Gaps = 6/281 (2%)
| |
|
| |
| Query: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKAD 64
| |
| WFPGHM K + + EK+ ++D+V E++DAR P SSRN ILKNKP + +L+KAD AD
| |
| Sbjct: 7 WFPGHMNKTLKNIEEKIPVVDLVIEILDARAPYSSRNLTFSKILKNKPILYVLSKADIAD 66
| |
|
| |
| Query: 65 AAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRAL 124
| |
| +T++W E +E + + ++ + ++ + +EK ++ +AKG+ I L
| |
| Sbjct: 67 PNITKEWVEFYEKKNNTVMVLDDKQKNIVKPLIDLINKATKEKQEKDKAKGMVNSLINVL 126
| |
|
| |
| Query: 125 IIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDEL 184
| |
| +IGIPNVGKST INRL K K G++PG+T Q + + + + LLDTPG+L K E+E
| |
| Sbjct: 127 VIGIPNVGKSTFINRLIKNKSVKAGNKPGLTRGIQLIHLSQFISLLDTPGVLPAKLENET 186
| |
|
| |
| Query: 185 VGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD---EIPEDIAE---LF 238
| |
| V + +IK+ + + VA +++L HY ++ Y + + P I + +F
| |
| Sbjct: 187 VATNICAINSIKEDVYPKERVAGKLMQYLFNHYEGLIENHYKISPRLQRPIQITDTFIIF 246
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| + I + R M+ L++YD+ + +RDI +F ++SFE+
| |
| Sbjct: 247 EMIAKVRKWYMNDDLLDYDRVIDAFMRDIIANEFNKVSFER 287
| |
|
| |
|
| |
| >ref|YP_475354.1| GTPase family protein [Synechococcus sp. JA-3-3Ab]
| |
| gb|ABD00091.1| GTPase family protein [Synechococcus sp. JA-3-3Ab]
| |
| Length = 289
| |
|
| |
| Score = 185 bits (469), Expect = 3e-045
| |
| Identities = 104/283 (36%), Positives = 166/283 (58%), Gaps = 13/283 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA ++ E+L+L+D+ E+VDARIP++SR+P ++ L KPR++ LN+AD
| |
| Sbjct: 6 IQWYPGHVAKAIGQLREQLRLVDVAIEVVDARIPLASRHPELDKWLGEKPRLLALNRADS 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| A + W+EHF QGI N +G+G+ ++ A ++ Q +R + G++PRA+R
| |
| Sbjct: 66 IAARDLKAWQEHFSQQGIPVYPTNGQSGEGVPRLKQAILQMGQAVNERRQRWGMRPRAVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+++G PNVGKS L+NRL + ++ RPG+T QWV++G EL+LLD+PGIL P D
| |
| Sbjct: 126 AVVVGFPNVGKSALLNRLLGRRAVESAARPGVTRQLQWVRLGGELDLLDSPGILPPSLPD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER---LKERYGL-DEIPEDIAELF 238
| |
| + LA+ I + + + VA + + L + P+ L++RYG D IP +
| |
| Sbjct: 186 QQAASLLAICDDIGAAAYDPEQVAAYFVDQLLQVQPQAQALLQQRYGWPDPIPPGSVAVQ 245
| |
|
| |
| Query: 239 DAIGEK-RGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| D + RG + ++ I+ D R G L+ + P
| |
| Sbjct: 246 DLAERRYRG--------DAERAARQILNDYRKGWLGPLALQIP 280
| |
|
| |
|
| |
| >ref|NP_001055624.1| Os05g0430400 [Oryza sativa (japonica cultivar-group)]
| |
| gb|AAV59426.1| putative GTP-binding protein [Oryza sativa (japonica
| |
| cultivar-group)]
| |
| dbj|BAF17538.1| Os05g0430400 [Oryza sativa (japonica cultivar-group)]
| |
| Length = 371
| |
|
| |
| Score = 184 bits (468), Expect = 4e-045
| |
| Identities = 103/283 (36%), Positives = 161/283 (56%), Gaps = 13/283 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| +QW+PGH+AK +E+ E+LKL+D+V E+ DARIP+++ +P ++ L N+ RI+++N+ D
| |
| Sbjct: 95 VQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLATSHPKMDAWLGNRKRIIVMNREDM 154
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W +F NQG + + N G G ++ +K + + R KG+ PRA+R
| |
| Sbjct: 155 VSNEDRNAWASYFANQGTKVVYSNGQLGMGTMKLGRMAKSLASTVNTKRREKGLLPRAVR 214
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A I+G PNVGKS+LINRL K+ + RPG+T +WV+ G +LELLD+PGIL + D
| |
| Sbjct: 215 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGSDLELLDSPGILPMRISD 274
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEH---YPERLKERYGLDEIPEDIAELFD 239
| |
| + ++LA+ I + + DVA ++ L H PE + RY LD + D ++F
| |
| Sbjct: 275 QTAAIKLAICDDIGERSYDFADVAAILVQLLVRHPAVGPEAFRRRYRLD-MDSDCGKMFV 333
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEV--IIRDIRTEKFGRLSFEQP 280
| |
| +S L N D + I+ D R KFG ++ E+P
| |
| Sbjct: 334 T-------KLSVHLFNGDASQAAFRILSDYRKGKFGCVALERP 369
| |
|
| |
|
| |
| >ref|YP_810592.1| Predicted GTPase [Oenococcus oeni PSU-1]
| |
| gb|ABJ56927.1| Predicted GTPase [Oenococcus oeni PSU-1]
| |
| Length = 282
| |
|
| |
| Score = 184 bits (468), Expect = 4e-045
| |
| Identities = 98/278 (35%), Positives = 162/278 (58%), Gaps = 11/278 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAK RE+ E++KL+D E+VDAR P +++NP I +++ KP ++LNK D
| |
| Sbjct: 5 IQWFPGHMAKTIREIGEQMKLVDFSLEIVDARAPQTTQNPQIMEMIAVKPVFLVLNKIDL 64
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD ++ +++ L+ ++ G + +++ F +K ++
| |
| Sbjct: 65 ADPRQVTKFINKNKDKFSGILTTDAKMGVLSKDFL---RQLKNNSFFADLSKNNTAANLK 121
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL++G PNVGKST IN LA KNIA+T ++PG+T W++ L LDTPG+LWPKFED
| |
| Sbjct: 122 ALVVGTPNVGKSTFINHLAGKNIARTANKPGVTHFLYWIRTRYNLVFLDTPGLLWPKFED 181
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED--IAELFDA 240
| |
| + + ++ + G IKD+++ D+A++ + FL+++YP + RY + P D IA L
| |
| Sbjct: 182 QEIATKIGILGGIKDNLLASDDLALWLISFLQKNYPTAIATRYKISHFPLDNPIAALMSI 241
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| + G +++ ++ +I D R+ KFG +S +
| |
| Sbjct: 242 TSQ------LGLRQDFESASQRLINDFRSGKFGLISLD 273
| |
|
| |
|
| |
| >ref|ZP_01544319.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
| |
| gb|EAV39449.1| GTP-binding protein [Oenococcus oeni ATCC BAA-1163]
| |
| Length = 293
| |
|
| |
| Score = 182 bits (463), Expect = 1e-044
| |
| Identities = 100/282 (35%), Positives = 164/282 (58%), Gaps = 19/282 (6%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQWFPGHMAK RE+ E++KL+D E+VDAR P +++NP I +++ KP ++LNK D
| |
| Sbjct: 16 IQWFPGHMAKTIREIGEQMKLVDFSLEIVDARAPQTTQNPQIMEMIAVKPVFLVLNKIDL 75
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRM----RAKGVKP 118
| |
| AD ++ +++ L+ ++ G SK+ L++ + +K
| |
| Sbjct: 76 ADPRQVTKFINKNKDKFSGILTTDAKMGV-------LSKDFLRQLKNNSVFADLSKNNTA 128
| |
|
| |
| Query: 119 RAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWP 178
| |
| ++AL++G PNVGKST IN LA KNIA+T ++PG+T W++ L LDTPG+LWP
| |
| Sbjct: 129 ANLKALVVGTPNVGKSTFINHLAGKNIARTANKPGVTHFLYWIRTRYNLVFLDTPGLLWP 188
| |
|
| |
| Query: 179 KFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED--IAE 236
| |
| KFED+ + ++ + G IKD+++ D+A++ + FL+++YP + RY + P D IA
| |
| Sbjct: 189 KFEDQEIATKIGILGGIKDNLLASDDLALWLISFLQKNYPTAIATRYKISHFPLDNPIAA 248
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| L + G +++ ++ +I D R+ KFG +S +
| |
| Sbjct: 249 LMSITSQ------LGLRQDFESASQRLINDFRSGKFGLISLD 284
| |
|
| |
|
| |
| >ref|YP_424514.1| GTPase family protein [Mycoplasma capricolum subsp. capricolum ATCC
| |
| 27343]
| |
| gb|ABC01164.1| GTPase family protein [Mycoplasma capricolum subsp. capricolum ATCC
| |
| 27343]
| |
| Length = 316
| |
|
| |
| Score = 182 bits (462), Expect = 2e-044
| |
| Identities = 89/282 (31%), Positives = 173/282 (61%), Gaps = 7/282 (2%)
| |
|
| |
| Query: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKAD 64
| |
| WFPGHM K +++ +++++D+V E++D+R P SS+N + +LK+KP + + +KAD AD
| |
| Sbjct: 7 WFPGHMNKTLKDIEARIEIVDVVVEVIDSRAPYSSKNATFKKLLKDKPIVYIFSKADIAD 66
| |
|
| |
| Query: 65 AAVTQQWKEHF-ENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRA 123
| |
| + VTQQW +++ +N+ + + + + + +N+++ E+ +K ++ +AKG+K I A
| |
| Sbjct: 67 SKVTQQWVDYYIKNENSKVIVLYNRHTDVVNELINVINELTIKKREKDKAKGIKNTLINA 126
| |
|
| |
| Query: 124 LIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDE 183
| |
| L+IGIPNVGKST INR+ K K G++PG+T Q + + + LLDTPG+L K E E
| |
| Sbjct: 127 LVIGIPNVGKSTFINRVIKGKNVKVGNKPGVTRGIQLIHLNPFINLLDTPGVLPSKLESE 186
| |
|
| |
| Query: 184 LVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE------DIAEL 237
| |
| V + + +IKD++ + VA + ++ +Y + +++ Y ++ + D ++
| |
| Sbjct: 187 TVAVNICAINSIKDNVFPKERVAAKLMSYVYNNYDDIIEKYYKINLRLQKPISVIDSYKI 246
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| F+ IG ++ ++ +++ ++ ++D+ K G++SFE+
| |
| Sbjct: 247 FETIGIEKKWYITEDILDMERILSSFLKDLDKGKLGKISFEK 288
| |
|
| |
|
| |
| >ref|NP_975415.1| Conserved hypothetical GTP-binding protein [Mycoplasma mycoides
| |
| subsp. mycoides SC str. PG1]
| |
| emb|CAE77057.1| Conserved hypothetical GTP-binding protein [Mycoplasma mycoides
| |
| subsp. mycoides SC str. PG1]
| |
| Length = 316
| |
|
| |
| Score = 182 bits (462), Expect = 2e-044
| |
| Identities = 89/282 (31%), Positives = 173/282 (61%), Gaps = 7/282 (2%)
| |
|
| |
| Query: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKAD 64
| |
| WFPGHM K +++ +++++D+V E++D+R P SS+N + +LK+KP + + +KAD AD
| |
| Sbjct: 7 WFPGHMNKTLKDIEARIEIVDVVVEVIDSRAPYSSKNATFKKLLKDKPIVYIFSKADIAD 66
| |
|
| |
| Query: 65 AAVTQQWKEHF-ENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRA 123
| |
| + VTQQW +++ +N+ + + + + + +N+++ E+ +K ++ +AKG+K I A
| |
| Sbjct: 67 SKVTQQWVDYYIKNENSKVIVLYNRHTDIVNELINVINELTIKKREKDKAKGIKNTLINA 126
| |
|
| |
| Query: 124 LIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDE 183
| |
| L+IGIPNVGKST INR+ K K G++PG+T Q + + + LLDTPG+L K E E
| |
| Sbjct: 127 LVIGIPNVGKSTFINRVIKGKNVKVGNKPGVTRGIQLIHLNPFINLLDTPGVLPSKLESE 186
| |
|
| |
| Query: 184 LVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPE------DIAEL 237
| |
| V + + +IKD++ + VA + ++ +Y + +++ Y ++ + D ++
| |
| Sbjct: 187 TVAVNICAINSIKDNVFPKERVAAKLMSYIYNNYDDIIEKYYKINLRLQKPISVIDSYKI 246
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| F+ IG ++ ++ +++ ++ ++D+ K G++SFE+
| |
| Sbjct: 247 FETIGIEKKWYVTEDILDMERILSSFLKDLDKGKLGKISFEK 288
| |
|
| |
|
| |
| >ref|YP_933624.1| probable GTPase [Azoarcus sp. BH72]
| |
| emb|CAL94737.1| probable GTPase [Azoarcus sp. BH72]
| |
| Length = 291
| |
|
| |
| Score = 181 bits (458), Expect = 5e-044
| |
| Identities = 99/274 (36%), Positives = 158/274 (57%), Gaps = 10/274 (3%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDI--LKNKPRIMLLNKADKADAAV 67
| |
| M AR++ E L ID+V E+ DAR+P +S NPMI ++ +N+P + LLNK D AD A
| |
| Sbjct: 1 MNSARKKAAEMLAAIDVVIEVTDARLPEASSNPMIGELRRFRNRPCLKLLNKVDLADPAA 60
| |
|
| |
| Query: 68 TQQWKEHFENQ-GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALII 126
| |
| T+ W + + Q +++++I++ + +I + + + D G KP +R +I+
| |
| Sbjct: 61 TKAWMDFYNRQPNVKAVAISAKKPADVARIPALCRMLAPHRDD-----GTKP--LRMMIM 113
| |
|
| |
| Query: 127 GIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVG 186
| |
| GIPNVGKST++N L K+ +A GD P +T Q + +G + L DTPG++WPK E + G
| |
| Sbjct: 114 GIPNVGKSTIMNALLKRKVAAVGDEPAVTKQLQTLDLGPGMTLTDTPGLMWPKIEHDADG 173
| |
|
| |
| Query: 187 LRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRG 246
| |
| LA + AI + + ++VA F L YP L+ RY +D D + +A+G +RG
| |
| Sbjct: 174 FMLAASHAIGRNAVIDEEVAAFLAGILLVRYPALLQARYKIDPAQMDGPGVVEAVGLRRG 233
| |
|
| |
| Query: 247 CLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| C GG ++ +K +V++ D R+ GR+S E P
| |
| Sbjct: 234 CRTKGGGLDLEKAAQVLLTDYRSGALGRISLETP 267
| |
|
| |
|
| |
| >ref|ZP_01551976.1| GTP-binding protein [Methylophilales bacterium HTCC2181]
| |
| gb|EAV47034.1| GTP-binding protein [Methylophilales bacterium HTCC2181]
| |
| Length = 297
| |
|
| |
| Score = 180 bits (457), Expect = 7e-044
| |
| Identities = 103/284 (36%), Positives = 166/284 (58%), Gaps = 12/284 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPR--IMLLN 58
| |
| M+IQWFPGHM A+++ E L+ D+V E++DARIP SS NPMI+ + K + R + +LN
| |
| Sbjct: 1 MSIQWFPGHMTAAKKKAEEALETNDLVIEVLDARIPGSSTNPMIDTMRKERQRPCLKILN 60
| |
|
| |
| Query: 59 KADKADAAVTQQWKEHFENQG-IRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| K+D AD VT+ W E+F ++++++ + + +I+P L K R +K
| |
| Sbjct: 61 KSDLADPKVTKAWVEYFNAMPHTTAITLSAKSVGDVKKILP-----LCSKLAPHRNSSIK 115
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| P +R LI+G+PNVGKST+IN L K IAK G+ P +T QQ + + + L DTPG++W
| |
| Sbjct: 116 P--LRMLIMGVPNVGKSTIINALHHKKIAKVGNEPAVTKQQQRIILNASMILTDTPGMMW 173
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD-EIPEDIAE 236
| |
| PK +E+ G LA + I + + + A+F ++++Y E + ++Y ++ PED E
| |
| Sbjct: 174 PKISNEIDGYYLAASHTIGINAYDEIETAMFLFHTIKDNYAELISKKYKIEPPFPED-EE 232
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + +KRG ++ GG + K+ ++ D R G +S E P
| |
| Sbjct: 233 FLKILAKKRGFIVKGGAEDLYKSATTLLNDYRQGILGSISLESP 276
| |
|
| |
|
| |
| >ref|NP_950530.1| hypothetical protein PAM278 [Onion yellows phytoplasma OY-M]
| |
| dbj|BAD04363.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M]
| |
| Length = 295
| |
|
| |
| Score = 180 bits (456), Expect = 9e-044
| |
| Identities = 94/279 (33%), Positives = 158/279 (56%), Gaps = 5/279 (1%)
| |
|
| |
| Query: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDIL--KNKPRIMLLNKADK 62
| |
| WFPGHM K ++ L L+DIV ++DARIP+SS N I ++ + KP ++LLNK
| |
| Sbjct: 6 WFPGHMKKTFDQIKNNLSLVDIVLVILDARIPLSSLNSQIFSLINQRQKPLLILLNKFSL 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA-- 120
| |
| D + ++ + I L+I+++ L +I + ++ K +++ + +
| |
| Sbjct: 66 TDPCKINNFIANYHKKQIPVLTIDAIKSPKLQEIYQKALTTIKAKNPLFKSRRIATQTPN 125
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGK-ELELLDTPGILWPK 179
| |
| I+A+I+G PNVGKSTLIN A+K + KT + G T QW+ + K ++ LDTPG+LW
| |
| Sbjct: 126 IKAMIVGTPNVGKSTLINSFAQKKVLKTANLAGTTKRIQWIDIAKPNIQFLDTPGVLWHN 185
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| F D + L LA+ G KDSI+ L+ + + L +L +HY L++R+ LD+ L D
| |
| Sbjct: 186 FSDPRISLALALAGCFKDSILPLEKLGIHALCYLIKHYGTNLQKRFNLDQNDLSNPNLVD 245
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| IG+KR ++ + ++++++IR G+L+F+
| |
| Sbjct: 246 IIGQKRNIYTKNQKVDQSRVYQMLLQEIRQGNLGKLNFD 284
| |
|
| |
|
| |
| >ref|YP_456639.1| GTP-binding protein [Aster yellows witches'-broom phytoplasma AYWB]
| |
| gb|ABC65560.1| GTP-binding protein [Aster yellows witches'-broom phytoplasma AYWB]
| |
| Length = 295
| |
|
| |
| Score = 179 bits (455), Expect = 1e-043
| |
| Identities = 93/282 (32%), Positives = 158/282 (56%), Gaps = 5/282 (1%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDIL--KNKPRIMLLNK 59
| |
| T WFPGHM K ++ L L+DIV ++DARIP+SS N I ++ + KP ++LLNK
| |
| Sbjct: 3 TFNWFPGHMKKTFDQIKNNLSLVDIVLVILDARIPLSSLNSQIFSLINQRQKPILILLNK 62
| |
|
| |
| Query: 60 ADKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPR 119
| |
| D + ++ + I L+I+++ + +I + ++ K +++ + +
| |
| Sbjct: 63 FSLTDPCKINNFIANYNKKQIPVLTIDAIKSPKIQEIYQKALTTIKAKNSLFKSRRIATQ 122
| |
|
| |
| Query: 120 A--IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGK-ELELLDTPGIL 176
| |
| I+A+I+G PNVGKSTLIN A+K + KT + G T QW+ + K ++ LDTPG+L
| |
| Sbjct: 123 TPNIKAMIVGTPNVGKSTLINSFAQKKVLKTANLAGTTKRIQWIDIAKPNIQFLDTPGVL 182
| |
|
| |
| Query: 177 WPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAE 236
| |
| W F D + L LA+ G KDSI L+ + + L +L +HY L++R+ L++
| |
| Sbjct: 183 WHNFSDPRISLALALAGCFKDSIFPLEKLGIHALCYLTKHYGSNLQKRFNLNQNDLSNTN 242
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| L D IG+KR ++ + ++++++IR G+L+F+
| |
| Sbjct: 243 LVDIIGQKRNICNKNQKVDQSRVYQMLLQEIRQGNLGKLNFD 284
| |
|
| |
|
| |
| >ref|NP_192188.2| GTP-binding family protein [Arabidopsis thaliana]
| |
| gb|AAN12960.1| unknown protein [Arabidopsis thaliana]
| |
| Length = 372
| |
|
| |
| Score = 179 bits (453), Expect = 2e-043
| |
| Identities = 101/282 (35%), Positives = 158/282 (56%), Gaps = 7/282 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| +QW+PGH+ K +E+ E+LKL+D+V E+ DARIP+S+ +P ++ L N+ RI++LN+ D
| |
| Sbjct: 96 VQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDM 155
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W +F QGI+ + N G G ++ +K + + + R KG+ PR++R
| |
| Sbjct: 156 ISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVR 215
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A IIG PNVGKS+LINRL K+ I RPG+T +WVK+GK+L+LLD+PG+L + +D
| |
| Sbjct: 216 AGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDD 275
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + ++LA+ I + + DVA ++ L K Y +I +L G
| |
| Sbjct: 276 QAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKI-----QLEGNCG 330
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEV--IIRDIRTEKFGRLSFEQPTM 282
| |
| +K + L D I+ D R KFG +S E+P +
| |
| Sbjct: 331 KKFVKTLGLNLFGGDSHQAAFRILTDFRKGKFGYVSLERPPL 372
| |
|
| |
|
| |
| >gb|AAL38787.1| unknown protein [Arabidopsis thaliana]
| |
| Length = 372
| |
|
| |
| Score = 179 bits (453), Expect = 2e-043
| |
| Identities = 101/282 (35%), Positives = 158/282 (56%), Gaps = 7/282 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| +QW+PGH+ K +E+ E+LKL+D+V E+ DARIP+S+ +P ++ L N+ RI++LN+ D
| |
| Sbjct: 96 VQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDM 155
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W +F QGI+ + N G G ++ +K + + + R KG+ PR++R
| |
| Sbjct: 156 ISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVR 215
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A IIG PNVGKS+LINRL K+ I RPG+T +WVK+GK+L+LLD+PG+L + +D
| |
| Sbjct: 216 AGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDD 275
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + ++LA+ I + + DVA ++ L K Y +I +L G
| |
| Sbjct: 276 QAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKI-----QLEGNCG 330
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEV--IIRDIRTEKFGRLSFEQPTM 282
| |
| +K + L D I+ D R KFG +S E+P +
| |
| Sbjct: 331 KKFVKTLGLNLFGGDSHQAAFRILTDFRKGKFGYVSLERPPL 372
| |
|
| |
|
| |
| >gb|AAD15335.1| hypothetical protein [Arabidopsis thaliana]
| |
| emb|CAB77764.1| hypothetical protein [Arabidopsis thaliana]
| |
| Length = 375
| |
|
| |
| Score = 179 bits (453), Expect = 2e-043
| |
| Identities = 101/282 (35%), Positives = 158/282 (56%), Gaps = 7/282 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| +QW+PGH+ K +E+ E+LKL+D+V E+ DARIP+S+ +P ++ L N+ RI++LN+ D
| |
| Sbjct: 99 VQWYPGHIMKTEKELREQLKLMDVVIEVRDARIPLSTTHPKMDAWLGNRKRILVLNREDM 158
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W +F QGI+ + N G G ++ +K + + + R KG+ PR++R
| |
| Sbjct: 159 ISNDDRNDWARYFAKQGIKVIFTNGKLGMGAMKLGRLAKSLAGDVNGKRREKGLLPRSVR 218
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A IIG PNVGKS+LINRL K+ I RPG+T +WVK+GK+L+LLD+PG+L + +D
| |
| Sbjct: 219 AGIIGYPNVGKSSLINRLLKRKICAAAPRPGVTREMKWVKLGKDLDLLDSPGMLPMRIDD 278
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| + ++LA+ I + + DVA ++ L K Y +I +L G
| |
| Sbjct: 279 QAAAIKLAICDDIGEKAYDFTDVAGILVQMLARIPEVGAKALYNRYKI-----QLEGNCG 333
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEV--IIRDIRTEKFGRLSFEQPTM 282
| |
| +K + L D I+ D R KFG +S E+P +
| |
| Sbjct: 334 KKFVKTLGLNLFGGDSHQAAFRILTDFRKGKFGYVSLERPPL 375
| |
|
| |
|
| |
| >gb|EAZ34391.1| hypothetical protein OsJ_017874 [Oryza sativa (japonica
| |
| cultivar-group)]
| |
| Length = 337
| |
|
| |
| Score = 178 bits (452), Expect = 3e-043
| |
| Identities = 91/242 (37%), Positives = 145/242 (59%), Gaps = 4/242 (1%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| +QW+PGH+AK +E+ E+LKL+D+V E+ DARIP+++ +P ++ L N+ RI+++N+ D
| |
| Sbjct: 95 VQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLATSHPKMDAWLGNRKRIIVMNREDM 154
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W +F NQG + + N G G ++ +K + + R KG+ PRA+R
| |
| Sbjct: 155 VSNEDRNAWASYFANQGTKVVYSNGQLGMGTMKLGRMAKSLASTVNTKRREKGLLPRAVR 214
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A I+G PNVGKS+LINRL K+ + RPG+T +WV+ G +LELLD+PGIL + D
| |
| Sbjct: 215 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGSDLELLDSPGILPMRISD 274
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEH---YPERLKERYGLDEIPEDIAELFD 239
| |
| + ++LA+ I + + DVA ++ L H PE + RY LD + D +++
| |
| Sbjct: 275 QTAAIKLAICDDIGERSYDFADVAAILVQLLVRHPAVGPEAFRRRYRLD-MDSDCGKMYG 333
| |
|
| |
| Query: 240 AI 241
| |
| +I
| |
| Sbjct: 334 SI 335
| |
|
| |
|
| |
| >gb|EAY98148.1| hypothetical protein OsI_019381 [Oryza sativa (indica
| |
| cultivar-group)]
| |
| Length = 337
| |
|
| |
| Score = 178 bits (452), Expect = 3e-043
| |
| Identities = 91/242 (37%), Positives = 145/242 (59%), Gaps = 4/242 (1%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| +QW+PGH+AK +E+ E+LKL+D+V E+ DARIP+++ +P ++ L N+ RI+++N+ D
| |
| Sbjct: 95 VQWYPGHIAKTEKELKEQLKLMDVVIEVRDARIPLATSHPKMDAWLGNRKRIIVMNREDM 154
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W +F NQG + + N G G ++ +K + + R KG+ PRA+R
| |
| Sbjct: 155 VSNEDRNAWASYFANQGTKVVYSNGQLGMGTMKLGRMAKSLASTVNTKRREKGLLPRAVR 214
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A I+G PNVGKS+LINRL K+ + RPG+T +WV+ G +LELLD+PGIL + D
| |
| Sbjct: 215 AGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELKWVRFGSDLELLDSPGILPMRISD 274
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEH---YPERLKERYGLDEIPEDIAELFD 239
| |
| + ++LA+ I + + DVA ++ L H PE + RY LD + D +++
| |
| Sbjct: 275 QTAAIKLAICDDIGERSYDFADVAAILVQLLVRHPAVGPEAFRRRYRLD-MDSDCGKMYG 333
| |
|
| |
| Query: 240 AI 241
| |
| +I
| |
| Sbjct: 334 SI 335
| |
|
| |
|
| |
| >ref|YP_001014099.1| Predicted GTPases [Prochlorococcus marinus str. NATL1A]
| |
| gb|ABM74834.1| Predicted GTPases [Prochlorococcus marinus str. NATL1A]
| |
| Length = 287
| |
|
| |
| Score = 178 bits (451), Expect = 3e-043
| |
| Identities = 101/286 (35%), Positives = 167/286 (58%), Gaps = 12/286 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ E L+ +D+V+E+ DARIP+++ +P ++ LK K +I++LN+ D
| |
| Sbjct: 6 IQWYPGHIAKAEKQLKENLRKVDLVFEVRDARIPLATSHPYLQKWLKGKKQILVLNRKDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| + Q W + ++G ++ G G+ QI A+ QE R +G+K RAIR
| |
| Sbjct: 66 INIDAYQAWDKKLRSEGKVPWWCDAKAGTGVLQIKNAAIRAGQELNQRRLDRGMKNRAIR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| L +G PNVGKS LINRL KK + + +PG+T S +WV++G++L+LLD PG+L P+FED
| |
| Sbjct: 126 VLTLGFPNVGKSALINRLVKKKVVSSSRKPGVTRSLRWVRLGQDLDLLDAPGVLPPRFED 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLE--EHYPER------LKERYGLDEIPEDI 234
| |
| + L+LA+ I + + + VA+ ++ LE E+ E L+ RYG+ + E I
| |
| Sbjct: 186 QNAALKLAICDDIGQAAYDTEQVAISFMKLLETLENIQEAGIKSMCLQNRYGI-FVNETI 244
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + + + SG + + ++ ++ D R G +S E P
| |
| Sbjct: 245 KDKYSWLLSAAERHTSG---DTQRMSQRLLDDFRKNLLGNISLELP 287
| |
|
| |
|
| |
| >ref|YP_292752.1| GTP-binding [Prochlorococcus marinus str. NATL2A]
| |
| gb|AAZ59049.1| GTP-binding [Prochlorococcus marinus str. NATL2A]
| |
| Length = 287
| |
|
| |
| Score = 178 bits (451), Expect = 3e-043
| |
| Identities = 101/286 (35%), Positives = 166/286 (58%), Gaps = 12/286 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ E L +D+V+E+ DARIP+++ +P ++ LK K +I++LN+ D
| |
| Sbjct: 6 IQWYPGHIAKAEKQLKENLSKVDLVFEVRDARIPLATSHPYLQKWLKGKKQILVLNRKDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| + Q W + ++G ++ G G+ QI A+ QE R +G+K RAIR
| |
| Sbjct: 66 INVEAYQAWDKKLRSEGKVPWWCDAKAGTGVLQIKHAAIRAGQELNQRRLDRGMKNRAIR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| L +G PNVGKS LINRL KK + + +PG+T S +WV++G++L+LLD PG+L P+FED
| |
| Sbjct: 126 VLTLGFPNVGKSALINRLVKKKVVSSSRKPGVTRSLRWVRLGQDLDLLDAPGVLPPRFED 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLE--EHYPER------LKERYGLDEIPEDI 234
| |
| + L+LA+ I + + + VA+ ++ LE E+ E L+ RYG+ + E I
| |
| Sbjct: 186 QNAALKLAICDDIGQAAYDTEQVAISFMKLLETLENIQEAGIKSMCLQNRYGI-FVNETI 244
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + + + SG + + ++ ++ D R G +S E P
| |
| Sbjct: 245 KDKYSWLLSAAERHTSG---DTQRMSQRLLDDFRKNLLGNISLELP 287
| |
|
| |
|
| |
| >ref|ZP_00514641.1| GTP-binding [Crocosphaera watsonii WH 8501]
| |
| gb|EAM52479.1| GTP-binding [Crocosphaera watsonii WH 8501]
| |
| Length = 279
| |
|
| |
| Score = 177 bits (450), Expect = 4e-043
| |
| Identities = 95/283 (33%), Positives = 166/283 (58%), Gaps = 11/283 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA R++ E+L +D+++E++DARIP++S +P + + +KPR+++LN+ D
| |
| Sbjct: 4 IQWYPGHIAKAERQLKEQLNRVDVIFEVLDARIPLASHHPDVPGWIGDKPRLVVLNRTDM 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| +V Q W F QG N+ G+G+ + A++ + +R + +G++PRA+R
| |
| Sbjct: 64 IPESVRQGWLNWFAAQGETLYCTNAKQGKGIKALKKAAQAAGVQMNERRQQRGMRPRAVR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A++IG PNVGKS LINRL + +A + R G+T QW+++ LELLD PGI+ K E+
| |
| Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVAASARRAGVTRQLQWIRISDALELLDAPGIIPAKLEN 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEE-HYPERLKERYGLDEIPEDIA--ELFD 239
| |
| + ++LA+ I ++ + Q + + L E ++ L RY LD P++I E +
| |
| Sbjct: 184 QEDAVKLAICEDIGEAAYDNQQIGAALIDLLVELNFDNILSSRYQLD--PQNITGEEYIE 241
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| ++G + G + ++ T ++ D R G++ E P +
| |
| Sbjct: 242 SLGNSK---FKG---DTERATMQLLNDFRKGVMGKIPLELPQL 278
| |
|
| |
|
| |
| >ref|YP_476892.1| GTPase family protein [Synechococcus sp. JA-2-3B'a(2-13)]
| |
| gb|ABD01629.1| GTPase family protein [Synechococcus sp. JA-2-3B'a(2-13)]
| |
| Length = 283
| |
|
| |
| Score = 177 bits (449), Expect = 6e-043
| |
| Identities = 103/282 (36%), Positives = 166/282 (58%), Gaps = 11/282 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA ++ E+L+ +D V E++DARIP++SR+P + L KPR++ LN+AD
| |
| Sbjct: 6 IQWYPGHIAKAIGQLREELQRVDAVIEVLDARIPLASRHPELGRWLGEKPRLLALNRADC 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| +A + W+E+F QGI N +G+G+N++ A + Q R + +G++PRA+R
| |
| Sbjct: 66 IEAGDLKAWQEYFLRQGIPVYPTNGRSGEGVNRLKQAVLHLGQSVNTRRQQRGMRPRAVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+++G PNVGKS L+NRL + A++ RPG+T +WV++G EL+LLD+PGI+ P D
| |
| Sbjct: 126 AVVVGFPNVGKSALLNRLLGRRAAESAARPGVTRQLRWVRLGGELDLLDSPGIIPPSLPD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER---LKERYGL-DEIPEDIAELF 238
| |
| + LA+ I ++ + + VA L + P+ L++RYG D IP A +
| |
| Sbjct: 186 QQAASLLAICDDIGEAAYDPERVAAHFLDQVLRVQPQAGSLLQKRYGWPDPIPPGGAAV- 244
| |
|
| |
| Query: 239 DAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + E+R G + + ++ D R G L+ E P
| |
| Sbjct: 245 QELAERR---YQG---DPQRAARQVLNDYRKGLLGPLALELP 280
| |
|
| |
|
| |
| >ref|YP_513520.1| GTP-binding protein [Francisella tularensis subsp. holarctica]
| |
| ref|YP_763352.1| GTP-binding protein [Francisella tularensis subsp. holarctica
| |
| OSU18]
| |
| emb|CAJ79224.1| GTP-binding protein [Francisella tularensis subsp. holarctica LVS]
| |
| gb|ABI82715.1| GTP-binding protein [Francisella tularensis subsp. holarctica
| |
| OSU18]
| |
| gb|EBA52391.1| GTP-binding protein [Francisella tularensis subsp. holarctica 257]
| |
| Length = 290
| |
|
| |
| Score = 176 bits (447), Expect = 1e-042
| |
| Identities = 102/285 (35%), Positives = 158/285 (55%), Gaps = 25/285 (8%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| + WFPGHM KA +E +K+ IDI E+VDARIP SS N ++E I+ +KP I +L+K D
| |
| Sbjct: 2 LHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKNDL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T+QW ++++ I ++ N IV ++ Q+K + +G + IR
| |
| Sbjct: 62 ADTTITKQWLDYYKGSAIAVNTLEDKN------IVKRILDLAQKKCPQ---RGTVLKPIR 112
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+I G+PNVGKST+IN+LA + +AKTG+ P +T QQ + + K + DTPGI++P +
| |
| Sbjct: 113 AIIFGLPNVGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIFDTPGIMFPSPKS 172
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG-------LDEIPEDIA 235
| |
| E R+A G+I+D+ ++ + A + L F E Y + RY L+ P++I
| |
| Sbjct: 173 ESSAFRIAAIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYNFISEKDFLERHPQEI- 231
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| L D K N + + I+ D R FG++S E P
| |
| Sbjct: 232 -LKDISIAKTNS-------NLKQAAKNIVHDFRAGHFGKISLEDP 268
| |
|
| |
|
| |
| >gb|AAX77842.1| unknown protein [synthetic construct]
| |
| Length = 325
| |
|
| |
| Score = 176 bits (446), Expect = 1e-042
| |
| Identities = 102/285 (35%), Positives = 158/285 (55%), Gaps = 25/285 (8%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| + WFPGHM KA +E +K+ IDI E+VDARIP SS N ++E I+ +KP I +L+K D
| |
| Sbjct: 28 LHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKNDL 87
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T+QW ++++ I ++ N IV ++ Q+K + +G + IR
| |
| Sbjct: 88 ADTTITKQWLDYYKGSAIAVNTLEDKN------IVKRILDLAQKKCPQ---RGTVLKPIR 138
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+I G+PNVGKST+IN+LA + +AKTG+ P +T QQ + + K + DTPGI++P +
| |
| Sbjct: 139 AIIFGLPNVGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIFDTPGIMFPSPKS 198
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG-------LDEIPEDIA 235
| |
| E R+A G+I+D+ ++ + A + L F E Y + RY L+ P++I
| |
| Sbjct: 199 ENSAFRIAAIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYNFISEKDFLERHPQEI- 257
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| L D K N + + I+ D R FG++S E P
| |
| Sbjct: 258 -LKDISIAKTNS-------NLKQAAKNIVHDFRAGHFGKISLEDP 294
| |
|
| |
|
| |
| >ref|YP_325139.1| GTP-binding [Anabaena variabilis ATCC 29413]
| |
| gb|ABA24244.1| GTP-binding [Anabaena variabilis ATCC 29413]
| |
| Length = 293
| |
|
| |
| Score = 176 bits (446), Expect = 1e-042
| |
| Identities = 102/288 (35%), Positives = 162/288 (56%), Gaps = 14/288 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA + + E+L +D+V+E+ DARIP+++ +P I++ + NK RI++LN+ D
| |
| Sbjct: 12 IQWYPGHIAKAEKNLKEQLSRVDVVFEVRDARIPLATHHPQIDEWVGNKARILVLNRLDM 71
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| V W ++F+N+G N+ +GQG+ + A++ E R R +G+ PRA+R
| |
| Sbjct: 72 IPPQVRSLWIDYFQNRGEVPYCTNAQHGQGVAGVAKAAQAAGVELNQRRRDRGMLPRAVR 131
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A++IG PNVGKS LINRL K + ++ RPG+T +WV++ +LELLD PG++ K +
| |
| Sbjct: 132 AVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVRISDQLELLDAPGVIPVKLGN 191
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVA---VFGLRFLEEHYPERLKE-----RYGLDEIPEDI 234
| |
| + ++LA+ I + + Q VA + + L+E E L RY LD P
| |
| Sbjct: 192 QEAAVKLAICDDIGQASYDNQLVAAALIDIVNSLQEQAGELLPRSPLYARYELDPTPHTG 251
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| A+ E R G + ++T ++ D R G L E P M
| |
| Sbjct: 252 EGYLHALAEYR---HKG---DVERTARQLLTDYRKGLLGTLPLELPPM 293
| |
|
| |
|
| |
| >ref|YP_170135.1| GTP-binding protein [Francisella tularensis subsp. tularensis SCHU
| |
| S4]
| |
| ref|YP_667267.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC
| |
| 198]
| |
| emb|CAG45802.1| GTP-binding protein [Francisella tularensis subsp. tularensis SCHU
| |
| S4]
| |
| emb|CAL09185.1| GTP-binding protein [Francisella tularensis subsp. tularensis FSC
| |
| 198]
| |
| Length = 290
| |
|
| |
| Score = 176 bits (446), Expect = 1e-042
| |
| Identities = 102/285 (35%), Positives = 158/285 (55%), Gaps = 25/285 (8%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| + WFPGHM KA +E +K+ IDI E+VDARIP SS N ++E I+ +KP I +L+K D
| |
| Sbjct: 2 LHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKNDL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T+QW ++++ I ++ N IV ++ Q+K + +G + IR
| |
| Sbjct: 62 ADTTITKQWLDYYKGSAIAVNTLEDKN------IVKRILDLAQKKCPQ---RGTVLKPIR 112
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+I G+PNVGKST+IN+LA + +AKTG+ P +T QQ + + K + DTPGI++P +
| |
| Sbjct: 113 AIIFGLPNVGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIFDTPGIMFPSPKS 172
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG-------LDEIPEDIA 235
| |
| E R+A G+I+D+ ++ + A + L F E Y + RY L+ P++I
| |
| Sbjct: 173 ENSAFRIAAIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYNFISEKDFLERHPQEI- 231
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| L D K N + + I+ D R FG++S E P
| |
| Sbjct: 232 -LKDISIAKTNS-------NLKQAAKNIVHDFRAGHFGKISLEDP 268
| |
|
| |
|
| |
| >ref|NP_484788.1| hypothetical protein all0745 [Nostoc sp. PCC 7120]
| |
| dbj|BAB72702.1| all0745 [Nostoc sp. PCC 7120]
| |
| Length = 293
| |
|
| |
| Score = 176 bits (446), Expect = 1e-042
| |
| Identities = 102/288 (35%), Positives = 163/288 (56%), Gaps = 14/288 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA + + E+L +D+V+E+ DARIP+++ +P I++ + NK RI++LN+ D
| |
| Sbjct: 12 IQWYPGHIAKAEKNLKEQLSRVDVVFEVRDARIPLATHHPQIDEWVGNKARILVLNRLDM 71
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| V W ++F+N+G N+ +GQG+ + A++ E R R +G+ PRA+R
| |
| Sbjct: 72 IPPQVRSLWIDYFQNRGEVPYCTNAQHGQGVVGVAKAAQAAGVELNQRRRDRGMLPRAVR 131
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A++IG PNVGKS LINRL K + ++ RPG+T +WV++ +LELLD PG++ K +
| |
| Sbjct: 132 AVVIGFPNVGKSALINRLLGKRVVESAARPGVTRQLRWVRISDQLELLDAPGVIPVKLGN 191
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVA---VFGLRFLEEHYPERLKE-----RYGLDEIPEDI 234
| |
| + ++LA+ I + + Q VA + + L+E E L + RY LD P
| |
| Sbjct: 192 QEAAVKLAICDDIGQASYDNQLVAAALIDLVNSLQEQAGELLPKSPLYTRYELDPTPHTG 251
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| A+ E R G + ++T ++ D R G L E P M
| |
| Sbjct: 252 EGYLHALAEYR---HKG---DVERTARQLLTDYRKGLLGTLPLELPPM 293
| |
|
| |
|
| |
| >ref|YP_001122125.1| GTP-binding protein [Francisella tularensis subsp. tularensis
| |
| WY96-3418]
| |
| gb|ABO47004.1| GTP-binding protein [Francisella tularensis subsp. tularensis
| |
| WY96-3418]
| |
| Length = 290
| |
|
| |
| Score = 176 bits (445), Expect = 2e-042
| |
| Identities = 102/285 (35%), Positives = 158/285 (55%), Gaps = 25/285 (8%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| + WFPGHM KA +E +K+ IDI E+VDARIP SS N ++E I+ +KP I +L+K D
| |
| Sbjct: 2 LHWFPGHMHKATKEFRKKMPSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKNDL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T+QW ++++ I ++ N IV ++ Q+K + +G + IR
| |
| Sbjct: 62 ADTTITKQWLDYYKGSAIAVNTLEDKN------IVKRILDLAQKKCPQ---RGTVLKPIR 112
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+I G+PNVGKST+IN+LA + +AKTG+ P +T QQ + + K + DTPGI++P +
| |
| Sbjct: 113 AIIFGLPNVGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIFDTPGIMFPSPKS 172
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYG-------LDEIPEDIA 235
| |
| E R+A G+I+D+ ++ + A + L F E Y + RY L+ P++I
| |
| Sbjct: 173 ESSAFRIAAIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARYKFISEKDFLERHPQEI- 231
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| L D K N + + I+ D R FG++S E P
| |
| Sbjct: 232 -LKDISIAKTNS-------NLKQAAKNIVHDFRAGHFGKISLEDP 268
| |
|
| |
|
| |
| >ref|ZP_01623463.1| GTP-binding protein [Lyngbya sp. PCC 8106]
| |
| gb|EAW34602.1| GTP-binding protein [Lyngbya sp. PCC 8106]
| |
| Length = 277
| |
|
| |
| Score = 176 bits (445), Expect = 2e-042
| |
| Identities = 97/283 (34%), Positives = 162/283 (57%), Gaps = 11/283 (3%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| M IQW+PGH+AKA R + E+LK +D+V E+ DARIP+++ +P + + +K +++++N+
| |
| Sbjct: 1 MAIQWYPGHIAKAERNLQEQLKRVDVVLEVRDARIPLTTHHPQVPQWVGSKAKVLVINRM 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D V QQW++ F QG NS GQG+ ++ A++++ E + R++G+ PR
| |
| Sbjct: 61 DMISLEVKQQWEDWFMEQGETPYFTNSQKGQGVAEVAKAARKVGVEVNQKRRSRGMLPRP 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +RA+++G PNVGKS LINRL K+ + + R G+T S +WV++ ++ELLD PG++ +
| |
| Sbjct: 121 VRAVVMGFPNVGKSALINRLLKRKVVDSARRAGVTRSLRWVRISDQIELLDAPGVIPARI 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRF-LEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| +E L+LAV I ++ Q+VA + F L+ +L +RY P++I
| |
| Sbjct: 181 NNEEKALKLAVCEDIGEASYENQEVAAALVEFLLDLGLESKLGDRYNF--TPDNIT---- 234
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYD--KTTEVIIRDIRTEKFGRLSFEQP 280
| |
| GE ++ D +T ++ D R G L E P
| |
| Sbjct: 235 --GEVYLHQLASHSYQDDIERTARHLLNDFRKGLLGALPLELP 275
| |
|
| |
|
| |
| >ref|NP_874614.1| Predicted GTPase [Prochlorococcus marinus subsp. marinus str.
| |
| CCMP1375]
| |
| gb|AAP99266.1| Predicted GTPase [Prochlorococcus marinus subsp. marinus str.
| |
| CCMP1375]
| |
| Length = 287
| |
|
| |
| Score = 175 bits (444), Expect = 2e-042
| |
| Identities = 96/287 (33%), Positives = 167/287 (58%), Gaps = 14/287 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++++ L+ +D+V E+ DARIP+++ +P + ++NK ++++N+ D
| |
| Sbjct: 6 IQWYPGHIAKAEQQLSKSLEKVDLVVEVRDARIPLATGHPCLHKWIRNKKHLLVINRRDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W F+ G + N+ +G G N+I A+ ++ + +R ++G++ RA+R
| |
| Sbjct: 66 ISQKAFNSWDNWFKENGQEAWWCNAKDGNGTNKIKEAAIKLGNDLNNRRESRGMRKRAVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| ALI+G PNVGKS LINRL K + K+ R G+T S QWV+VG++L+LLD PG+L P+ ED
| |
| Sbjct: 126 ALILGFPNVGKSALINRLVNKKVVKSARRAGVTKSLQWVRVGQQLDLLDAPGVLPPQLED 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGLD-EIPED 233
| |
| + ++LA+ I + +++ VA+ L L + E L++RYG+ E +
| |
| Sbjct: 186 QEAAVKLALCDDIGQASYDVESVAIKFLNILNQVKNESDFETSNQILEKRYGISWEESNN 245
| |
|
| |
| Query: 234 IAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| L+ + SG N ++ ++ ++ D R G +S E P
| |
| Sbjct: 246 NVHLW--LENAANYHTSG---NTNRMSQRLLDDFRKRLIGTISLELP 287
| |
|
| |
|
| |
| >ref|YP_171145.1| hypothetical protein syc0435_d [Synechococcus elongatus PCC 6301]
| |
| ref|YP_400131.1| GTP-binding [Synechococcus elongatus PCC 7942]
| |
| dbj|BAD78625.1| hypothetical protein [Synechococcus elongatus PCC 6301]
| |
| gb|ABB57144.1| GTP-binding [Synechococcus elongatus PCC 7942]
| |
| Length = 287
| |
|
| |
| Score = 175 bits (444), Expect = 2e-042
| |
| Identities = 102/286 (35%), Positives = 165/286 (57%), Gaps = 15/286 (5%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA R++ E+LK +D+V E+ DARIP+++ +P ++ L ++ R+++LN+ D
| |
| Sbjct: 6 IQWYPGHIAKAERQLQEQLKRVDVVLEVRDARIPLATDHPRLKSWLGSRERLLILNRLDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| A Q W + F +QG R L ++ G G+ Q+ A++ R + +G+ PRA+R
| |
| Sbjct: 66 IPAPARQAWIDWFRSQGDRVLLTDAHAGTGVAQLSQAAQAAGAAMNARRKQRGMLPRAVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A++IG PNVGKS LINRL KK + ++ R G+T S +WV+V + L+LLD PG+L + +D
| |
| Sbjct: 126 AVVIGFPNVGKSALINRLVKKKVVESARRAGVTRSLRWVRVSEHLDLLDAPGVLPSRLDD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVA---VFGLRFLEEH-----YPERLKERYGLDEIPEDI 234
| |
| + L+LA+ I ++ + Q VA V L+ LE P +RYGL +D
| |
| Sbjct: 186 QTAALKLALCDDIGEAAYDNQRVAAALVDCLQALEAQPLSGVTPTLFFDRYGLS--VDDT 243
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| E + A C + ++T +++ D R G ++ E P
| |
| Sbjct: 244 GEAYLAALADHRCQG-----DRERTALMLLNDFRRGSLGPIALELP 284
| |
|
| |
|
| |
| >ref|ZP_01006090.1| hypothetical protein P9211_07792 [Prochlorococcus marinus str. MIT
| |
| 9211]
| |
| gb|EAQ09828.1| hypothetical protein P9211_07792 [Prochlorococcus marinus str. MIT
| |
| 9211]
| |
| Length = 303
| |
|
| |
| Score = 175 bits (443), Expect = 3e-042
| |
| Identities = 96/285 (33%), Positives = 165/285 (57%), Gaps = 11/285 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ + + +D+V E+ DARIP+S+ +P +E + NK ++++N+ D
| |
| Sbjct: 22 IQWYPGHIAKAEKQLKKHIDKVDLVIEVRDARIPISTSHPHLEKWITNKKHLLVINRRDM 81
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| ++W + F+++G N+ NG G+ I A+ + E +R +++G++ RA+R
| |
| Sbjct: 82 ITNKAIKEWDQWFKSEGKTPWWCNAKNGNGVAMIKEAAIRLGDELNERRKSRGMRSRAVR 141
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINRL + + ++ R G+T S +WV++G++L+LLD PG+L P+ E+
| |
| Sbjct: 142 ALTLGFPNVGKSALINRLTMQKVVESSRRAGVTKSLRWVRLGQQLDLLDAPGVLPPRLEN 201
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRF---LEEHY----PERLKERYGLDEIPEDIA 235
| |
| + L LA+ I + +++ V + LR LEE Y E LKERYG+ +
| |
| Sbjct: 202 QKAALLLAICDDIGQAAYDVESVGIAFLRLLSALEETYSGFNKESLKERYGI-ALENCEP 260
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + D + S L + + ++ D R G++S E P
| |
| Sbjct: 261 NVHDWLANSASVHTSDDL---RRMAQKLLDDFRKLLLGQISLELP 302
| |
|
| |
|
| |
| >gb|EDJ82927.1| GTP-binding protein, HSR1-related [Petrotoga mobilis SJ95]
| |
| Length = 271
| |
|
| |
| Score = 174 bits (441), Expect = 5e-042
| |
| Identities = 101/282 (35%), Positives = 161/282 (57%), Gaps = 20/282 (7%)
| |
|
| |
| Query: 5 WFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKAD 64
| |
| W+PGH+ KA+ + + LKL++ V E++DAR P +SR E + +NK RI++LNK D D
| |
| Sbjct: 2 WYPGHIEKAKSLIKKHLKLVNAVVEILDARAPYASRAYEEEQLFRNKKRIIILNKKDLCD 61
| |
|
| |
| Query: 65 AAVTQQWKEHFENQG--IRSLSINSVNGQG--LNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| + W+++++ +G + SLS+N N + L I P I+ +KF+
| |
| Sbjct: 62 MKKIKLWEKYYKEKGEDVFSLSLNEFNVKDFFLKYIYP----IVPQKFNEKSL------- 110
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPK- 179
| |
| +I+GIPNVGKST INRL K A G++PGIT QW+ V K+L++LDTPG+L+PK
| |
| Sbjct: 111 ---MIVGIPNVGKSTFINRLKGKKSAAVGNKPGITRGLQWITVSKDLKVLDTPGVLYPKL 167
| |
|
| |
| Query: 180 FEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFD 239
| |
| F +LV +L + G++K L + + FL++ YP L E E+I E +
| |
| Sbjct: 168 FNKDLVN-KLILIGSLKAEDTELDEALFYLFDFLKQEYPNILDSVLKDWESCENIVEFIE 226
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPT 281
| |
| KR + GG+ +Y++ +R+I K+G +++E P+
| |
| Sbjct: 227 RFSMKRNFIKKGGVPDYERGRNAFLREITEGKYGGITYEIPS 268
| |
|
| |
|
| |
| >ref|ZP_01731365.1| hypothetical protein CY0110_06809 [Cyanothece sp. CCY0110]
| |
| gb|EAZ89241.1| hypothetical protein CY0110_06809 [Cyanothece sp. CCY0110]
| |
| Length = 278
| |
|
| |
| Score = 174 bits (440), Expect = 6e-042
| |
| Identities = 94/281 (33%), Positives = 164/281 (58%), Gaps = 11/281 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA R++ E+L +D+++E++DARIP++S +P + + +KPR+++LN+ D
| |
| Sbjct: 4 IQWYPGHIAKAERQLKEQLNRVDVIFEVLDARIPLASHHPDVPQWIGDKPRLLVLNRMDM 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| +V Q W F QG + N+ G+G+ + A++ + R +G++PRA+R
| |
| Sbjct: 64 IPESVRQDWLNWFAAQGEKIYYTNAKQGKGIKPLTKAAQGAGVQMNQRRCDRGMRPRAVR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A++IG PNVGKS LINRL + + + R G+T QW+++ LELLD PGI+ K ++
| |
| Sbjct: 124 AVVIGFPNVGKSALINRLLGRKVVASARRAGVTRQLQWIRISDSLELLDAPGIIPAKLDN 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEE-HYPERLKERYGLDEIPEDIA--ELFD 239
| |
| + ++LA+ I ++ + Q + + L E ++ + L RY +D P++I E +
| |
| Sbjct: 184 QEDAVKLAICEDIGEAAYDNQQIGAALVDLLVELNFEKILLSRYQVD--PQEITGEEYIE 241
| |
|
| |
| Query: 240 AIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| +GE R G + ++ T ++ D R G++ E P
| |
| Sbjct: 242 ILGETR---YQG---DKERATMQLLNDFRKGIMGQIPLELP 276
| |
|
| |
|
| |
| >ref|ZP_01628452.1| hypothetical protein N9414_15165 [Nodularia spumigena CCY9414]
| |
| gb|EAW47031.1| hypothetical protein N9414_15165 [Nodularia spumigena CCY9414]
| |
| Length = 294
| |
|
| |
| Score = 173 bits (438), Expect = 1e-041
| |
| Identities = 97/286 (33%), Positives = 158/286 (55%), Gaps = 14/286 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ E+L +D+V E+ D RIP+++ +P I++ + +K R+++LN+ D
| |
| Sbjct: 12 IQWYPGHIAKAEKKLKEQLTRVDVVLEVRDGRIPLATHHPQIDEWVGDKARVLVLNRLDM 71
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| V W + F+ G + S N+ GQG+ I A++ + R R +G+ PR +R
| |
| Sbjct: 72 ISPQVRSLWVDWFKRHGEIAYSTNAKQGQGITAIAKAAQAAGVKLNQRRRDRGMLPRPVR 131
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A++IG PNVGKS LINRL K + ++ RPG+T S +WV++ +ELELLD PG++ + +
| |
| Sbjct: 132 AVVIGFPNVGKSALINRLLGKRVVESAARPGVTRSLRWVRISEELELLDAPGVIPLRMGN 191
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHY--------PERLKERYGLDEIPEDI 234
| |
| + ++LA+ I + + Q VA + L E P L RY LD +P
| |
| Sbjct: 192 QEAAIKLAICDDIGQASYDNQLVASAFIDLLNELQETAGNLLPPSPLYTRYQLDPVPYTG 251
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| A+ E R G + ++T ++ D R G + E P
| |
| Sbjct: 252 ESYLHALAEHR---YKG---DVERTARHLLTDFRKGLLGNIPLELP 291
| |
|
| |
|
| |
| >ref|YP_898790.1| GTP-binding protein [Francisella tularensis subsp. novicida U112]
| |
| gb|ABK90036.1| GTP-binding protein [Francisella tularensis subsp. novicida U112]
| |
| Length = 290
| |
|
| |
| Score = 172 bits (436), Expect = 2e-041
| |
| Identities = 100/285 (35%), Positives = 158/285 (55%), Gaps = 25/285 (8%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| + WFPGHM KA +E +K+ IDI E+VDARIP SS N ++E I+ +KP I +L+K D
| |
| Sbjct: 2 LHWFPGHMHKATKEFRKKMSSIDIAIEIVDARIPDSSSNHVLEQIVGDKPIIKVLSKNDL 61
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD +T+QW ++++ I ++ N IV ++ Q+K + +G + IR
| |
| Sbjct: 62 ADTTITKQWLDYYKGSAIAVNTLEDKN------IVKRILDLAQKKCPQ---RGTVLKPIR 112
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+I G+PNVGKST+IN+LA + +AKTG+ P +T QQ + + K + DTPGI++P +
| |
| Sbjct: 113 AIIFGLPNVGKSTMINKLAGRKVAKTGNEPAVTKLQQRIDISKTFMIFDTPGIMFPSPKS 172
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER-------LKERYGLDEIPEDIA 235
| |
| E R+A G+I+D+ ++ + A + L F E Y + + E+ + P++I
| |
| Sbjct: 173 ESSAFRIAAIGSIRDTAMDYEGTACYLLNFFREKYTKNFLARCNFISEKDFSERHPQEI- 231
| |
|
| |
| Query: 236 ELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| L D K N + + I+ D R FG++S E P
| |
| Sbjct: 232 -LKDISIAKTNS-------NIKQAAKNIVHDFRAGHFGKISLEDP 268
| |
|
| |
|
| |
| >ref|NP_682297.1| hypothetical protein tlr1507 [Thermosynechococcus elongatus BP-1]
| |
| dbj|BAC09059.1| tlr1507 [Thermosynechococcus elongatus BP-1]
| |
| Length = 285
| |
|
| |
| Score = 172 bits (436), Expect = 2e-041
| |
| Identities = 94/279 (33%), Positives = 157/279 (56%), Gaps = 8/279 (2%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA R + E+LK +D+++E+ DARIP++S +P I K R+++LN D+
| |
| Sbjct: 5 IQWYPGHIAKAERALKEQLKQVDVIFEVRDARIPLASCHPQIRQWASGKQRLLVLNGMDR 64
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| QQW FE QG N+ G+G+ ++ A+ R + +G++ RA+R
| |
| Sbjct: 65 ISDRDRQQWLTWFETQGETVFFTNAQRGEGIRRLEQAAVRAGAAINQRRQQRGMQVRAVR 124
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+++G PNVGKS LINRL ++ + ++ RPG+T +WV++ LELLD PG+L F++
| |
| Sbjct: 125 AVVLGFPNVGKSALINRLLQQRVVESAARPGVTRQLRWVRLSPVLELLDAPGVLPMNFKN 184
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEE-HYPERLKERYGLDEIPEDIAELFDAI 241
| |
| + ++LA+ I + + VA + +++ Y ERL++RYGL L+D
| |
| Sbjct: 185 QEAAVKLAICDDIGQAAYDPCRVAPMLVEIMQQLGYAERLRDRYGLALTDTGETYLYDLA 244
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| + G L ++ +++D R G ++ E P
| |
| Sbjct: 245 ARR----YHGDL---ERAARQLLQDYRRGYLGAIALEHP 276
| |
|
| |
|
| |
| >ref|YP_722949.1| GTP-binding [Trichodesmium erythraeum IMS101]
| |
| gb|ABG52476.1| GTP-binding [Trichodesmium erythraeum IMS101]
| |
| Length = 285
| |
|
| |
| Score = 172 bits (435), Expect = 2e-041
| |
| Identities = 101/288 (35%), Positives = 164/288 (56%), Gaps = 14/288 (4%)
| |
|
| |
| Query: 1 MTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKA 60
| |
| MTIQW+PGH+AKA R + E+LK +D+V E+ DARIP+++R+P + + + +K +++++N+
| |
| Sbjct: 1 MTIQWYPGHIAKAERNLKEQLKRVDVVLEVRDARIPLATRHPQVSEWVGSKAQVLVINRI 60
| |
|
| |
| Query: 61 DKADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRA 120
| |
| D + V + W E FE G N+ G G+ + A +E + R R +G+ PR
| |
| Sbjct: 61 DMISSEVMKIWTEWFEANGEMPYFTNAQLGDGVKNLAKAVREAGRAVNLRRRDRGMLPRP 120
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| +RA++IG PNVGKS LINRL K+ + ++ RPG+T +WV++ E+ELLD PG++ +
| |
| Sbjct: 121 VRAVVIGFPNVGKSALINRLLKRKVVESARRPGVTKQLRWVRISDEIELLDAPGVIPSQI 180
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVA---VFGLRFLEEH-----YPERLKERYGLDEIPE 232
| |
| ++ ++LA+ I D+ + Q VA + L FLE LK RY L E
| |
| Sbjct: 181 KNREDAIKLAICEDIGDAAYDNQQVAASMIDFLTFLETDSNGFVSTSCLKYRYQL-EAHN 239
| |
|
| |
| Query: 233 DIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| E + + E + G + ++T+ I+ D R G++S E P
| |
| Sbjct: 240 YTGESY--LHELANQIYQG---DVERTSRRILDDFRKGFLGKISLELP 282
| |
|
| |
|
| |
| >ref|NP_212777.1| hypothetical protein BB0643 [Borrelia burgdorferi B31]
| |
| gb|AAC67000.1| conserved hypothetical protein [Borrelia burgdorferi B31]
| |
| Length = 279
| |
|
| |
| Score = 171 bits (434), Expect = 3e-041
| |
| Identities = 98/283 (34%), Positives = 171/283 (60%), Gaps = 19/283 (6%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHM +A + L+ +IV E++DAR P SS+NP+ E I KN+ +I+LL+K+D
| |
| Sbjct: 5 INWFPGHMKRALDLIKNNLQKANIVLEILDARAPFSSKNPLTEKITKNQAKIILLHKSDV 64
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLN-QIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| A +WK++FEN G ++ I+++ +G+ QI+ K++ K + K K + I
| |
| Sbjct: 65 AQINEIIKWKKYFENLG-NTVIISNIYKKGMRKQIIDIIKKLAIVK----KIKNYKEK-I 118
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| + LIIG+PNVGKS++IN L+ K AK ++PG T + Q VK+ +E+ L D PGILW
| |
| Sbjct: 119 KVLIIGVPNVGKSSIINLLSGKKSAKVANKPGYTKNIQIVKINEEINLFDMPGILWHNLV 178
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLD-----EIPEDIAE 236
| |
| D+ + +LA+ IK+ I++ D+A++ L ++++ L ++Y + +I ++ A+
| |
| Sbjct: 179 DQSIAKKLAILDMIKNEIVDNTDLALYLLEIMDQNNKNILLKKYEIYHKNSLDILQNFAK 238
| |
|
| |
| Query: 237 LFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| IG+K +N +K ++++I++ R KFG++ ++
| |
| Sbjct: 239 ARKLIGKKNE-------LNLEKASKILIKEFREGKFGKIILDK 274
| |
|
| |
|
| |
| >ref|NP_892315.1| hypothetical protein PMM0194 [Prochlorococcus marinus subsp.
| |
| pastoris str. CCMP1986]
| |
| emb|CAE18653.1| conserved hypothetical protein [Prochlorococcus marinus subsp.
| |
| pastoris str. CCMP1986]
| |
| Length = 288
| |
|
| |
| Score = 171 bits (434), Expect = 3e-041
| |
| Identities = 89/294 (30%), Positives = 164/294 (55%), Gaps = 28/294 (9%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++TE + +D+V E+ DARIP+S+ +P + ++NK I+++N+AD
| |
| Sbjct: 6 IQWYPGHIAKAEKKLTEVINRVDLVIEVRDARIPLSTGHPHLNQWIRNKKHILVINRADM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W + F+ I L ++ NG+G+ +I ++KE ++ ++G+K R IR
| |
| Sbjct: 66 ISTETITNWNKWFKKDNIYPLWCDAKNGKGIKEICKSAKESRLSIDNKRLSRGMKVRPIR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINR+AKK + ++ + G+T + +W+++ ++LLD PG++ P E+
| |
| Sbjct: 126 ALTLGFPNVGKSALINRIAKKKVVESARKAGVTRNLRWIRLDNGIDLLDAPGVIPPNLEN 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPE--------RLKERYGLDEIPE-- 232
| |
| + L LA+ I ++ ++ VA+ ++ + + + ++ +RYG+D +
| |
| Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIEFIKIIFKLKEDKNANISLSKISDRYGVDILKNFD 245
| |
|
| |
| Query: 233 ------DIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| D+ L G+KR + ++ D R + G++S E P
| |
| Sbjct: 246 NPHEWIDLVALKHTSGDKR------------RMAHKLLEDYRNQMLGKISLEVP 287
| |
|
| |
|
| |
| >ref|YP_001100802.1| putative GTPase [Herminiimonas arsenicoxydans]
| |
| emb|CAL62681.1| putative GTPase [Herminiimonas arsenicoxydans]
| |
| Length = 296
| |
|
| |
| Score = 170 bits (430), Expect = 9e-041
| |
| Identities = 92/263 (34%), Positives = 151/263 (57%), Gaps = 10/263 (3%)
| |
|
| |
| Query: 21 LKLIDIVYELVDARIPMSSRNPMIEDI--LKNKPRIMLLNKADKADAAVTQQWKEHFENQ 78
| |
| ++ +D++ E++DAR+P +S NPMIE++ + +P + +LNK+D AD A TQQW + + Q
| |
| Sbjct: 1 MEKVDMIIEVLDARVPQASCNPMIEELRTFRQRPCLKILNKSDLADPAATQQWLDFYNKQ 60
| |
|
| |
| Query: 79 -GIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLI 137
| |
| + +++++ + +I S +I R +KP +R +I+GIPNVGKSTL+
| |
| Sbjct: 61 KNVHAVALSCKKPSDVAKIPALSMKIAPH-----RGTALKP--LRIMIMGIPNVGKSTLM 113
| |
|
| |
| Query: 138 NRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKD 197
| |
| N L KK +AK GD P +T QQ + +G + L DTPG++WPK GL LA + AI
| |
| Sbjct: 114 NALLKKRVAKVGDEPAVTKMQQRLYLGNNIVLTDTPGMMWPKIAYPSDGLMLAASHAIGS 173
| |
|
| |
| Query: 198 SIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMSGGLINYD 257
| |
| + + ++VA F + YP + RYG+ D + + + +RG + GG ++ +
| |
| Sbjct: 174 NALIEEEVATFLADIILARYPALVAARYGMKTEGIDGVSVIEGVAVRRGLRIKGGELDLE 233
| |
|
| |
| Query: 258 KTTEVIIRDIRTEKFGRLSFEQP 280
| |
| K + ++D RT GR+S E P
| |
| Sbjct: 234 KAAHIFLQDYRTGLLGRISLETP 256
| |
|
| |
|
| |
| >ref|ZP_00109854.1| COG1161: Predicted GTPases [Nostoc punctiforme PCC 73102]
| |
| Length = 293
| |
|
| |
| Score = 169 bits (429), Expect = 1e-040
| |
| Identities = 96/286 (33%), Positives = 164/286 (57%), Gaps = 14/286 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ E+LK +D+V+E+ DARIP+++ +P I + ++ K R+++LN+ D
| |
| Sbjct: 12 IQWYPGHIAKAEKKLKEQLKRVDVVFEVRDARIPLATHHPQIGEWVEGKTRVLILNRVDM 71
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| + W + F+ QG N+ +G+G+ ++ A++ E R +G+ PR +R
| |
| Sbjct: 72 ITPQMRSLWIDWFKRQGEVPYFTNAQHGKGIAEVARAAQAAGVELNQRRSDRGMLPRPVR 131
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A++IG PNVGKS LINRL + + ++ RPG+T +WV++ + LELLD PG++ + ED
| |
| Sbjct: 132 AVVIGFPNVGKSALINRLLGRRVVESAARPGVTRQLRWVRISEHLELLDAPGVIPLRLED 191
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVA---VFGLRFLE----EHYPER-LKERYGLDEIPEDI 234
| |
| + L+LA+ I ++ + Q VA V +LE + P++ L+ RY LD +
| |
| Sbjct: 192 QDAALKLAICDDIGEASYDNQLVAAALVDLFNYLEAVTTDLLPKKPLQSRYQLDSTSDTG 251
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| A+ E R G + ++ ++ D R G +S E P
| |
| Sbjct: 252 DTYLHALAEHR---YKG---DVERAARQLLTDFRKGLLGEMSLELP 291
| |
|
| |
|
| |
| >ref|YP_382745.1| GTP-binding [Synechococcus sp. CC9605]
| |
| gb|ABB36190.1| GTP-binding [Synechococcus sp. CC9605]
| |
| Length = 288
| |
|
| |
| Score = 166 bits (421), Expect = 1e-039
| |
| Identities = 96/289 (33%), Positives = 164/289 (56%), Gaps = 16/289 (5%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQW+PGH+AKA +++ L +D+V E+ DARIP+++ +P + LK K ++++N+ D
| |
| Sbjct: 5 TIQWYPGHIAKAEQQLKRHLDKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| AA + W+ F+ QG +++ ++ G G+ Q+ A+ + +R R +G++PR +
| |
| Sbjct: 65 MVTAAAKEAWEAWFKAQGQKTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRPV 124
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RAL +G PNVGKS LINRL ++ + + R G+T + +WV++G++L+LLD PG+L P+ +
| |
| Sbjct: 125 RALTLGFPNVGKSALINRLVRQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGLDEIPE- 232
| |
| D+ LRLA+ I + + + VA L+ L + + L+ERYG+ E
| |
| Sbjct: 185 DQQAALRLALCDDIGQAAYDGELVAQAFLQLLLDVESQAAAGVTIPLLQERYGIPLSGET 244
| |
|
| |
| Query: 233 -DIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| D A DA + SG + + ++ D R G ++ E P
| |
| Sbjct: 245 ADPAFWLDAAAARH---TSG---ETARMAQRLLDDFRKSALGSIALELP 287
| |
|
| |
|
| |
| >ref|ZP_01471301.1| GTP-binding protein [Synechococcus sp. RS9916]
| |
| gb|EAU75096.1| GTP-binding protein [Synechococcus sp. RS9916]
| |
| Length = 292
| |
|
| |
| Score = 164 bits (416), Expect = 4e-039
| |
| Identities = 95/288 (32%), Positives = 162/288 (56%), Gaps = 16/288 (5%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ + L +D+V E+ DARIP+++ +P + +K K ++++N+ D
| |
| Sbjct: 6 IQWYPGHIAKAEQQLKQNLDKVDLVIEVRDARIPLATGHPHLNRWVKGKQHLLVINRRDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| A W++ F++QG ++ ++ G G+ Q+ A+ + +R R +G++PR +R
| |
| Sbjct: 66 VTAEARDAWQQWFKSQGQATVWCDAKAGTGVKQLQQAAIRAGNQLNERRRNRGMRPRPVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINRL K+ + + R G+T + +WV++G++L+LLD PG+L P+ +D
| |
| Sbjct: 126 ALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLE--EHYP------ERLKERYGLDEIPE-- 232
| |
| + L LA+ I + + + VA LR L E P R+++RYG+ E
| |
| Sbjct: 186 QRAALFLALCDDIGQAAYDGELVAQAFLRMLTAMEQRPGSGVSLGRVEKRYGIALTGETA 245
| |
|
| |
| Query: 233 DIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| D A A EK + + + ++ D R G +S E P
| |
| Sbjct: 246 DPALWMQAAAEKHTS------ADTSRMAQRLMDDFRKSALGSISLELP 287
| |
|
| |
|
| |
| >ref|NP_895932.1| hypothetical protein PMT2108 [Prochlorococcus marinus str. MIT
| |
| 9313]
| |
| emb|CAE22282.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
| |
| 9313]
| |
| Length = 296
| |
|
| |
| Score = 164 bits (416), Expect = 4e-039
| |
| Identities = 82/235 (34%), Positives = 144/235 (61%), Gaps = 8/235 (3%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQW+PGH+AKA +++++ L ID+V E+ DARIP+++ +P ++ +K K ++++N+ D
| |
| Sbjct: 12 TIQWYPGHIAKAEQQLSKNLDKIDLVIEVRDARIPIATAHPQLQRWIKGKQHLLVINRRD 71
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| +A Q W F +Q ++ G G+ Q+ A+ + R R++G++PR +
| |
| Sbjct: 72 MISSAARQSWDRWFRDQAQTPWWCDAKAGTGVKQVQQAAIRAGDQLNQRRRSRGMRPRPV 131
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RAL +G PNVGKS LINRL ++ + ++ R G+T + +WV++G++L+LLD PG+L P+ +
| |
| Sbjct: 132 RALTLGFPNVGKSALINRLVRQKVVESARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 191
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGLD 228
| |
| D+ L LA+ I + +++ VA+ L L + LK+RYG++
| |
| Sbjct: 192 DQQAALHLALCDDIGQAAYDVELVALALLETLTVLEKQAAAGVVAGILKQRYGIN 246
| |
|
| |
|
| |
| >ref|ZP_01469268.1| GTP-binding protein [Synechococcus sp. BL107]
| |
| gb|EAU71381.1| GTP-binding protein [Synechococcus sp. BL107]
| |
| Length = 292
| |
|
| |
| Score = 164 bits (415), Expect = 5e-039
| |
| Identities = 84/244 (34%), Positives = 146/244 (59%), Gaps = 8/244 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ L+ +D+V E+ DARIP+++ +P + LK K ++++N+ D
| |
| Sbjct: 6 IQWYPGHIAKAEQQLKRNLEKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W++ F+ +G R++ ++ G G+ Q+ A+ + +R R +G++PRA+R
| |
| Sbjct: 66 VTKEAWAAWEQWFKAKGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRAVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINRL KK + + R G+T + +WV++G++L+LLD PG+L P+ +D
| |
| Sbjct: 126 ALTLGFPNVGKSALINRLVKKKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGLDEIPEDI 234
| |
| + L LA+ I + N + VA L+ L + + L+ RYG+ + +
| |
| Sbjct: 186 QQAALHLALCDDIGQAAYNGELVAQAFLQLLIDSSERKASGVVLSVLETRYGIPVAGQTL 245
| |
|
| |
| Query: 235 AELF 238
| |
| L+
| |
| Sbjct: 246 DPLY 249
| |
|
| |
|
| |
| >ref|ZP_01125321.1| hypothetical protein WH7805_10578 [Synechococcus sp. WH 7805]
| |
| gb|EAR17360.1| hypothetical protein WH7805_10578 [Synechococcus sp. WH 7805]
| |
| Length = 289
| |
|
| |
| Score = 164 bits (415), Expect = 5e-039
| |
| Identities = 92/288 (31%), Positives = 162/288 (56%), Gaps = 16/288 (5%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ L +D+V E+ DARIP+++ +P + + K ++++N+ D
| |
| Sbjct: 6 IQWYPGHIAKAEQQLKRNLDKVDLVIEVRDARIPLATGHPHLNRWINGKQHLLVINRRDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| + W+ F+ +G R++ ++ G G+ Q+ A+ + +R R +G++PR +R
| |
| Sbjct: 66 VTSEARVAWEAWFKARGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRPVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINRL K+ + + R G+T + +WV++G++L+LLD PG+L P+ +D
| |
| Sbjct: 126 ALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYG--LDEIPE 232
| |
| + L LA+ I + + + VA L L+ P+ L+ RYG L+ E
| |
| Sbjct: 186 QQAALHLALCDDIGQAAYDGELVAQAFLNLLKGLQPQEASGVGLALLESRYGVPLEGATE 245
| |
|
| |
| Query: 233 DIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| D A +A+ E+ SG + + + ++ D R G ++ E P
| |
| Sbjct: 246 DPAYWLEAVAERH---TSG---DTARMAQRLLDDFRKSALGSIALELP 287
| |
|
| |
|
| |
| >ref|YP_001018794.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9303]
| |
| gb|ABM79529.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9303]
| |
| Length = 289
| |
|
| |
| Score = 163 bits (413), Expect = 8e-039
| |
| Identities = 81/235 (34%), Positives = 144/235 (61%), Gaps = 8/235 (3%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQW+PGH+AKA +++++ L ID+V E+ DARIP+++ +P ++ +K K ++++N+ D
| |
| Sbjct: 5 TIQWYPGHIAKAEQQLSKNLDKIDLVIEVRDARIPIATAHPQLQRWIKGKQHLLVINRRD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| +A Q W F +Q ++ G G+ Q+ A+ + R R++G++PR +
| |
| Sbjct: 65 MISSAARQSWDRWFRDQAQTPWWCDAKAGTGVKQVQQAAIRAGDQLNQRRRSRGMRPRPV 124
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RAL +G PNVGKS LINRL ++ + ++ R G+T + +WV++G++L+LLD PG+L P+ +
| |
| Sbjct: 125 RALTLGFPNVGKSALINRLVRQKVVESARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLD 184
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGLD 228
| |
| D+ L LA+ I + +++ VA+ L L + L++RYG++
| |
| Sbjct: 185 DQQAALHLALCDDIGQAAYDVELVALALLETLSVLEKQAAAGVVAGVLEQRYGIN 239
| |
|
| |
|
| |
| >ref|YP_731895.1| GTPase family protein [Synechococcus sp. CC9311]
| |
| gb|ABI45436.1| GTPase family protein [Synechococcus sp. CC9311]
| |
| Length = 292
| |
|
| |
| Score = 163 bits (413), Expect = 8e-039
| |
| Identities = 79/211 (37%), Positives = 134/211 (63%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ L +D+V E+ DARIP+++ +P + LK K ++++N+ D
| |
| Sbjct: 6 IQWYPGHIAKAEQQLKRNLDKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| A + W + F+ QG R++ ++ G G+ Q+ A+ + +R + +G++PRA+R
| |
| Sbjct: 66 VTTAAWEAWDQWFKAQGQRTVWCDAKAGTGVKQVQQAAIRAGNQLNERRKNRGMRPRAVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINRL KK + + R G+T + +WV++G++L+LLD PG+L P+ +D
| |
| Sbjct: 126 ALTLGFPNVGKSALINRLVKKKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
| |
| + L LA+ I + + + VA L+ L
| |
| Sbjct: 186 QKAALHLALCDDIGQAAYDGELVAQAFLQLL 216
| |
|
| |
|
| |
| >ref|YP_378143.1| GTP-binding [Synechococcus sp. CC9902]
| |
| gb|ABB27100.1| GTP-binding [Synechococcus sp. CC9902]
| |
| Length = 292
| |
|
| |
| Score = 163 bits (412), Expect = 1e-038
| |
| Identities = 79/211 (37%), Positives = 134/211 (63%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ L+ +D+V E+ DARIP+++ +P + LK K ++++N+ D
| |
| Sbjct: 6 IQWYPGHIAKAEQQLKRNLEKVDLVIEVRDARIPLATGHPHLNRWLKGKQHLLVINRRDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W++ F+ +G R++ ++ G G+ Q+ A+ + +R R +G++PRA+R
| |
| Sbjct: 66 VTKEAWAAWEQWFKAKGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRAVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINRL KK + + R G+T + +WV++G++L+LLD PG+L P+ +D
| |
| Sbjct: 126 ALTLGFPNVGKSALINRLVKKKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFL 213
| |
| + L LA+ I + N + VA L+ L
| |
| Sbjct: 186 QQAALHLALCDDIGQAAYNGELVAQAFLQLL 216
| |
|
| |
|
| |
| >gb|AAT86009.1| putative GTPase YlqF [Vibrio harveyi]
| |
| Length = 208
| |
|
| |
| Score = 162 bits (411), Expect = 1e-038
| |
| Identities = 75/162 (46%), Positives = 111/162 (68%)
| |
|
| |
| Query: 121 IRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKF 180
| |
| IR +I+GIPNVGKST+IN LA + IA TG++P +T QQ + + + L DTPGILWPK
| |
| Sbjct: 12 IRTMIMGIPNVGKSTIINALAGRTIAVTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKV 71
| |
|
| |
| Query: 181 EDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDA 240
| |
| E+ G RLA TGA+KD+ + +VA + + +L HYPE+LKERY +DE+PE E+ +
| |
| Sbjct: 72 ENPHSGFRLAATGAVKDTAMEYDEVAFYTVEYLAAHYPEKLKERYQIDELPESDIEIMEE 131
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| IG +RG L +GG ++ K +E+++ ++R G+++ E P M
| |
| Sbjct: 132 IGRRRGALRAGGRVDLHKVSEILLHELRQGTLGQITLELPEM 173
| |
|
| |
|
| |
| >ref|NP_898416.1| hypothetical protein SYNW2327 [Synechococcus sp. WH 8102]
| |
| emb|CAE08842.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
| |
| Length = 288
| |
|
| |
| Score = 162 bits (410), Expect = 2e-038
| |
| Identities = 81/233 (34%), Positives = 144/233 (61%), Gaps = 8/233 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA ++++ L +D+V E+ DARIP+++ +P ++ LK K ++++N+ D
| |
| Sbjct: 6 IQWYPGHIAKAEQQLSRHLDKVDLVIEVRDARIPLATGHPHLDRWLKGKQHLLVINRRDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| A + W+ F+ +G R++ ++ G G+ Q+ A+ + +R R +G++PR +R
| |
| Sbjct: 66 VTPAAREAWEAWFKGRGQRTVWCDAKAGTGVKQVQQAAIRAGDQLNERRRNRGMRPRPVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINRL K+ + + R G+T + +WV++G++L+LLD PG+L P+ +D
| |
| Sbjct: 126 ALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGL 227
| |
| + L LA+ I + + + VA L+ L + ++ L+ RYG+
| |
| Sbjct: 186 QQAALHLALCDDIGQAAYDGELVAQAFLQLLIDLQQQQASGVAIPVLESRYGI 238
| |
|
| |
|
| |
| >ref|ZP_01481649.1| hypothetical protein VchoR_02002454 [Vibrio cholerae RC385]
| |
| Length = 194
| |
|
| |
| Score = 162 bits (409), Expect = 2e-038
| |
| Identities = 75/159 (47%), Positives = 111/159 (69%)
| |
|
| |
| Query: 124 LIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDE 183
| |
| +I+GIPNVGKST+IN LA + IA+TG++P +T QQ + + + L DTPGILWPK E+
| |
| Sbjct: 1 MIMGIPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKVENP 60
| |
|
| |
| Query: 184 LVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGE 243
| |
| G RLA TGA+KD+ + +VA + + +L +HYPERLKERY +DE+PE EL + IG
| |
| Sbjct: 61 HSGFRLAATGAVKDTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPETDVELMEEIGR 120
| |
|
| |
| Query: 244 KRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM 282
| |
| KRG L +G ++ K +E+++ ++R G+++ E+P M
| |
| Sbjct: 121 KRGALRAGARVDLHKASEILLHELRQGVLGQITLERPEM 159
| |
|
| |
|
| |
| >ref|ZP_01083651.1| hypothetical protein WH5701_05155 [Synechococcus sp. WH 5701]
| |
| gb|EAQ76632.1| hypothetical protein WH5701_05155 [Synechococcus sp. WH 5701]
| |
| Length = 303
| |
|
| |
| Score = 161 bits (408), Expect = 3e-038
| |
| Identities = 80/212 (37%), Positives = 132/212 (62%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA R++ +L +D+V E+ DARIP ++ +P ++ +K KPR++++N+ D
| |
| Sbjct: 19 IQWYPGHIAKAERQLFTQLAKVDLVIEVRDARIPRATGHPRLQRWMKAKPRLLVINRRDM 78
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| + A Q W +G ++ G G+ Q+ A+ + R +G++PR +R
| |
| Sbjct: 79 INEAARQAWDHWLRKRGETPWWCDAKVGTGVKQLQEAAIRAGSQLNARRAGRGMRPRPVR 138
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL++G PNVGKS LINRL ++ + + R G+T + +WV++G+EL+LLD PG+L P+ +D
| |
| Sbjct: 139 ALMLGFPNVGKSALINRLVRQKVVDSARRAGVTRTLRWVRLGQELDLLDAPGVLPPRLDD 198
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLE 214
| |
| + L LA+ I + + + VAV LR LE
| |
| Sbjct: 199 QRAALLLALCDDIGQAAYDGEAVAVAFLRLLE 230
| |
|
| |
|
| |
| >ref|YP_001010539.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9515]
| |
| gb|ABM71432.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9515]
| |
| Length = 288
| |
|
| |
| Score = 161 bits (407), Expect = 4e-038
| |
| Identities = 87/295 (29%), Positives = 160/295 (54%), Gaps = 28/295 (9%)
| |
|
| |
| Query: 2 TIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKAD 61
| |
| TIQW+PGH+AKA ++++ + +D++ E+ DARIP+S+ +P + + NK I+++N+AD
| |
| Sbjct: 5 TIQWYPGHIAKAEKKLSAVISRVDLIIEVRDARIPLSTGHPHLNQWITNKKHILVINRAD 64
| |
|
| |
| Query: 62 KADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| W F+ I L ++ NG+G+ +I ++KE R ++G+K R I
| |
| Sbjct: 65 MIAPETIINWNTWFKKYDIYPLWCDAKNGKGIKEICKSAKESRLSIDKRRLSRGMKVRPI 124
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RAL +G PNVGKS LINR+AKK + ++ + G+T + +W+++ ++LLD PG++ P E
| |
| Sbjct: 125 RALTLGFPNVGKSALINRIAKKKVVESARKAGVTRNLRWIRLDGGIDLLDAPGVIPPNLE 184
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPE--------RLKERYGLDEIPE- 232
| |
| ++ L LA+ I ++ ++ VA+ L+ + + + ++ RYG+D +
| |
| Sbjct: 185 NQKSALNLALCDDIGEAAYEIESVAIEFLKIIFKLKEDKNANISLKKISNRYGVDILKSF 244
| |
|
| |
| Query: 233 -------DIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| D+ L G++R + ++ D R + G+++ E P
| |
| Sbjct: 245 DSPHEWIDLVALKHTSGDRR------------RMAYKLLEDYRNQMLGKIALEVP 287
| |
|
| |
|
| |
| >ref|YP_001008607.1| Predicted GTPases [Prochlorococcus marinus str. AS9601]
| |
| gb|ABM69500.1| Predicted GTPases [Prochlorococcus marinus str. AS9601]
| |
| Length = 290
| |
|
| |
| Score = 160 bits (404), Expect = 9e-038
| |
| Identities = 86/286 (30%), Positives = 158/286 (55%), Gaps = 12/286 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA ++++E + +D+V E+ DARIP+S+ +P + + NK I+++N++D
| |
| Sbjct: 6 IQWYPGHIAKAEKKLSEVINKVDLVIEVRDARIPLSTGHPHLNKWINNKKHILVINRSDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W + F ++ L ++ G G+ +I ++K+ DR ++G++ R IR
| |
| Sbjct: 66 ISPNTINSWNKWFNSKDQYPLWCDAKRGIGIKEICKSAKDSRSSIDDRRLSRGMRIRPIR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINR+AKK + + + G+T + +W+K+ ++LLD PG++ P ED
| |
| Sbjct: 126 ALTLGFPNVGKSALINRIAKKRVVDSARKAGVTRNLRWIKLESGIDLLDAPGVIPPNLED 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGLDEIPEDI 234
| |
| + L LA+ I ++ ++ VA+ ++ + ++ + RYG+D I +
| |
| Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIGFIKIISTLNKDKNANISVKQISNRYGVD-ITKGF 244
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I E SG + + + ++ D R + G+++ E P
| |
| Sbjct: 245 KSPSAWIDEAASKHTSG---DKRRMSHKLLEDYRNQMLGKIALEVP 287
| |
|
| |
|
| |
| >ref|NP_441269.1| hypothetical protein slr0267 [Synechocystis sp. PCC 6803]
| |
| dbj|BAA17949.1| slr0267 [Synechocystis sp. PCC 6803]
| |
| Length = 279
| |
|
| |
| Score = 160 bits (404), Expect = 9e-038
| |
| Identities = 79/224 (35%), Positives = 138/224 (61%), Gaps = 1/224 (0%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA R++ E+L +D+V E++DARIP++S++P + + KP++++LN+ D
| |
| Sbjct: 4 IQWYPGHIAKAERQLREQLNKVDVVLEVIDARIPLASQHPDVPLWVGEKPKLIILNRVDM 63
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| + +QW F Q N+ G G+ I A+++ + +R + +G++PR +R
| |
| Sbjct: 64 ITPELQEQWLTWFRQQNQTVYYANAKQGTGVKAISKAAQQAGKAVNERRQRRGMQPRPVR 123
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| A+++G PNVGKS LINRL + + ++ R G+T +W+++ LELLD+PG++ K E+
| |
| Sbjct: 124 AVVMGFPNVGKSALINRLLGRKVVESARRAGVTRQLRWIRISDSLELLDSPGVIPLKLEN 183
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGL-RFLEEHYPERLKERY 225
| |
| + L+LA+ I ++ Q VA+ + L+ E L +RY
| |
| Sbjct: 184 QANALKLAICEDIGEAAYENQAVAIAMVDLLLDLSLGEALTQRY 227
| |
|
| |
|
| |
| >ref|YP_001090438.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9301]
| |
| gb|ABO16837.1| Predicted GTPase [Prochlorococcus marinus str. MIT 9301]
| |
| Length = 290
| |
|
| |
| Score = 159 bits (403), Expect = 1e-037
| |
| Identities = 86/286 (30%), Positives = 157/286 (54%), Gaps = 12/286 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA ++++E + +D+V E+ DARIP+S+ +P + + NK I+++N++D
| |
| Sbjct: 6 IQWYPGHIAKAEKKLSEVINKVDLVIEVRDARIPLSTGHPHLNKWINNKKHILVINRSDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W + F + L ++ G G+ +I ++K+ DR ++G++ R IR
| |
| Sbjct: 66 VSPHTINSWNKWFNAKDQYPLWCDAKRGIGIKEICKSAKDSRSSIDDRRLSRGMRIRPIR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINR+AKK + + + G+T + +W+K+ ++LLD PG++ P ED
| |
| Sbjct: 126 ALTLGFPNVGKSALINRIAKKRVVDSARKAGVTRNLRWIKLESGIDLLDAPGVIPPNLED 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGLDEIPEDI 234
| |
| + L LA+ I ++ ++ VA+ ++ + ++ + RYG+D I +
| |
| Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIEFIKIISTLNKDKNANISAKQISNRYGVD-ITKGF 244
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I E SG + + + ++ D R + G+++ E P
| |
| Sbjct: 245 KSPSAWINEAASKHTSG---DTRRMSHKLLEDYRNQMLGKIALEVP 287
| |
|
| |
|
| |
| >ref|ZP_01079386.1| hypothetical protein RS9917_06730 [Synechococcus sp. RS9917]
| |
| gb|EAQ70511.1| hypothetical protein RS9917_06730 [Synechococcus sp. RS9917]
| |
| Length = 288
| |
|
| |
| Score = 159 bits (401), Expect = 2e-037
| |
| Identities = 81/233 (34%), Positives = 138/233 (59%), Gaps = 8/233 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA +++ L +D+V E+ DARIP ++ +P + + K ++++N+ D
| |
| Sbjct: 6 IQWYPGHIAKAEQQLRRHLDKVDLVIEVRDARIPRATGHPHLNRWINGKQHLLVINRRDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| A W++ F+ QG ++ ++ G G+ Q+ A+ + +R R +G++PRA+R
| |
| Sbjct: 66 VTAEARDAWQQWFKGQGQSTVWCDAKAGTGVKQLQQAAIRAGDQLNERRRNRGMRPRAVR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINRL K+ + + R G+T + +WV++G++L+LLD PG+L P+ +D
| |
| Sbjct: 126 ALTLGFPNVGKSALINRLVKQKVVASARRAGVTRTLRWVRLGQDLDLLDAPGVLPPRLDD 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPER--------LKERYGL 227
| |
| + L LA+ I + + + A LR L P + L+ RYG+
| |
| Sbjct: 186 QRAALHLALCDDIGQAAYDGEWAAQSFLRLLAVLEPRQGSGVSLPLLETRYGI 238
| |
|
| |
|
| |
| >ref|YP_396694.1| hypothetical protein PMT9312_0196 [Prochlorococcus marinus str. MIT
| |
| 9312]
| |
| gb|ABB49258.1| hypothetical protein PMT9312_0196 [Prochlorococcus marinus str. MIT
| |
| 9312]
| |
| Length = 290
| |
|
| |
| Score = 158 bits (399), Expect = 4e-037
| |
| Identities = 86/286 (30%), Positives = 156/286 (54%), Gaps = 12/286 (4%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| IQW+PGH+AKA ++++E + +D+V E+ DARIP+S+ +P + + NK I+++N++D
| |
| Sbjct: 6 IQWYPGHIAKAEKKLSEIINKVDLVIEVRDARIPLSTGHPHLNKWINNKKHILVINRSDM 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| W F + L ++ G G+ +I ++K+ DR ++G++ R IR
| |
| Sbjct: 66 ISHNTINSWNNWFNAKDQYPLWCDAKRGIGIKEICKSAKDSRSSIDDRRLSRGMRIRPIR 125
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| AL +G PNVGKS LINR+AKK + + + G+T + +W+K+ ++LLD PG++ P ED
| |
| Sbjct: 126 ALTLGFPNVGKSALINRIAKKRVVDSARKAGVTRNLRWIKLDSGIDLLDAPGVIPPNLED 185
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPE--------RLKERYGLDEIPEDI 234
| |
| + L LA+ I ++ ++ VA+ ++ + + ++ RYG+D I +
| |
| Sbjct: 186 QKSALNLALCDDIGEAAYEIESVAIEFIKIISTLNKDKNANISVKKISNRYGVD-ITKGF 244
| |
|
| |
| Query: 235 AELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQP 280
| |
| I E SG + + + ++ D R + G+++ E P
| |
| Sbjct: 245 KSPSAWIDEAASKHTSG---DKRRMSHKLLEDYRNQMLGKIALEVP 287
| |
|
| |
|
| |
| >ref|YP_073086.1| conserved hypothetical GTP-binding protein [Borrelia garinii PBi]
| |
| gb|AAU07494.1| conserved hypothetical GTP-binding protein [Borrelia garinii PBi]
| |
| Length = 268
| |
|
| |
| Score = 157 bits (398), Expect = 5e-037
| |
| Identities = 89/271 (32%), Positives = 164/271 (60%), Gaps = 9/271 (3%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQ 69
| |
| M +A + L+ +IV E++DAR P SS+NP+ E I+KN+ +I+LL+K+D A A
| |
| Sbjct: 1 MKRALDLIKNNLEKTNIVLEILDARAPFSSKNPLTEKIIKNQTKIILLHKSDIAQIAEII 60
| |
|
| |
| Query: 70 QWKEHFENQGIRSLSINSVNGQGLN-QIVPASKEILQEKFDRMRAKGVKPRAIRALIIGI 128
| |
| +WK++FEN G ++ I+++ +G+ QI+ K++ K + K K + I+ LIIG+
| |
| Sbjct: 61 KWKKYFENLG-NTVIISNIYKKGMRKQIIDNIKKLAIVK----KIKNYKEK-IKVLIIGV 114
| |
|
| |
| Query: 129 PNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLR 188
| |
| PNVGKS++IN L+ K AK ++PG T + Q VK+ +E+ L D PGILW D+ + +
| |
| Sbjct: 115 PNVGKSSIINLLSGKKSAKVANKPGYTKNIQIVKINEEINLFDMPGILWHNLADQSIAKK 174
| |
|
| |
| Query: 189 LAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCL 248
| |
| LA+ IK+ I++ D+A++ L ++++ L ++Y + ++ ++ + R +
| |
| Sbjct: 175 LAILDMIKNEIVDNIDLALYLLEIMDQNNKNILLKKYEI--YHKNSLDILQNFAKARKLI 232
| |
|
| |
| Query: 249 MSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| +N +K ++++I++ R KFG++ ++
| |
| Sbjct: 233 HKKNELNLEKASKILIKEFREGKFGKIILDK 263
| |
|
| |
|
| |
| >ref|NP_326137.1| GTP-BINDING PROTEIN [Mycoplasma pulmonis UAB CTIP]
| |
| emb|CAC13479.1| GTP-BINDING PROTEIN [Mycoplasma pulmonis]
| |
| Length = 291
| |
|
| |
| Score = 157 bits (398), Expect = 5e-037
| |
| Identities = 93/271 (34%), Positives = 143/271 (52%), Gaps = 5/271 (1%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHMAK RE+ EK + D+ L+D R P+S N + I NKPR+ + +K D
| |
| Sbjct: 18 INWFPGHMAKGMREIEEKAVVADLFVILLDVRAPLSCYNKSFDKIAPNKPRLFVFSKIDL 77
| |
|
| |
| Query: 63 ADAAVTQQWKEHF-ENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| D + KEHF N+ + + ++ Q I+ +L+EK + + KG+ +
| |
| Sbjct: 78 GDKDKYNKIKEHFGSNKNV--VFVDLKKPQSRQIILKKIDYLLKEKVLQEQKKGLNKPRL 135
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| R ++G+PN GKST IN L K+ K G+ PGIT QQW+KV L LLDTPGILWP +
| |
| Sbjct: 136 RVFVLGVPNTGKSTFINLLLKEKKVKVGNMPGITRGQQWIKVDNIL-LLDTPGILWPNLD 194
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED-IAELFDA 240
| |
| D+ V ++L++ G+I+ II + + + ++YPE L E+ I E
| |
| Sbjct: 195 DQDVAIKLSIIGSIRSEIIPSDFLFKNTYKIISKNYPEILTNMNLFSSNDENKIHENLLK 254
| |
|
| |
| Query: 241 IGEKRGCLMSGGLINYDKTTEVIIRDIRTEK 271
| |
| I E++ + G + ++ + I+ K
| |
| Sbjct: 255 IAEQKNMFIKNGEYDLERARKWFYNFIKNSK 285
| |
|
| |
|
| |
| >ref|YP_015816.1| putative GTP-binding protein [Mycoplasma mobile 163K]
| |
| gb|AAT27605.1| putative GTP-binding protein [Mycoplasma mobile 163K]
| |
| Length = 277
| |
|
| |
| Score = 156 bits (395), Expect = 1e-036
| |
| Identities = 91/258 (35%), Positives = 146/258 (56%), Gaps = 4/258 (1%)
| |
|
| |
| Query: 4 QWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKA 63
| |
| QWFPGHMAKA R++ EK K +D ++D+R P+S+ N + I KPR+ ++NK D
| |
| Sbjct: 3 QWFPGHMAKALRQIKEKEKFVDFFIIVLDSRAPISTYNKEFDKISPKKPRLFIINKIDYG 62
| |
|
| |
| Query: 64 DAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRA 123
| |
| D Q+ + +F + L N + I+ + ++L +K + + +G+
| |
| Sbjct: 63 DVKKYQKLERYFRTENSDVLFTNLKKQNTRSIIIKSVDKLLFKKTEYDKKRGLLNPFTVG 122
| |
|
| |
| Query: 124 LIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDE 183
| |
| +I+G+PN GKSTLIN LA K+ K + PG+T QQ V + + +L DTPGIL+PK E E
| |
| Sbjct: 123 MILGLPNTGKSTLINLLANKSKTKVANTPGVTRGQQLV-ITERFKLFDTPGILFPKIEYE 181
| |
|
| |
| Query: 184 LVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPED--IAELFDAI 241
| |
| L +++A+ G+IK IIN +++ + L E+YPE + E+ GL +D I + I
| |
| Sbjct: 182 LDAIKIAMIGSIKWEIINQKELFFGSYKLLSEYYPEEI-EKLGLQPSFDDNQIFISLEQI 240
| |
|
| |
| Query: 242 GEKRGCLMSGGLINYDKT 259
| |
| G+K + I+ ++T
| |
| Sbjct: 241 GKKHNFYLKDKQIDENRT 258
| |
|
| |
|
| |
| >ref|NP_110345.1| similar to GTP-binding protein [Mycoplasma pneumoniae M129]
| |
| sp|P75135|Y656_MYCPN Hypothetical protein MG442 homolog (K05_orf271)
| |
| gb|AAB95834.1| GTP-binding protein [Mycoplasma pneumoniae M129]
| |
| Length = 271
| |
|
| |
| Score = 156 bits (395), Expect = 1e-036
| |
| Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 16/276 (5%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHM K ++ + +D V E+VDAR P ++NP I NKP++ L KAD
| |
| Sbjct: 10 INWFPGHMKKTHDQLKKLASSLDGVIEVVDARAPTLTQNPEITAYFTNKPKLTLALKADL 69
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| A QG++ + ++ + + Q K ++++AKG+ R
| |
| Sbjct: 70 AQTVANSNILWGTLKQGLQLKRL----------VIKKLQTLFQAKKNQLKAKGLLVHQFR 119
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| +IG+PNVGKS+LIN L KN + +R G+T S W ++ E L DTPG+ + + ++
| |
| Sbjct: 120 LAVIGMPNVGKSSLINLLLNKNHLQVANRAGVTKSMSWNQISSEFYLSDTPGVFFKRIDE 179
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| VG +L +T IK ++ L+DV F +L +HYP+ L D E
| |
| Sbjct: 180 MAVGYKLVLTNVIKREVVPLEDVGAFAFCYLSKHYPQLLPYE------GTDFTEFLHKFA 233
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| R L +N + E+ + ++ K+G+LSFE
| |
| Sbjct: 234 ISRKLLQKSNQLNINLACELFVSELINGKYGKLSFE 269
| |
|
| |
|
| |
| >ref|YP_710094.1| hypothetical protein BAPKO_0687 [Borrelia afzelii PKo]
| |
| gb|ABH01918.1| hypothetical protein BAPKO_0687 [Borrelia afzelii PKo]
| |
| Length = 268
| |
|
| |
| Score = 155 bits (393), Expect = 2e-036
| |
| Identities = 88/271 (32%), Positives = 163/271 (60%), Gaps = 9/271 (3%)
| |
|
| |
| Query: 10 MAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAVTQ 69
| |
| M +A + L+ +IV E++DAR P SS+NP+ E I+KN+ +I+LL+K+D A A
| |
| Sbjct: 1 MKRALDLIKNNLEKTNIVLEILDARAPFSSKNPLTEKIIKNQTKIILLHKSDIAQIAEII 60
| |
|
| |
| Query: 70 QWKEHFENQGIRSLSINSVNGQGLN-QIVPASKEILQEKFDRMRAKGVKPRAIRALIIGI 128
| |
| +WK++FEN G ++ I+++ +G+ QI+ K++ K + K K + I+ LIIG+
| |
| Sbjct: 61 KWKKYFENLG-NTVIISNIYKKGMRKQIIDNIKKLAIVK----KIKNYKEK-IKVLIIGV 114
| |
|
| |
| Query: 129 PNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLR 188
| |
| PNVGKS++IN L+ K AK ++PG T + Q VK+ +E+ L D PGILW D+ + +
| |
| Sbjct: 115 PNVGKSSIINLLSGKKSAKVANKPGYTKNIQIVKINEEINLFDMPGILWHNLVDQSIAKK 174
| |
|
| |
| Query: 189 LAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCL 248
| |
| LA+ IK+ I++ D+A++ L ++++ L ++Y + ++ ++ + R +
| |
| Sbjct: 175 LAILDMIKNEIVDNTDLALYLLEIMDQNNKNILLKKYEI--YHKNSLDILQNFAKARKLI 232
| |
|
| |
| Query: 249 MSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| ++ +K +++I++ R KFG++ ++
| |
| Sbjct: 233 HKKNELDIEKAAKILIKEFREGKFGKIILDK 263
| |
|
| |
|
| |
| >gb|AAL31697.1| GTPase [Mycoplasma gallisepticum]
| |
| Length = 274
| |
|
| |
| Score = 155 bits (392), Expect = 2e-036
| |
| Identities = 89/277 (32%), Positives = 151/277 (54%), Gaps = 9/277 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHM K ++ + K ID+V +++DAR + NP + +I K K I + K+D
| |
| Sbjct: 6 INWFPGHMKKTLDDINKIKKHIDLVIQVLDARAINLTSNPDLLEIFKQKKIINVALKSDL 65
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD ++ Q+ ++ N + Q N ++ +IL +K R++AKG+
| |
| Sbjct: 66 AD--LSYQYDPE-------TIVTNIRDHQFSNFLLNKLHQILSDKIKRLQAKGLVTPHFN 116
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| ++IG+PN+GKS+LIN+L KKN K ++ G+T Q +VK+ K L DTPG+L+ + +D
| |
| Sbjct: 117 IMVIGLPNIGKSSLINKLIKKNHNKVENKAGVTKRQTFVKLNKNFTLYDTPGVLYKRIDD 176
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| ++G +L++ I +I +Q+V F +L +HY +L E + IPE E +
| |
| Sbjct: 177 FILGAKLSLLNVINLEVIPMQEVLSFAYSYLNQHYHNQLLEWAKQEIIPEQFHEFIEQYA 236
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| K+G L I+ + T +DI K ++++E+
| |
| Sbjct: 237 HKKGFLNKNNAIDLNATYMNFYQDISLAKIAKVNYEK 273
| |
|
| |
|
| |
| >gb|AAY83879.1| GTPase-like protein [Bos taurus]
| |
| gb|AAY83883.1| GTPase-like protein [Bos taurus]
| |
| Length = 332
| |
|
| |
| Score = 155 bits (391), Expect = 3e-036
| |
| Identities = 89/250 (35%), Positives = 141/250 (56%), Gaps = 12/250 (4%)
| |
|
| |
| Query: 4 QWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKA 63
| |
| +WFPGHMAK +++ L+L+D + E+ DARIP+S RNP+ ++ L KP +++LNK D A
| |
| Sbjct: 29 RWFPGHMAKGLKKMQSSLRLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLA 88
| |
|
| |
| Query: 64 DAAVTQQWKEHFENQGIRSLSI-NSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| D Q+ +H E +GI+ + N V + + Q++P E++ + R + V+
| |
| Sbjct: 89 DLKEQQKIIQHLEREGIKHVVFTNCVKDENVKQVIPTVTELVGSSYRYHRGEHVE---YC 145
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAK-----TGDRPGIT---TSQQWVKVGKELELLDTPG 174
| |
| ++IG+PNVGKS+LIN L ++++ K G PGIT S+ V + LLDTPG
| |
| Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPG 205
| |
|
| |
| Query: 175 ILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI 234
| |
| +L P+ GL+LA+ G + D ++ + +A F L L H + YGL E +DI
| |
| Sbjct: 206 VLAPRIPSVETGLKLALCGTVLDHLVGEETLADFLLYTLNRHQLSGYVQHYGLGEACDDI 265
| |
|
| |
| Query: 235 AELFDAIGEK 244
| |
| A + + K
| |
| Sbjct: 266 ASVLKRVAVK 275
| |
|
| |
|
| |
| >ref|NP_001020498.2| GTPase-like protein [Bos taurus]
| |
| sp|Q4PS77|MTG1_BOVIN Mitochondrial GTPase 1, mitochondrial precursor
| |
| gb|AAI03283.1| GTPase-like protein [Bos taurus]
| |
| Length = 332
| |
|
| |
| Score = 153 bits (387), Expect = 9e-036
| |
| Identities = 88/250 (35%), Positives = 141/250 (56%), Gaps = 12/250 (4%)
| |
|
| |
| Query: 4 QWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKA 63
| |
| +WFPGHMAK +++ L+L+D + E+ DA+IP+S RNP+ ++ L KP +++LNK D A
| |
| Sbjct: 29 RWFPGHMAKGLKKMQSSLRLVDCIIEVHDAQIPLSGRNPLFQETLGLKPHLLVLNKMDLA 88
| |
|
| |
| Query: 64 DAAVTQQWKEHFENQGIRSLSI-NSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| D Q+ +H E +GI+ + N V + + Q++P E++ + R + V+
| |
| Sbjct: 89 DLKEQQKIIQHLEREGIKHVVFTNCVKDENVKQVIPTVTELVGSSYRYHRGEHVE---YC 145
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAK-----TGDRPGIT---TSQQWVKVGKELELLDTPG 174
| |
| ++IG+PNVGKS+LIN L ++++ K G PGIT S+ V + LLDTPG
| |
| Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSRIQVCERPLMFLLDTPG 205
| |
|
| |
| Query: 175 ILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI 234
| |
| +L P+ GL+LA+ G + D ++ + +A F L L H + YGL E +DI
| |
| Sbjct: 206 VLAPRIPSVETGLKLALCGTVLDHLVGEETLADFLLYTLNRHQLSGYVQHYGLGEACDDI 265
| |
|
| |
| Query: 235 AELFDAIGEK 244
| |
| A + + K
| |
| Sbjct: 266 ASVLKRVAVK 275
| |
|
| |
|
| |
| >gb|AAH26039.1| Mitochondrial GTPase 1 homolog (S. cerevisiae) [Homo sapiens]
| |
| Length = 334
| |
|
| |
| Score = 153 bits (387), Expect = 9e-036
| |
| Identities = 86/252 (34%), Positives = 143/252 (56%), Gaps = 12/252 (4%)
| |
|
| |
| Query: 4 QWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKA 63
| |
| +WFPGHMAK +++ LKL+D + E+ DARIP+S RNP+ ++ L KP +++LNK D A
| |
| Sbjct: 29 RWFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLA 88
| |
|
| |
| Query: 64 DAAVTQQWKEHFENQGIRS-LSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| D Q+ +H E +G+++ + N V + + QI+P E++ R + ++
| |
| Sbjct: 89 DLTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRKENLE---YC 145
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAK-----TGDRPGIT---TSQQWVKVGKELELLDTPG 174
| |
| ++IG+PNVGKS+LIN L ++++ K G PGIT S+ V + LLDTPG
| |
| Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPG 205
| |
|
| |
| Query: 175 ILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI 234
| |
| +L P+ E GL+LA+ G + D ++ + +A + L L +H + YGL +++
| |
| Sbjct: 206 VLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLNKHQRFGYVQHYGLGSACDNV 265
| |
|
| |
| Query: 235 AELFDAIGEKRG 246
| |
| + ++ K G
| |
| Sbjct: 266 ERVLKSVAVKLG 277
| |
|
| |
|
| |
| >gb|AAH04409.1| MTG1 protein [Homo sapiens]
| |
| Length = 355
| |
|
| |
| Score = 153 bits (387), Expect = 9e-036
| |
| Identities = 86/252 (34%), Positives = 143/252 (56%), Gaps = 12/252 (4%)
| |
|
| |
| Query: 4 QWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKA 63
| |
| +WFPGHMAK +++ LKL+D + E+ DARIP+S RNP+ ++ L KP +++LNK D A
| |
| Sbjct: 50 RWFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLA 109
| |
|
| |
| Query: 64 DAAVTQQWKEHFENQGIRS-LSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| D Q+ +H E +G+++ + N V + + QI+P E++ R + ++
| |
| Sbjct: 110 DLTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRKENLE---YC 166
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAK-----TGDRPGIT---TSQQWVKVGKELELLDTPG 174
| |
| ++IG+PNVGKS+LIN L ++++ K G PGIT S+ V + LLDTPG
| |
| Sbjct: 167 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPG 226
| |
|
| |
| Query: 175 ILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI 234
| |
| +L P+ E GL+LA+ G + D ++ + +A + L L +H + YGL +++
| |
| Sbjct: 227 VLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLNKHQRFGYVQHYGLGSACDNV 286
| |
|
| |
| Query: 235 AELFDAIGEKRG 246
| |
| + ++ K G
| |
| Sbjct: 287 ERVLKSVAVKLG 298
| |
|
| |
|
| |
| >ref|NP_612393.2| GTP_binding protein [Homo sapiens]
| |
| sp|Q9BT17|MTG1_HUMAN Mitochondrial GTPase 1, mitochondrial precursor (GTP-binding
| |
| protein 7)
| |
| emb|CAH70046.1| novel protein [Homo sapiens]
| |
| emb|CAH70289.1| novel protein [Homo sapiens]
| |
| Length = 334
| |
|
| |
| Score = 153 bits (387), Expect = 9e-036
| |
| Identities = 86/252 (34%), Positives = 143/252 (56%), Gaps = 12/252 (4%)
| |
|
| |
| Query: 4 QWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKA 63
| |
| +WFPGHMAK +++ LKL+D + E+ DARIP+S RNP+ ++ L KP +++LNK D A
| |
| Sbjct: 29 RWFPGHMAKGLKKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETLGLKPHLLVLNKMDLA 88
| |
|
| |
| Query: 64 DAAVTQQWKEHFENQGIRS-LSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| D Q+ +H E +G+++ + N V + + QI+P E++ R + ++
| |
| Sbjct: 89 DLTEQQKIMQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRKENLE---YC 145
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAK-----TGDRPGIT---TSQQWVKVGKELELLDTPG 174
| |
| ++IG+PNVGKS+LIN L ++++ K G PGIT S+ V + LLDTPG
| |
| Sbjct: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPG 205
| |
|
| |
| Query: 175 ILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI 234
| |
| +L P+ E GL+LA+ G + D ++ + +A + L L +H + YGL +++
| |
| Sbjct: 206 VLAPRIESVETGLKLALCGTVLDHLVGEETMADYLLYTLNKHQRFGYVQHYGLGSACDNV 265
| |
|
| |
| Query: 235 AELFDAIGEKRG 246
| |
| + ++ K G
| |
| Sbjct: 266 ERVLKSVAVKLG 277
| |
|
| |
|
| |
| >ref|NP_853404.1| ATP/GTP-binding protein [Mycoplasma gallisepticum R]
| |
| gb|AAP56972.1| ATP/GTP-binding protein [Mycoplasma gallisepticum R]
| |
| Length = 278
| |
|
| |
| Score = 153 bits (386), Expect = 1e-035
| |
| Identities = 88/277 (31%), Positives = 151/277 (54%), Gaps = 9/277 (3%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHM K ++ + K ID+V +++DAR + NP + +I K K I + K+D
| |
| Sbjct: 10 INWFPGHMKKTLDDINKIKKHIDLVIQVLDARAINLTSNPDLLEIFKQKKIINVALKSDL 69
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| AD ++ Q+ ++ N + Q N ++ +IL +K R++AKG+
| |
| Sbjct: 70 AD--LSYQYDPE-------TIVTNIRDHQFSNFLLNKLHQILSDKIKRLQAKGLVTPHFN 120
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFED 182
| |
| ++IG+PN+GKS+LIN+L KKN K ++ G+T Q +VK+ K L DTPG+L+ + +D
| |
| Sbjct: 121 IMVIGLPNIGKSSLINKLIKKNHNKVENKAGVTKRQTFVKLNKNFTLYDTPGVLYKRIDD 180
| |
|
| |
| Query: 183 ELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIG 242
| |
| ++G +L++ I +I +Q+V F +L ++Y +L E + IPE E +
| |
| Sbjct: 181 FILGAKLSLLNVINLEVIPMQEVLSFAYSYLNQYYHNQLLEWAKQEIIPEQFHEFIEQYA 240
| |
|
| |
| Query: 243 EKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQ 279
| |
| K+G L I+ + T +DI K ++++E+
| |
| Sbjct: 241 HKKGFLNKNNAIDLNATYMNFYQDISLAKIAKVNYEK 277
| |
|
| |
|
| |
| >ref|XP_001056954.1| PREDICTED: similar to GTP binding protein 7 (putative) isoform 3
| |
| [Rattus norvegicus]
| |
| ref|XP_001057183.1| PREDICTED: similar to GTP binding protein 7 (putative) [Rattus
| |
| norvegicus]
| |
| Length = 326
| |
|
| |
| Score = 150 bits (378), Expect = 1e-034
| |
| Identities = 98/289 (33%), Positives = 157/289 (54%), Gaps = 20/289 (6%)
| |
|
| |
| Query: 4 QWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKA 63
| |
| +WFPGHMAK +++ LKL+D V E+ DARIP S RNP+ +++L KP +++LNK D A
| |
| Sbjct: 28 RWFPGHMAKGLKKMQSSLKLVDCVIEVHDARIPFSGRNPLFQELLGLKPHLLVLNKMDLA 87
| |
|
| |
| Query: 64 DAAVTQQWKEHFENQGIRS-LSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| D Q+ +H E +G+R+ + N + + + QI+P E++ + RA+ +
| |
| Sbjct: 88 DLTEQQKIVQHLEEKGLRNVIFTNCIKDENIKQIIPKVTELIGCSYRYHRAENPE---YC 144
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNI-----AKTGDRPGIT---TSQQWVKVGKELELLDTPG 174
| |
| +++G+PNVGKS+LIN L ++++ A+ G PGIT TS+ V + LLDTPG
| |
| Sbjct: 145 IMVVGVPNVGKSSLINSLRRQHLRTGKAARVGGEPGITRAVTSRIQVCERPLMFLLDTPG 204
| |
|
| |
| Query: 175 ILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI 234
| |
| +L P+ + GL+LA+ G + D ++ + +A + L L H + Y L + I
| |
| Sbjct: 205 VLAPRIQSVETGLKLALCGTVLDHLVGEETMADYLLYTLNRHGLFGYVQHYALASASDHI 264
| |
|
| |
| Query: 235 AELFDAIGEKRG------CLMSGGLINYDKTTEVI-IRD-IRTEKFGRL 275
| |
| + + K G L G +N + I RD +RT + GRL
| |
| Sbjct: 265 EWVLKNVAIKLGKTRKVKVLTGTGNVNVIQPDYAIAARDFLRTFRSGRL 313
| |
|
| |
|
| |
| >ref|XP_001416772.1| predicted protein [Ostreococcus lucimarinus CCE9901]
| |
| gb|ABO95065.1| predicted protein [Ostreococcus lucimarinus CCE9901]
| |
| Length = 369
| |
|
| |
| Score = 147 bits (371), Expect = 6e-034
| |
| Identities = 73/197 (37%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| +QW+PGH+A+A R + +LK +D V E+ DAR+P+++ +P I +K RI++LN+AD
| |
| Sbjct: 85 VQWYPGHIARAERLLKAQLKGVDAVLEVRDARLPLATSHPEIASWCGDKMRIVVLNRADM 144
| |
|
| |
| Query: 63 ADAAVTQQWKEHFENQG-IRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAI 121
| |
| +W H + +G R + ++ G+G ++ + E+ +E + AKG+ PR +
| |
| Sbjct: 145 VSDGERARWVSHLKREGETRVVLTDARAGKGTRRVKEMAMEMSEEINAKRAAKGLLPRPV 204
| |
|
| |
| Query: 122 RALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFE 181
| |
| RA ++G PNVGKS LINRL K + RPG+T +WV++G +L+LLD PG+L +
| |
| Sbjct: 205 RAAVVGYPNVGKSALINRLVGKAACASAPRPGVTRDLRWVRIGGDLDLLDAPGVLPARMH 264
| |
|
| |
| Query: 182 DELVGLRLAVTGAIKDS 198
| |
| D+ RLA+ I ++
| |
| Sbjct: 265 DQRAASRLAMANDIGEA 281
| |
|
| |
|
| |
| >ref|NP_073112.1| GTP-binding conserved hypothetical protein [Mycoplasma genitalium
| |
| G37]
| |
| sp|Q49435|Y442_MYCGE Hypothetical protein MG442
| |
| gb|AAC72462.1| GTP-binding conserved hypothetical protein [Mycoplasma genitalium
| |
| G37]
| |
| Length = 270
| |
|
| |
| Score = 146 bits (368), Expect = 1e-033
| |
| Identities = 82/281 (29%), Positives = 141/281 (50%), Gaps = 26/281 (9%)
| |
|
| |
| Query: 3 IQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADK 62
| |
| I WFPGHM K ++ + ID + E+VDAR P + N I NKP+++L K D
| |
| Sbjct: 9 INWFPGHMKKIHDQLKKLSSQIDGIIEIVDARAPTLTHNSEIISYFLNKPKLILALKTDL 68
| |
|
| |
| Query: 63 ADAAVTQQ-----WKEHFENQGIRSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVK 117
| |
| A ++ KE F+ + +++ + K +++AKG+
| |
| Sbjct: 69 AQYKPNKKILFGSLKEPFKLK---------------KKVLKTLTTLFANKRQQLKAKGLL 113
| |
|
| |
| Query: 118 PRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRPGITTSQQWVKVGKELELLDTPGILW 177
| |
| + R +IG+PNVGKS+LIN L KN K +R GIT S W+++ EL L DTPG+
| |
| Sbjct: 114 IKQFRLAVIGMPNVGKSSLINLLINKNHLKVANRAGITKSLNWIQISPELLLSDTPGVFL 173
| |
|
| |
| Query: 178 PKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAEL 237
| |
| + ++ +G +L +T I+ ++N+++V +F +L++HY + L +
| |
| Sbjct: 174 KRIDEIQIGYKLVLTNVIRREVVNIEEVGMFAFNYLKKHYKQLLPFE------ADSFINF 227
| |
|
| |
| Query: 238 FDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFE 278
| |
| + + RG + +N + E+ I ++ K+G+LS+E
| |
| Sbjct: 228 LEKFAKVRGLIKKANELNTNLACEIFINELINGKYGKLSYE 268
| |
|
| |
|
| |
| >ref|XP_001378257.1| PREDICTED: similar to GTPase-like protein [Monodelphis domestica]
| |
| Length = 410
| |
|
| |
| Score = 144 bits (364), Expect = 4e-033
| |
| Identities = 94/295 (31%), Positives = 152/295 (51%), Gaps = 23/295 (7%)
| |
|
| |
| Query: 4 QWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKA 63
| |
| +WFPGHMAK +++ LKL+D + E+ ARIP+S RNP+ ++ L KP +++LNK D A
| |
| Sbjct: 104 RWFPGHMAKGLKKMQSSLKLVDCIIEMQVARIPLSGRNPLFQETLGIKPHLLVLNKMDLA 163
| |
|
| |
| Query: 64 DAAVTQQWKEHFENQGIRS-LSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIR 122
| |
| D Q+ +G+++ + N + + + QIVP ++++ + R + ++
| |
| Sbjct: 164 DLKEKQKIVGCLNKKGVKNVIFTNCIKDENIKQIVPMVTKLIESGYRYHRGENLE---YC 220
| |
|
| |
| Query: 123 ALIIGIPNVGKSTLINRLAKKNIAK-----TGDRPGIT---TSQQWVKVGKELELLDTPG 174
| |
| ++IG+PNVGKS+LIN L ++++ K G PG+T S+ V + LLDTPG
| |
| Sbjct: 221 IMVIGVPNVGKSSLINSLRRQHLKKGKASPVGGHPGVTKAVMSRVQVCERPLMFLLDTPG 280
| |
|
| |
| Query: 175 ILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDI 234
| |
| +L P+ +D GL+LA G I D ++ +A + L L + R E Y L E +DI
| |
| Sbjct: 281 VLTPRIQDVETGLKLATCGTILDHLVGEDIIADYLLFTLNKQQQFRYVEHYDLGEACDDI 340
| |
|
| |
| Query: 235 AELFDAIG------EKRGCLMSGGLIN-----YDKTTEVIIRDIRTEKFGRLSFE 278
| |
| + I K L G +N Y IR R+ G++ F+
| |
| Sbjct: 341 GSVLKKIAIKLKKINKVKVLTGTGDVNVIQPDYTAAAYDFIRSFRSGVLGQVMFD 395
| |
|
| |
|
| |
| Database: nr
| |
| Posted date: Apr 27, 2007 3:04 PM
| |
| Number of letters in database: 1,686,729,293
| |
| Number of sequences in database: 4,878,246
| |
|
| |
| Lambda K H
| |
| 0.319 0.138 0.396
| |
|
| |
| Gapped
| |
| Lambda K H
| |
| 0.267 0.0410 0.140
| |
|
| |
|
| |
| Matrix: BLOSUM62
| |
| Gap Penalties: Existence: 11, Extension: 1
| |
| Number of Sequences: 4878246
| |
| Number of Hits to DB: 903,228,070
| |
| Number of extensions: 36645632
| |
| Number of successful extensions: 131799
| |
| Number of sequences better than 10.0: 4382
| |
| Number of HSP's gapped: 132865
| |
| Number of HSP's successfully gapped: 5096
| |
| Length of query: 282
| |
| Length of database: 1,686,729,293
| |
| Length adjustment: 130
| |
| Effective length of query: 152
| |
| Effective length of database: 1,052,557,313
| |
| Effective search space: 159988711576
| |
| Effective search space used: 159988711576
| |
| Neighboring words threshold: 11
| |
| Window for multiple hits: 40
| |
| X1: 16 ( 7.4 bits)
| |
| X2: 38 (14.6 bits)
| |
| X3: 64 (24.7 bits)
| |
| S1: 41 (21.7 bits)
| |
| S2: 77 (34.3 bits)
| |
