Chromosome 1 open reading frame 41 Evolution: Difference between revisions
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The sequence | The sequence of platypus was removed due to poor alignment. Besides that, the sequence for urchin_156 and g.alga_fap were removed as they were subsequence of urchin_159 and g.alga_itp25 respectively. | ||
[[ | [[]] | ||
== Phylogenetic Tree == | == Phylogenetic Tree == | ||
Revision as of 01:01, 7 June 2009
Blast
The above shows the result from BLASTP search. The sequences of these proteins are aligned to observe the conserved regions.
ClustalX
Multiple sequence alignment with all of the 27 sequences obtained from BLAST is shown below:
The sequence of platypus was removed due to poor alignment. Besides that, the sequence for urchin_156 and g.alga_fap were removed as they were subsequence of urchin_159 and g.alga_itp25 respectively.
[[]]
Phylogenetic Tree
After obtaining the multiple sequence alignment, phylogenetic tree was construct based on the result from multiple sequence alignment.
