Chromosome 1 open reading frame 41 Evolution: Difference between revisions

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== BLAST ==
[[Image:BLAST.png|centre|framed|'''Figure 1:''' BLAST result]]


[[Image:BLAST.png]]


The above shows the result from BLASTP search. The sequences of these proteins are aligned to observe the conserved regions.
H-(2x)-W-(29x)-R-(2x)-S-(2x)-E residues critical for galactose binding site




== CLUSTALX ==
[[Image:Msa16.png|centre|framed|'''Figure 2:''' Conserved region of alpha B domain.]]


[[Image:MSA.png]]


[[Image:Msa17.png|centre|framed|'''Figure 3:''' Residues involved in binding of Ca2+ and possible binding site.]]


== Phylogenetic Tree ==
 
[[Image:Tree.png]]
[[Image:Treecolour.png|centre|framed|'''Figure 4:''' Phylogenetic tree of c1orf41 with its homologues. Red is marine eukaryote, blue is amphibian and green is terrestrial eukaryotes.]]
 
 
[[Image:Tree.png|centre|framed|'''Figure 5:''' Phylogenetic tree with bootstrap values]]
 
 
[[Chromosome 1 open reading frame 41 Function|Next]]

Latest revision as of 06:26, 16 June 2009

Figure 1: BLAST result


H-(2x)-W-(29x)-R-(2x)-S-(2x)-E residues critical for galactose binding site


Figure 2: Conserved region of alpha B domain.


Figure 3: Residues involved in binding of Ca2+ and possible binding site.


Figure 4: Phylogenetic tree of c1orf41 with its homologues. Red is marine eukaryote, blue is amphibian and green is terrestrial eukaryotes.


Figure 5: Phylogenetic tree with bootstrap values


Next