Chromosome 1 open reading frame 41 Evolution

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Blast

BLAST.png

The above shows the result from BLASTP search. The sequences of these proteins are aligned to observe the conserved regions.

ClustalX

Multiple sequence alignment with all of the 27 sequences obtained from BLAST is shown below:


Platypus.png


The sequence of platypus was removed due to poor alignment. Besides that, the sequence for urchin_156 and g.alga_fap were removed as they were subsequence of urchin_159 and g.alga_itp25 respectively.


BLAST10.png

Phylogenetic Tree

After obtaining the multiple sequence alignment, phylogenetic tree was construct based on the result from multiple sequence alignment. Bootstrap values are shown on each branch.

Tree final.png