Conclusion ERp18: Difference between revisions

From MDWiki
Jump to navigationJump to search
No edit summary
No edit summary
Line 1: Line 1:
The results of the structural analysis confirm cysteines 66 & 69 as being the catalytic residues of the ERp18 protein. High degree of conservation around this thioredoxin motif (66-CGAC-69), as well as results of bioinformatics programs such as... supports this hypothesis.
Structural analysis supported ERp18's classification as a thioredoxin protein. 3D modelling identified a catalytic site pertaining to an area of high evolutionary conservation. This catalytic site contained a CXXC residue motif - ubiquitous of all thioredoxin proteins. Furthermore, binding pockets were identified at the catalytic site by several bioinformatics programs. A DALI search identified numerous thioredoxin and thioredoxin-like proteins as being structurally similar, supporting the classification of ERp18 as a thioredoxin. Furthermore, information about the conformation and folding of ERp18 identified a thioredoxin fold. Recent literature has identified ERp18 as a dimer with a single protein molecular weight of 16.4 kDa, leading to the renaming of ERp18 as ERp16.
Structural analysis supported ERp18's classification as a thioredoxin protein. 3D modelling identified a catalytic site pertaining to an area of high evolutionary conservation. This catalytic site contained a CXXC residue motif - ubiquitous of all thioredoxin proteins. Furthermore, binding pockets were identified at the catalytic site by several bioinformatics programs. A DALI search identified numerous thioredoxin and thioredoxin-like proteins as being structurally similar, supporting the classification of ERp18 as a thioredoxin. Furthermore, information about the conformation and folding of ERp18 identified a thioredoxin fold. Recent literature has identified ERp18 as a dimer with a single protein molecular weight of 16.4 kDa, leading to the renaming of ERp18 as ERp16.

Revision as of 09:59, 14 June 2009

Structural analysis supported ERp18's classification as a thioredoxin protein. 3D modelling identified a catalytic site pertaining to an area of high evolutionary conservation. This catalytic site contained a CXXC residue motif - ubiquitous of all thioredoxin proteins. Furthermore, binding pockets were identified at the catalytic site by several bioinformatics programs. A DALI search identified numerous thioredoxin and thioredoxin-like proteins as being structurally similar, supporting the classification of ERp18 as a thioredoxin. Furthermore, information about the conformation and folding of ERp18 identified a thioredoxin fold. Recent literature has identified ERp18 as a dimer with a single protein molecular weight of 16.4 kDa, leading to the renaming of ERp18 as ERp16.