Dali output

FSSP FAMILIES OF STRUCTURALLY SIMILAR PROTEINS, VERSION 1.0 (Apr 1 1995) CREATED Tue May 15 06:16:53 BST 2007 for dali on s041-007.ebi.ac.uk METHOD Dali ver. 2.0: Holm, L., Sander, C. (1993) J.Mol.Biol. 233,123-138 DATABASE 9005 protein chains PDBID 3367-A HEADER COMPND SOURCE AUTHOR SEQLENGTH 261 NALIGN 364 WARNING pairs with Z<2.0 are structurally dissimilar

1. 1. SUMMARY: PDB/chain identifiers and structural alignment statistics

 NR. STRID1 STRID2  Z   RMSD LALI LSEQ2 %IDE REVERS PERMUT NFRAG TOPO PROTEIN
  1: 3367-A 1puj-A 42.7  0.0  261   261  100      0      0     1 S    SIGNALING PROTEIN 	conserved hypothetical protein ylqf 
  2: 3367-A 1u0l-A 12.2  3.4  133   278   20      0      0    13 S    HYDROLASE 	probable gtpase engc 	(thermotoga maritima) 
  3: 3367-A 1ctq-A  5.5  2.6   95   166   13      0      0     6 S    SIGNALING PROTEIN 	transforming protein p21H-RAS-1 frag
  4: 3367-A 1ejj-A  5.3  5.8  159   508    9      0      0    24 S     ISOMERASE 	phosphoglycerate mutase 	(bacillus stearoth
  5: 3367-A 1gpm-A  5.2  4.0  117   501    8      0      0    16 S    TRANSFERASE (GLUTAMINE AMIDOTRANSFERASE) 	gmp synthetas
  6: 3367-A 1efc-A  5.2  3.5  103   386   11      0      0     7 S    RNA BINDING PROTEIN 	elongation factor (eftu) biologica
  7: 3367-A 1hrk-A  5.1  4.2  116   359    5      0      0    17 S     LYASE 	ferrochelatase fragment (protoheme ferro-lyase,
  8: 3367-A 1ni5-A  5.0  4.1  115   428    4      0      0    14 S    CELL CYCLE 	putative cell cycle protein mesj 	(escheric
  9: 3367-A 1dpg-A  5.0  3.3  108   485    6      0      0    11 S    OXIDOREDUCTASE (CHOH(D) - NAD(P)) 	glucose 6-phosphate