Elizabeth Skippington: Difference between revisions

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Price MN, Dehal PS, Arkin AP:  '''Horizontal gene transfer and the evolution of transcriptional regulation in Escherichia coli.''' Genome Biol 2008, 9(1):R4 [http://genomebiology.com/content/pdf/gb-2008-9-1-r4.pdf]
Price MN, Dehal PS, Arkin AP:  '''Horizontal gene transfer and the evolution of transcriptional regulation in Escherichia coli.''' Genome Biol 2008, 9(1):R4 [http://genomebiology.com/content/pdf/gb-2008-9-1-r4.pdf]


===LGT and metabolic networks===
===LGT and metabolic networks===
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Eisenberg E, Levanon EY: '''Preferential attachment in the protein network evolution.''' Phys Rev Lett 2003, 91(13):138701 [http://prola.aps.org/pdf/PRL/v91/i13/e138701]
Eisenberg E, Levanon EY: '''Preferential attachment in the protein network evolution.''' Phys Rev Lett 2003, 91(13):138701 [http://prola.aps.org/pdf/PRL/v91/i13/e138701]
===Transfer of operons===
Homma K, Fukuchi S, Nakamura Y, Gojobori T, Nishikawa K: Gene Cluster Analysis Method Identifies Horizontally Transferred Genes with High Reliability and Indicates that They Provide the Main Mechanism of Operon Gain in 8 Species of {gamma}-Proteobacteria. Molecular Biology and Evolution 2007 24(3):805-813 [http://mbe.oxfordjournals.org/cgi/reprint/24/3/805]

Revision as of 05:39, 3 April 2008

PIC Server [1]


Literature

Davids W, Zhang Z: The impact of horizontal gene tranfer in shaping operons and protein interaction networks- direct evidence of preferential attachment. BMC Evoutionary Biology 2008, 8:23 [2]

Wellner A and Lurie MN: Complexity, connectivity, and duplicability as barriers to lateral gene transfer. Genome Biology 2007, 8:R156 [3]


LGT and regulatory networks

Lercher MJ, and Pál C: Integration of Horizontally Transferred Genes into Regulatory Interaction Networks Takes Many Million Years. Molecular Biology and Evolution 2008, 25(3):559-567 [4]

Price MN, Dehal PS, Arkin AP: Horizontal gene transfer and the evolution of transcriptional regulation in Escherichia coli. Genome Biol 2008, 9(1):R4 [5]


LGT and metabolic networks

Eisenberg E, Levanon EY: Preferential attachment in the protein network evolution. Phys Rev Lett 2003, 91(13):138701 [6]


Transfer of operons

Homma K, Fukuchi S, Nakamura Y, Gojobori T, Nishikawa K: Gene Cluster Analysis Method Identifies Horizontally Transferred Genes with High Reliability and Indicates that They Provide the Main Mechanism of Operon Gain in 8 Species of {gamma}-Proteobacteria. Molecular Biology and Evolution 2007 24(3):805-813 [7]