Evolutionary Tree: Difference between revisions
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[[command BLAST]] | [[command BLAST]] | ||
[http://compbio.chemistry.uq.edu.au/mediawiki/index.php/Image:Cladogram view.JPG | ---- | ||
[http://compbio.chemistry.uq.edu.au/mediawiki/index.php/Image:Cladogram view.JPG Cladogram view] | |||
In detecting evolunationary tree, BLAST was used to searching homologous sequence. In addition, Clustal X was used to align the sequence specifically by using multiple alignment method. Phylogenetic analysis was conducted using treeview program follows with editing the tree to adding the boostrap value. | In detecting evolunationary tree, BLAST was used to searching homologous sequence. In addition, Clustal X was used to align the sequence specifically by using multiple alignment method. Phylogenetic analysis was conducted using treeview program follows with editing the tree to adding the boostrap value. | ||
Revision as of 00:49, 2 June 2007
In detecting evolunationary tree, BLAST was used to searching homologous sequence. In addition, Clustal X was used to align the sequence specifically by using multiple alignment method. Phylogenetic analysis was conducted using treeview program follows with editing the tree to adding the boostrap value.
- star signs means boostrap value more than 75% (morethan 75% confidence in branching tree)
