Fascin: Difference between revisions
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== Fascin Evolution == | |||
Blast Results show that fascin 1 is very highly conserved throughout the Eukarya Domain providing 112 hits all with excellent E value and High scores | |||
[[Image:Flascin_1.jpg]] | [[Image:Flascin_1.jpg]] | ||
From a possible 100 FASTA sequences, were cut down to 31. The process of elimination was conducted by the deletion of sequences with too many bp before and after the sample sequence, followed by the deletion of sequences with large segments of gaps in conserved and variable regions of the sequence alignment. Fascin domains were found via a protDOM search and compared to the remaining sequences. | |||
[[Image:Fascin_multiple_alignment.jpg]] | |||
Neighbor-method with Bootstrap values (1 = 100) Results were run at 500 replications | |||
[[Image:Fascin_bootstrap_500rep.jpg]] | |||
Latest revision as of 03:02, 9 June 2009
Fascin Evolution
Blast Results show that fascin 1 is very highly conserved throughout the Eukarya Domain providing 112 hits all with excellent E value and High scores
From a possible 100 FASTA sequences, were cut down to 31. The process of elimination was conducted by the deletion of sequences with too many bp before and after the sample sequence, followed by the deletion of sequences with large segments of gaps in conserved and variable regions of the sequence alignment. Fascin domains were found via a protDOM search and compared to the remaining sequences.
Neighbor-method with Bootstrap values (1 = 100) Results were run at 500 replications
