Function for haloacid dehalogenase-like hydrolase domain containing 2: Difference between revisions

From MDWiki
Jump to navigationJump to search
No edit summary
No edit summary
Line 3: Line 3:
Where's does this name come from? We look at it's name.
Where's does this name come from? We look at it's name.


Hydolase indicates it's main function or process.
Hydolase indicates it's main molecular function, hydrolase activity.


And, Domain containing 2 illustrate it has 2 domains
[http://www.rcsb.org/pdb/explore/sequence.do?structureId=2HO4 / Sequence and Secondary Structure]


[[Image:Sequence_and_secondary_structure.png]]




Line 27: Line 30:
[http://www.rcsb.org/pdb/explore/biologyAndChemistry.do?structureId=2HO4 / PBD Biology and Chemistry Report]
[http://www.rcsb.org/pdb/explore/biologyAndChemistry.do?structureId=2HO4 / PBD Biology and Chemistry Report]


[http://www.rcsb.org/pdb/explore/sequence.do?structureId=2HO4 / Sequence and Secondary Structure]
 
[[Image:Sequence_and_secondary_structure.png]]


<pre>
<pre>

Revision as of 02:21, 5 June 2007

Haloacid dehalogenase-like hydrolase domain containing 2 (2HO4:A,B)

Where's does this name come from? We look at it's name.

Hydolase indicates it's main molecular function, hydrolase activity.

And, Domain containing 2 illustrate it has 2 domains / Sequence and Secondary Structure

Sequence and secondary structure.png




Ligands and Prosthetic Groups

ID, Name Chemical, Formula, Weight Ligand, Ligand Structure

PO4, Phosphate Ion, O4 P 3-, 94.971, / View PO4 400.gif

MG, Magnesium Ion, Mg 2+, 24.305, / View MG 400.gif

MSE, Selenomethionine, C5 H11 N O2 Se, 196.107, / View MSE 400.gif

/ PBD Biology and Chemistry Report


CDS             1..259
                /gene="HDHD2"
                /coded_by="NM_032124.4:134..913"
                /GO_function="hydrolase activity"
                /GO_process="metabolism"
                /db_xref="CCDS:CCDS32829.1"
                /db_xref="GeneID:84064"
                /db_xref="HGNC:25364"
                /db_xref="HPRD:13640"

GO_function:/ hydrolase activity

GO_process:/ metabolic process

Gene Detail:/ Hdhd2

FASTA of HDHD2 of haloacid dehalogenase-like hydrolase domain containing 2 Homo sapiens

COExpresson of Predict Functional Protein:/ HDHD2 haloacid dehalogenase-like hydrolase domain containing 2 HDHD2 and predicted functional partner.png

ProFunc Result:/ 2ho4

HDHD2 (259 aa) (Homo sapiens) is highly conservatity to Pan troglodytes, Macaca mulatta, Rattus norvegicus, Mus musculus species.

Predicted Functional Partners: KIAA0423 annotation not available (1723 aa)

/ ProKnow

/ Gene Ontology Classifications

/ PDB sum

/ Mammalian Orthology Proteins

http://symatlas.gnf.org/SymAtlas/symquery?q=212508