Functional analysis of 2ece

FUNCTIONAL analysis of SELENBP 1 (pdb 2ece)

The red coloured region is the region carrying Se, and it is evident that the Se is incorporated in an amino acid of the helix chain.(Pymol Image)

DaliLite: Structural Neighbours

Query: mol1A MOLECULE: 462AA LONG HYPOTHETICAL SELENIUM-BINDING PROTEIN;

Matches are sorted by Z-score. Similarities with a Z-score lower than 2 are spurious.

Summary

   No:  |Chain|   Z|    rmsd| lali| nres|  %id|  Description

  1:    |2ece-A |80.1  |0.0  |455   |455  |100   |MOLECULE: 462AA LONG HYPOTHETICAL SELENIUM-BINDING PROTEIN;          
  2:    |1ri6-A |32.6  |2.6  |314   |333  | 12   |MOLECULE: PUTATIVE ISOMERASE YBHE;                                   
  3:    |1jof-A |31.3  |2.9  |329   |365  |10   |MOLECULE: CARBOXY-CIS,CIS-MUCONATE CYCLASE;                          
  4:    |1l0q-C |30.3  |2.2  |286   |391  | 15   |MOLECULE: SURFACE LAYER PROTEIN;                                     
  5:    |1l0q-B |30.3  |2.2  |286   |391  | 15   |MOLECULE: SURFACE LAYER PROTEIN;                                     
  6:    |1l0q-A |30.3  |2.2  |286   |391  | 15   |MOLECULE: SURFACE LAYER PROTEIN;                                     
  7:    |1l0q-D |30.2  |2.2  |286   |391  | 15   |MOLECULE: SURFACE LAYER PROTEIN;                                     
  8:    |1qni-D |28.3  |2.8  |317   |572  | 11   |MOLECULE: NITROUS-OXIDE REDUCTASE;                                   
  9:    |1qni-F |28.0  |2.8  |317   |572  | 11   |MOLECULE: NITROUS-OXIDE REDUCTASE;                                   
 10:    |1fwx-D |28.0   |2.8  |316   |588  | 10   |MOLECULE: NITROUS OXIDE REDUCTASE;                                   
 11:    |1fwx-A |27.9  |2.9  |318   |591   |10   |MOLECULE: NITROUS OXIDE REDUCTASE;  
 21:    |1sq9-A |25.0  |3.0  |293   |378   |10   |MOLECULE: ANTIVIRAL PROTEIN SKI8; 
 23:    |2z2o-C |24.5  |2.6  |269   |299   |10   |MOLECULE: VIRGINIAMYCIN B LYASE;
 25:    |1yfq-A |24.4  |3.1  |287   |342   |11   |MOLECULE: CELL CYCLE ARREST PROTEIN BUB3;
 42:    |1pev-A |23.5  |2.9  |282   |610   | 9   |MOLECULE: ACTIN INTERACTING PROTEIN 1;
 159:   |1bpo-B |13.6  |4.1  |261   |493   | 8   |MOLECULE: CLATHRIN;
 277:   |1a12-B |9.3  |3.9  |235   |401    |8   |MOLECULE: REGULATOR OF CHROMOSOME CONDENSATION 1;

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