Lychee sytem

ssh Hostbased Authentication

In order to make queue transfer data from and to cluster nodes (mango*) smoothly, ssh host based Authentication must be correctly setup.

• /etc/ssh/sshd_config on servers (actually everynodes & lychee) must have the following lines:

  AllowUsers root *@mango* *@lychee*

  HostbasedAuthentication yes
  IgnoreUserKnownHosts yes

• /etc/ssh/ssh_config on clients (mango* & lychee) must have:

  Host *
       HostbasedAuthentication yes
       EnableSSHKeysign yes

• /etc/ssh/ssh_known_hosts2 stores protocol 2 ssh public keys, which can be obtained by:

  ssh-keyscan -vt rsa mango02 >> /etc/ssh/ssh_known_host2

Different entries can share the same key, as long as the host machines use the same ssh_host_rsa_key key pairs(recommended).

• /etc/hosts.equiv stores all the possible hostname one in a line like

   mango01
   192.168.0.3
   mango02
   192.168.0.4
   ....
   lychee
   lychee.md.smms.uq.edu.au
   192.168.1.249
   ...

• restart sshd server and it should work.

see also:

http://www.snailbook.com/faq/trusted-host-howto.auto.html

https://www.cs.uwaterloo.ca/twiki/view/CF/SSHHostBasedAuthentication

http://docs.hp.com/en/5992-4213/ch04s06.html

Torque PBS qsub wrapper

Using a wrapper of qsub will be helpful in case that some rules/restrains to the jobs are difficult to be added by qmgr.

To use a filter, add the this to /var/spool/PBS/torque.cfg .

   SUBMITFILTER /path/to/your/wrapper

The wrapper will read lines, which is content of the job script, from STDIN, analyze it, and output the modified version to STDOUT. Useful information can be displayed by writing to STDERR as well.