Pfam: Difference between revisions
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* E value = 1e-25 | * E value = 1e-25 | ||
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[[The predicted function based on the evolution and structure|Previous page]] | |||
Revision as of 23:15, 10 June 2007
Pfam
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Hydrolase: domain 1 of 1, from 18 to 224: score 96.2, E = 1e-25 *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl.........lplee
++av+FD+D+TL+d+ + + ++ + e+ ++l + + +++ ++ +
query 18 VRAVFFDLDNTLIDT-AGASRRGMLEVIKLLQSkyhykeeaeIICDK 63
vekllgrgl.g.erilleggltaell...................d.evl
v l +++ ++ ++ t ++ + +++++ ++++ ++ ++
query 64 VQVKLSKECfHpYSTCITDVRTSHWEeaiqetkggadnrklaeecYfLWK 113
glial.dklypgarealkaLkrrGikvailTggdr.naeallealgla.l
++ ++ l +++++ l +L++ +++ +lT+gdr++++++ ea+++ ++
query 114 STRLQhMILADDVKAMLTELRKE-VRLLLLTNGDRqTQREKIEACACQsY 162
fdviidsdevggvgpivvgKPkpeifllalerlgvkpeevgpevlmVGDg
fd+i++++e + KP+p if + ++ lgv+p ++ +mVGD+
query 163 FDAIVIGGEQK------EEKPAPSIFYHCCDLLGVQPGDC----VMVGDT 202
vnDapalaa.AGv.gvamgngg<-*
+ +++ + +AG+++++++n +
query 203 LETDIQGGLnAGLkATVWINKS 224
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The alignments of the top-scoring domains of 2gfh (query) protein using Pfam 21.0 (Janelia Farm). (http://pfam.janelia.org)
- Shows the highest scored match - Hydrolase
- Score = 96.2
- E value = 1e-25
