Phytanoyl-CoA dioxygenase Sequence and Evolution

Fasta Sequence

>gi|134105315|pdb|2OPW|A Chain A, Crystal Structure Of Human Phytanoyl-Coa Dioxygenase Phyhd1 (Apo) MACLSPSQLQKFQQDGFLVLEGFLSAEECVAMQQRIGEIVAEMDVPLHCRTEFSTQEEEQLRAQGSTDYF LSSGDKIRFFFEKGVFDEKGNFLVPPEKSINKIGHALHAHDPVFKSITHSFKVQTLARSLGLQMPVVVQS MYIFKQPHFGGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSA PGTSFLGSEPARDNSLFVPTPVQRGALVLIHGEVVHKSKQNLSDRSRQAYTFHLMEASGTTWSPENWLQP TAELPFPQLYT

Multiple Sequence Alignment

Figure 1.1
Multiple Sequence Alignment obtained from ClustalX

Figure 1.2
Multiple Sequence Alignment obtained from ClustalX

Figure 1.3
Multiple Sequence Alignment obtained from ClustalX

• 46 analogous sequence compared using ClustalX
• Multiple Sequence Alignment is of high quality and conservation
• Fe2+ and 2-Oxogylterate binding sites shown

Phylogenetic Trees

Figure 2.1
Rooted Phylogenetic Tree obtained from Phylip
Drawn using Phylodendron
http://iubio.bio.indiana.edu/treeapp/

Figure 2.1
Unrooted Phylogenetic Tree obtained from Phylip
Drawn using Phylodendron
http://iubio.bio.indiana.edu/treeapp/

Figure 3
Rooted Consensus Tree with bootstrap values obtained from Phylip
Drawn using Phylodendron
http://iubio.bio.indiana.edu/treeapp/

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