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Below there are pages provided which contain tables for our target proteins that summarize important information and links to databases. When you have formed groups and chosen your target protein, claim the target by adding your names into the protein assignment table below.

Protein structure and sequences

Target PDB Table contains links to stucture and sequence data.

Human orthologs of target proteins

Target Blast and Symatlas Table contains preset Blast search and links to functional data of human and mouse orthologs.

Please choose from the following targets:

high priority: 2, 5, 7, 9, 10, 11, 13, 18, 20, 21, 22
alternative targets: 1, 12
do not initially choose: 3, 4, 6, 8, 14, 15, 16, 17, 19

Protein Assignment Table

target number PDB code protein name investigators
16 3c5hA glucocorticoid receptor DNA binding factor 1 Elizabeth Skippington, Mittchell Stanton-Cook, Thomas Huber
18 2cfsA Pyridoxal (pyridoxine, vitamin B6) phosphatase Yong Ming Lim, Du Guoqing, Sitoh Kheng Wai
5 2opw Phytanoyl-CoA dioxygenase domain containing 1 isoform a Eleanor McDonald, Liam Coulthard and Daniel Foskey
7 2ph1A nucleotide binding protein 2 (MinD homolog, E.coli) Mo Zhao, Siowwei Lee, Kenn Lu
13 2pbl Arylformamidase Basma Al Alaiwat, Sebastian Mynott, Thomas Parker
22 3b5qA Arylsulfatase K Darshani Rupasinghe, Natasha Ferber
9 2nxf hypothetical protein LOC56985 Ivana Ferreira, Connor Skennerton, Nuwan Dahanayake
21 2ijz Aspartyl Aminopeptidase Luke Budianto Ishak, Krishna-Lila Shastri, Teng Meng Hua
11 2ece Selenium binding protein Lopson Kebapetswe, Robert O'Malley
20 2qq5 dehydrogenase/reductase (SDR family) member 1 Anton Lord, Charlie Brunello and Matthew Lovell
1 2qgnA tRNA isopentenyltransferase 1 Jinhsien Choo, Emilyn Tan and Ana Lei

Winter vacation scholarship

Please indicate if you're interested to be considered for the winter vacation scholarship to complete your work for publication. This will have no influence on the project mark!

name protein name keen and available for scholarship
Elizabeth Skippington glucocorticoid receptor DNA binding factor 1 yes
Basma Al Alaiwat, Sebastian Mynott Arylformamidase yes
Ivana Ferreira, Connor Skennerton hypothetical protein LOC56985 yes
Anton Lord dehydrogenase/reductase (SDR family) member 1 yes

--ThomasHuber 17:00, 24 April 2008 (EST)