Protein Function: Difference between revisions

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http://www.doe-mbi.ucla.edu/Services/ProKnow/seq/upload/1756957907/image/display_image_process.html
http://www.doe-mbi.ucla.edu/Services/ProKnow/seq/upload/1756957907/image/display_image_process.html
GO Number for Molecular Function
http://www.doe-mbi.ucla.edu/Services/ProKnow/get_ontology.php?go=0003723

Revision as of 05:50, 15 May 2007

Also see Discussion

Not sure if this is the same link..?

http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=AAH33759.1


Link to BLAST and List of Conservation <Sorted by organism match not blast match>

http://www.ncbi.nlm.nih.gov/sutils/blink.cgi?pid=23510352&tax=0&org=0&pdb=0&sort=1&cut=100&all=0


Link to BLAST Conserved Domain

http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?ascbin=2&maxaln=10&seltype=3&uid=47844&aln=6,0,8,11,11,22,72,86,94,49,135,145,21,157,166,23,180,200,21&querygi=15988381&querynm=1h6ka(query)


Link to Pfam Family MIF4G Domain

http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF02854



RESULTS


Link to LOCATE Blastp

http://locate.imb.uq.edu.au/cgi-bin/blast_scldb.cgi


LOCATE 2 - Mouse

http://locate.imb.uq.edu.au/cgi-bin/report.cgi?entry=202601

http://locate.imb.uq.edu.au/cgi-bin/report.cgi?entry=202602

Paip - http://locate.imb.uq.edu.au/cgi-bin/report.cgi?entry=206042


STRING

http://string.embl.de/newstring_cgi/show_link_summary.pl


PROFUNC

http://www.ebi.ac.uk/thornton-srv/databases/cgi-bin/profunc/GetResults.pl?source=profunc&user_id=ay65&code=075103


PROKNOW (without FSSP files)

Table Link - http://www.doe-mbi.ucla.edu/Services/ProKnow/seq/upload/1756957907/master_table.html


http://www.doe-mbi.ucla.edu/Services/ProKnow/display_gograph.php?shape=box&edgecolor=blue&width=0.2&height=0.01&fontsize=10&page=50,50&size=50,50&db=0&geneont=0003723:1.0000


http://www.doe-mbi.ucla.edu/Services/ProKnow/seq/upload/1756957907/image/display_image_process.html


GO Number for Molecular Function http://www.doe-mbi.ucla.edu/Services/ProKnow/get_ontology.php?go=0003723