Protein Structure: Difference between revisions

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Crystal structure of the human nuclear cap binding complex. (PDB no: 1H6K)
Crystal structure of the human nuclear cap binding complex. (PDB no: 1H6K)
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?CMD=search&DB=pubmed]
[http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?CMD=search&DB=pubmed]
Novel eIF4G domain homologues linking mRNA translation with nonsensemediated mRNA decay
[http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TCV-4152YNK-6&_user=331728&_coverDate=09%2F01%2F2000&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000016898&_version=1&_urlVersion=0&_userid=331728&md5=fa4730975475c64dcdfaa1462a76fa13]
*This article is quite relevant to protein function

Revision as of 06:57, 8 May 2007

The so-called MIF4G domain found in several other proteins involved in RNA metabolism. (Mazza et al.)(PDB no: 1H6K)

- Coordinates assembly of translational machinery

DALI results

    1. SUMMARY: PDB/chain identifiers and structural alignment statistics
 NR. STRID1 STRID2  Z   RMSD LALI LSEQ2 %IDE REVERS PERMUT NFRAG TOPO PROTEIN
  1: 3028-A 2i2o-A 37.1  0.0  206   206  100      0      0     1 S    STRUCTURAL GENOMICS, UNKNOWN FUNCTION 	eif4g-like prote
  2: 3028-A 1hu3-A 15.2  2.7  164   204   23      0      0    12 S     TRANSLATION 	eif4gii fragment (eukaryotic initiation f
  3: 3028-A 1uw4-B 10.9  3.6  164   247    9      0      0    12 S    NONSENSE MEDIATED MRNA DECAY PROTEIN 	regulator of nons
  4: 3028-A 1h6k-A 10.6  3.9  175   728   11      0      0    11 S     NUCLEAR PROTEIN 	cbp80 fragment (ncbp 80 kda subunit, 
  5: 3028-A 2db0-A  8.1  3.3  148   239   14      0      0    13 S    PROTEIN BINDING 	253aa long hypothetical protein (hypot
  6: 3028-A 1b3u-A  8.0 27.7  150   588   13      0      0    13 S    SCAFFOLD PROTEIN 	protein phosphatase pp2a fragment

Articles

A conserved HEAT domain within eIF4G directs assembly of the translation initiation machinery. (PDB no:1HU3) [1]

Crystal structure of the human nuclear cap binding complex. (PDB no: 1H6K) [2]

Novel eIF4G domain homologues linking mRNA translation with nonsensemediated mRNA decay [3]

  • This article is quite relevant to protein function