References (1zkd): Difference between revisions
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==References== | ==References== | ||
Baker, N.A., Sept, D., Joseph, S., Holst, M.J. & McCammon, J.A. (2001). Electrostatics of nanosystems: application to microtubules and the ribosome. ''Proc. Natl. Acad. Sci.'', '''98''', 10037-10041. | Baker, N.A., Sept, D., Joseph, S., Holst, M.J. & McCammon, J.A. (2001). Electrostatics of nanosystems: application to microtubules and the ribosome. ''Proc. Natl. Acad. Sci.'', '''98''', 10037-10041. | ||
DeLano, W.L. (2002). The PyMOL Molecular Graphics System. DeLano Scientific, Palo Alto, CA, USA. | DeLano, W.L. (2002). The PyMOL Molecular Graphics System. DeLano Scientific, Palo Alto, CA, USA. | ||
Fink, J.L., Aturaliya, R.N., Davis, M.J., Zhang, F., Hanson, K., Teasdale, M.S., Kai, C., Kawai, J., Carninci, P., Hayashizaki, Y. & Teasdale, R.D. (2006). LOCATE: a mouse protein subcellular localization database. ''Nucleic Acids Res.'', '''34'''(Database issue),D213-7. | Fink, J.L., Aturaliya, R.N., Davis, M.J., Zhang, F., Hanson, K., Teasdale, M.S., Kai, C., Kawai, J., Carninci, P., Hayashizaki, Y. & Teasdale, R.D. (2006). LOCATE: a mouse protein subcellular localization database. ''Nucleic Acids Res.'', '''34'''(Database issue),D213-7. | ||
Gough, J., Karplus, K., Hughey, R. & Chothia, C. (2001). Assignment of homology to genome sequences using a library of Hidden Markov Models that represent all proteins of known structure. ''J. Mol. Biol.'', '''313''', 903-919. | Gough, J., Karplus, K., Hughey, R. & Chothia, C. (2001). Assignment of homology to genome sequences using a library of Hidden Markov Models that represent all proteins of known structure. ''J. Mol. Biol.'', '''313''', 903-919. | ||
Hawkins, J., Davis, L. & Bodén, M. (2006). Predicting Nuclear Proteins. Manuscript Submitted to ''Bioinformatics''. | Hawkins, J., Davis, L. & Bodén, M. (2006). Predicting Nuclear Proteins. Manuscript Submitted to ''Bioinformatics''. | ||
Krissinel, E. & Henrick, K. (2004). Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. ''Acta Cryst.'', '''D60''', 2256-2268. | Krissinel, E. & Henrick, K. (2004). Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. ''Acta Cryst.'', '''D60''', 2256-2268. | ||
Laskowski, R. A., Watson, J. D. & Thornton, J. M. (2005). ProFunc: a server for predicting protein function from 3D structure. ''Nucleic Acids Res.'', '''33''', W89-W93. | Laskowski, R. A., Watson, J. D. & Thornton, J. M. (2005). ProFunc: a server for predicting protein function from 3D structure. ''Nucleic Acids Res.'', '''33''', W89-W93. | ||
Laskowski, R.A., Watson, J.D. & Thornton, J.M. (2005). Protein function prediction using local 3D templates. ''J. Mol. Biol.'', '''351''', 614-626. | Laskowski, R.A., Watson, J.D. & Thornton, J.M. (2005). Protein function prediction using local 3D templates. ''J. Mol. Biol.'', '''351''', 614-626. | ||
Madera, M., Vogel, C., Kummerfeld, S.K., Chothia, C. & Gough, J. (2004). The SUPERFAMILY database in 2004: additions and improvements. ''Nucl. Acids Res.'', '''32''', D235-D239. | Madera, M., Vogel, C., Kummerfeld, S.K., Chothia, C. & Gough, J. (2004). The SUPERFAMILY database in 2004: additions and improvements. ''Nucl. Acids Res.'', '''32''', D235-D239. | ||
Revision as of 06:21, 9 June 2007
References
Baker, N.A., Sept, D., Joseph, S., Holst, M.J. & McCammon, J.A. (2001). Electrostatics of nanosystems: application to microtubules and the ribosome. Proc. Natl. Acad. Sci., 98, 10037-10041.
DeLano, W.L. (2002). The PyMOL Molecular Graphics System. DeLano Scientific, Palo Alto, CA, USA.
Fink, J.L., Aturaliya, R.N., Davis, M.J., Zhang, F., Hanson, K., Teasdale, M.S., Kai, C., Kawai, J., Carninci, P., Hayashizaki, Y. & Teasdale, R.D. (2006). LOCATE: a mouse protein subcellular localization database. Nucleic Acids Res., 34(Database issue),D213-7.
Gough, J., Karplus, K., Hughey, R. & Chothia, C. (2001). Assignment of homology to genome sequences using a library of Hidden Markov Models that represent all proteins of known structure. J. Mol. Biol., 313, 903-919.
Hawkins, J., Davis, L. & Bodén, M. (2006). Predicting Nuclear Proteins. Manuscript Submitted to Bioinformatics.
Krissinel, E. & Henrick, K. (2004). Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Cryst., D60, 2256-2268.
Laskowski, R. A., Watson, J. D. & Thornton, J. M. (2005). ProFunc: a server for predicting protein function from 3D structure. Nucleic Acids Res., 33, W89-W93.
Laskowski, R.A., Watson, J.D. & Thornton, J.M. (2005). Protein function prediction using local 3D templates. J. Mol. Biol., 351, 614-626.
Madera, M., Vogel, C., Kummerfeld, S.K., Chothia, C. & Gough, J. (2004). The SUPERFAMILY database in 2004: additions and improvements. Nucl. Acids Res., 32, D235-D239.
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