Structural analysis of 2qgn: Difference between revisions

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==Surface Properties of 2qgn==
==Surface Properties of 2qgn==
[[Image:surface prop.png]]
[[Image:surface prop.png]]
Red indicates positive charge, while blue indicates negative.

Revision as of 06:50, 27 May 2008

Protein Sequence in FASTA format

>gi|152149497|pdb|2QGN|A Chain A, Crystal Structure Of Trna Isopentenylpyrophosphate Transferase (Bh2366) From Bacillus Halodurans, Northeast Structural Genomics Consortium Target Bhr41. XKEKLVAIVGPTAVGKTKTSVXLAKRLNGEVISGDSXQVYRGXDIGTAKITAEEXDGVPHHLIDIKDPSE SFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLGDIRADEDYRHELEAFVNSYGVQALH DKLSKIDPKAAAAIHPNNYRRVIRALEIIKLTGKTVTEQARHEEETPSPYNLVXIGLTXERDVLYDRINR RVDQXVEEGLIDEAKKLYDRGIRDCQSVQAIGYKEXYDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFRN KANVTWFDXTDVDFDKKIXEIHNFIAGKLEEKSKLEHHHHHH

Structure of Protein

Figure 1
Structure of TRNA isopentenyl transferase 1 showing helix, sheet and loop. Image constructed from PyMOL.


Structural Analysis

Analysis of the secondary structure acquired from Protein Data Bank showed results as displayed below :

Secondary.jpg

Surface Properties of 2qgn

Surface prop.png Red indicates positive charge, while blue indicates negative.