Structure work done by Michael: Difference between revisions
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Yellow region on right hand picture is conserved region from sequence multiple alignment. Figure on left is structure allignments (note pink ligands in first and purple ligands in second). | Yellow region on right hand picture is conserved region from sequence multiple alignment. Figure on left is structure allignments (note pink ligands in first and purple ligands in second). | ||
List of structures is: mol1A/1dfcA/1jlyA/1ijtA/1qxmB/1ev2A/1bfgA/1axmA/4fgfA/ | |||
[[Image:comparison stuff (note ligands).jpeg]] | [[Image:comparison stuff (note ligands).jpeg]] | ||
Revision as of 08:10, 19 May 2009
Unfortunately PDB databank down so very little work was able to be done.
Here is link to Dali file for structural allignment of Fascin 1: http://ekhidna.biocenter.helsinki.fi/dali_server/results/20090512-0050-75e94ac980c3ad7a77bfb91e13a9d591/index.html
From here comparative structure allignments were possible. All of which were very similar to fascin 1 providing more clues as to function of the protein.
Yellow region on right hand picture is conserved region from sequence multiple alignment. Figure on left is structure allignments (note pink ligands in first and purple ligands in second).
List of structures is: mol1A/1dfcA/1jlyA/1ijtA/1qxmB/1ev2A/1bfgA/1axmA/4fgfA/
.jpeg)
cropped print screen of ligands. Pink is: 4fgfA
cropped print screen of ligands. Purple is: 1qxmB
