Talk:Evolution for haloacid dehalogenase-like hydrolase domain containing 2: Difference between revisions

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             AA RALKAVLVDL+GTLHIEDAAVPGAQEALKRLR  SV +RFVTNTTKE+K+DLLERL+
             AA RALKAVLVDL+GTLHIEDAAVPGAQEALKRLR  SV +RFVTNTTKE+K+DLLERL+
Sbjct  2    AACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLR  61
Sbjct  2    AACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLR  61
Query  62  KLEFEISEDEIFTSLTAARNLIEQKQVRPXLLLDDRALPEFTGVQTQDPNAVVIGLAPEH  121
Query  62  KLEFEISEDEIFTSLTAARNLIEQKQVRPXLLLDDRALPEFTGVQTQDPNAVVIGLAPEH  121
             KLEF+ISEDEIFTSLTAAR+L+E+KQVRP LL+DDRALP+F G+QT DPNAVV+GLAPEH
             KLEF+ISEDEIFTSLTAAR+L+E+KQVRP LL+DDRALP+F G+QT DPNAVV+GLAPEH
Sbjct  62  KLEFDISEDEIFTSLTAARSLLERKQVRPMLLVDDRALPDFKGIQTSDPNAVVMGLAPEH  121
Sbjct  62  KLEFDISEDEIFTSLTAARSLLERKQVRPMLLVDDRALPDFKGIQTSDPNAVVMGLAPEH  121
Query  122  FHYQLLNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAXVVGKPE  181
Query  122  FHYQLLNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAXVVGKPE  181
             FHYQ+LNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKA VVGKPE
             FHYQ+LNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKA VVGKPE
Sbjct  122  FHYQILNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKATVVGKPE  181
Sbjct  122  FHYQILNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKATVVGKPE  181
Query  182  KTFFLEALRDADCAPEEAVXIGDDCRDDVDGAQNIGXLGILVKTGKYKAADEEKINPPPY  241
Query  182  KTFFLEALRDADCAPEEAVXIGDDCRDDVDGAQNIGXLGILVKTGKYKAADEEKINPPPY  241
             KTFFLEALR  C PEEAV IGDDCRDDV GAQ++G LGILVKTGKY+A+DEEKINPPPY
             KTFFLEALR  C PEEAV IGDDCRDDV GAQ++G LGILVKTGKY+A+DEEKINPPPY
Sbjct  182  KTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTGKYRASDEEKINPPPY  241
Sbjct  182  KTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTGKYRASDEEKINPPPY  241
Query  242  LTCESFPHAVDHILQHLL  259
Query  242  LTCESFPHAVDHILQHLL  259
             LTCESFPHAVDHILQHLL
             LTCESFPHAVDHILQHLL

Revision as of 06:30, 1 May 2007

ORIGIN 

       1 saarralkav lvdlngtlhi edaavpgaqe alkrlratsv xvrfvtnttk etkkdllerl
      61 kklefeised eiftsltaar nlieqkqvrp xlllddralp eftgvqtqdp navviglape
     121 hfhyqllnqa frllldgapl iaihkaryyk rkdglalgpg pfvtaleyat dtkaxvvgkp
     181 ektfflealr dadcapeeav xigddcrddv dgaqnigxlg ilvktgkyka adeekinppp
     241 yltcesfpha vdhilqhll

//

http://www.ncbi.nlm.nih.gov/blast/bl2seq/wblast2.cgi?4 Score = 388 bits (997), Expect = 2e-106, Method: Composition-based stats. 

Identities = 225/258 (87%), Positives = 243/258 (94%), Gaps = 0/258 (0%)

Query 2 AARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVXVRFVTNTTKETKKDLLERLK 61 

           AA RALKAVLVDL+GTLHIEDAAVPGAQEALKRLR  SV +RFVTNTTKE+K+DLLERL+

Sbjct 2 AACRALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLR 61

Query 62 KLEFEISEDEIFTSLTAARNLIEQKQVRPXLLLDDRALPEFTGVQTQDPNAVVIGLAPEH 121 

           KLEF+ISEDEIFTSLTAAR+L+E+KQVRP LL+DDRALP+F G+QT DPNAVV+GLAPEH

Sbjct 62 KLEFDISEDEIFTSLTAARSLLERKQVRPMLLVDDRALPDFKGIQTSDPNAVVMGLAPEH 121

Query 122 FHYQLLNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAXVVGKPE 181 

           FHYQ+LNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKA VVGKPE

Sbjct 122 FHYQILNQAFRLLLDGAPLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKATVVGKPE 181

Query 182 KTFFLEALRDADCAPEEAVXIGDDCRDDVDGAQNIGXLGILVKTGKYKAADEEKINPPPY 241 

           KTFFLEALR   C PEEAV IGDDCRDDV GAQ++G LGILVKTGKY+A+DEEKINPPPY

Sbjct 182 KTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKTGKYRASDEEKINPPPY 241

Query 242 LTCESFPHAVDHILQHLL 259 

           LTCESFPHAVDHILQHLL

Sbjct 242 LTCESFPHAVDHILQHLL 259

      • 94% similarity so very matching in function and very conserved?***

View above in edit panel... for some reason it shows up weirdly in view.

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