2gnx BlastP: Difference between revisions
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BLASTP 2.2.12 [Aug-07-2005] | BLASTP 2.2.12 [Aug-07-2005] | ||
Reference: | Reference: | ||
Line 30: | Line 29: | ||
[[Image:blastp.gif]] | [[Image:blastp.gif]] | ||
Sequences producing significant alignments: | |||
{| border="1" | |||
|- | |||
| | |||
| | |||
| | |||
| Score (Bits) | |||
| E Value | |||
|- | |||
| ref | |||
| XP_001163972.1 | |||
| PREDICTED: similar to FLJ32549 protein [Pan | |||
| 850 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_001116860.1 | |||
| PREDICTED: hypothetical protein isoform 1 [M | |||
| 848 | |||
| 0.0 | |||
|- | |||
| ref | |||
| NP_689653.3 | |||
| hypothetical protein LOC144577 [Homo sapiens... | |||
| 847 | |||
| 0.0 | |||
|- | |||
| gb | |||
| AAH36246.1 | |||
| FLJ32549 protein [Homo sapiens] | |||
| 846 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_001116875.1 | |||
| PREDICTED: hypothetical protein isoform 3 [M | |||
| 843 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_531657.2 | |||
| PREDICTED: hypothetical protein XP_531657 [Cani | |||
| 827 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_615557.3 | |||
| PREDICTED: hypothetical protein [Bos taurus] | |||
| 823 | |||
| 0.0 | |||
|- | |||
| gb | |||
| EDL24424.1 | |||
| cDNA sequence BC048403, isoform CRA_a [Mus muscul | |||
| 803 | |||
| 0.0 | |||
|- | |||
| ref | |||
| NP_766610.2 | |||
| hypothetical protein LOC270802 [Mus musculus... | |||
| 803 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_576234.2 | |||
| PREDICTED: hypothetical protein [Rattus norv... | |||
| 802 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_001364942.1 | |||
| PREDICTED: hypothetical protein [Monodelphis | |||
| 797 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_416063.1 | |||
| PREDICTED: hypothetical protein [Gallus gallus] | |||
| 796 | |||
| 0.0 | |||
|- | |||
| dbj | |||
| BAC39804.1 | |||
| unnamed protein product [Mus musculus] | |||
| 760 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_001116868.1 | |||
| PREDICTED: hypothetical protein isoform 2 [M | |||
| 743 | |||
| 0.0 | |||
|- | |||
| ref | |||
| NP_001085035.1 | |||
| hypothetical protein LOC432102 [Xenopus l... | |||
| 697 | |||
| 0.0 | |||
|- | |||
| ref | |||
| NP_001025261.1 | |||
| hypothetical protein LOC555715 [Danio rer... | |||
| 665 | |||
| 0.0 | |||
|- | |||
| ref | |||
| NP_001076454.1 | |||
| hypothetical protein LOC100005809 [Danio ... | |||
| 661 | |||
| 0.0 | |||
|- | |||
| ref | |||
| XP_001331282.1 | |||
| PREDICTED: hypothetical protein [Danio rerio | |||
| 598 | |||
| 2e-169 | |||
|- | |||
| emb | |||
| CAG12393.1 | |||
| unnamed protein product [Tetraodon nigroviridis] | |||
| 593 | |||
| 8e-168 | |||
|- | |||
| pdb | |||
| 2GNX | |||
| A Chain A, X-Ray Structure Of A Hypothetical Protein... | |||
| 554 | |||
| 3e-156 | |||
|- | |||
| dbj | |||
| BAE41440.1 | |||
| unnamed protein product [Mus musculus] | |||
| 508 | |||
| 2e-142 | |||
|- | |||
| ref | |||
| NP_001038719.1 | |||
| hypothetical protein LOC692281 [Danio rer... | |||
| 357 | |||
| 1e-96 | |||
|- | |||
| ref | |||
| XP_624797.1 | |||
| PREDICTED: hypothetical protein [Apis mellifera | |||
| 235 | |||
| 3e-60 | |||
|- | |||
| ref | |||
| XP_974676.1 | |||
| PREDICTED: hypothetical protein [Tribolium cast | |||
| 232 | |||
| 5e-59 | |||
|- | |||
| ref | |||
| XP_001193974.1 | |||
| PREDICTED: hypothetical protein [Strongyloce | |||
| 208 | |||
| 5e-52 | |||
|- | |||
| ref | |||
| XP_797380.2 | |||
| PREDICTED: hypothetical protein, partial [St... | |||
| 207 | |||
| 2e-51 | |||
|- | |||
| dbj | |||
| BAE37112.1 | |||
| unnamed protein product [Mus musculus] >dbj B... | |||
| 134 | |||
| 2e-29 | |||
|- | |||
| gb | |||
| EDL24425.1 | |||
| cDNA sequence BC048403, isoform CRA_b [Mus muscul | |||
| 132 | |||
| 6e-29 | |||
|- | |||
| ref | |||
| XP_642387.1 | |||
| hypothetical protein DDBDRAFT_0205477 [Dicty... | |||
| 87.8 | |||
| 1e-15 | |||
|- | |||
| emb | |||
| CAJ08583.1 | |||
| hypothetical protein, conserved [Leishmania majo | |||
| 36.6 | |||
| 3.5 | |||
|- | |||
|} | |||
return to [[Functional Analysis]] |
Latest revision as of 23:54, 11 June 2007
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference: Schäffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
RID: 6T33UXG4012
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
5,035,888 sequences; 1,742,339,864 total letters
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Length=445
Sequences producing significant alignments:
Score (Bits) | E Value | |||
ref | XP_001163972.1 | PREDICTED: similar to FLJ32549 protein [Pan | 850 | 0.0 |
ref | XP_001116860.1 | PREDICTED: hypothetical protein isoform 1 [M | 848 | 0.0 |
ref | NP_689653.3 | hypothetical protein LOC144577 [Homo sapiens... | 847 | 0.0 |
gb | AAH36246.1 | FLJ32549 protein [Homo sapiens] | 846 | 0.0 |
ref | XP_001116875.1 | PREDICTED: hypothetical protein isoform 3 [M | 843 | 0.0 |
ref | XP_531657.2 | PREDICTED: hypothetical protein XP_531657 [Cani | 827 | 0.0 |
ref | XP_615557.3 | PREDICTED: hypothetical protein [Bos taurus] | 823 | 0.0 |
gb | EDL24424.1 | cDNA sequence BC048403, isoform CRA_a [Mus muscul | 803 | 0.0 |
ref | NP_766610.2 | hypothetical protein LOC270802 [Mus musculus... | 803 | 0.0 |
ref | XP_576234.2 | PREDICTED: hypothetical protein [Rattus norv... | 802 | 0.0 |
ref | XP_001364942.1 | PREDICTED: hypothetical protein [Monodelphis | 797 | 0.0 |
ref | XP_416063.1 | PREDICTED: hypothetical protein [Gallus gallus] | 796 | 0.0 |
dbj | BAC39804.1 | unnamed protein product [Mus musculus] | 760 | 0.0 |
ref | XP_001116868.1 | PREDICTED: hypothetical protein isoform 2 [M | 743 | 0.0 |
ref | NP_001085035.1 | hypothetical protein LOC432102 [Xenopus l... | 697 | 0.0 |
ref | NP_001025261.1 | hypothetical protein LOC555715 [Danio rer... | 665 | 0.0 |
ref | NP_001076454.1 | hypothetical protein LOC100005809 [Danio ... | 661 | 0.0 |
ref | XP_001331282.1 | PREDICTED: hypothetical protein [Danio rerio | 598 | 2e-169 |
emb | CAG12393.1 | unnamed protein product [Tetraodon nigroviridis] | 593 | 8e-168 |
pdb | 2GNX | A Chain A, X-Ray Structure Of A Hypothetical Protein... | 554 | 3e-156 |
dbj | BAE41440.1 | unnamed protein product [Mus musculus] | 508 | 2e-142 |
ref | NP_001038719.1 | hypothetical protein LOC692281 [Danio rer... | 357 | 1e-96 |
ref | XP_624797.1 | PREDICTED: hypothetical protein [Apis mellifera | 235 | 3e-60 |
ref | XP_974676.1 | PREDICTED: hypothetical protein [Tribolium cast | 232 | 5e-59 |
ref | XP_001193974.1 | PREDICTED: hypothetical protein [Strongyloce | 208 | 5e-52 |
ref | XP_797380.2 | PREDICTED: hypothetical protein, partial [St... | 207 | 2e-51 |
dbj | BAE37112.1 | unnamed protein product [Mus musculus] >dbj B... | 134 | 2e-29 |
gb | EDL24425.1 | cDNA sequence BC048403, isoform CRA_b [Mus muscul | 132 | 6e-29 |
ref | XP_642387.1 | hypothetical protein DDBDRAFT_0205477 [Dicty... | 87.8 | 1e-15 |
emb | CAJ08583.1 | hypothetical protein, conserved [Leishmania majo | 36.6 | 3.5 |
return to Functional Analysis