LOC56985 references: Difference between revisions
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'''DeLano Scientific LLC.''' (2007). MacPyMOL: A PyMOL-based Molecular Graphics Application for MacOS X. Palo Alto, CA, USA. | '''DeLano Scientific LLC.''' (2007). MacPyMOL: A PyMOL-based Molecular Graphics Application for MacOS X. Palo Alto, CA, USA. | ||
'''Doi, K., Antanaitis, B. C., & Aisen, P.''' (1988). The binuclear iron centers of uteroferrin and the purple acid phosphatases. Structure and Bonding , 70, 1 - 26. | |||
'''Dundas, J., Ouyang, Z., Tseng, J., Binkowski, A., Turpaz, Y., & Liang, J.''' (2006). CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated resiudes. Nucleic Acid Research , 34, W116 - W118. | '''Dundas, J., Ouyang, Z., Tseng, J., Binkowski, A., Turpaz, Y., & Liang, J.''' (2006). CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated resiudes. Nucleic Acid Research , 34, W116 - W118. | ||
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'''Larkin, M., Blackshields, G., Brown, N., Chenna, R., McGettigan, P., McWilliam, H., et al.''' (2007). Clustal W and Clustal X version 2.0. Bioinformatics , 23, 2947 - 2948. | '''Larkin, M., Blackshields, G., Brown, N., Chenna, R., McGettigan, P., McWilliam, H., et al.''' (2007). Clustal W and Clustal X version 2.0. Bioinformatics , 23, 2947 - 2948. | ||
'''Leung, E., Teixeira, M., Guddat, L., Mitić, N., & Schenk, G.''' (2007). Structure, function and diversity of purple acid phosphatases. Curr Topics Plant Biol , 8, 21 - 31. | |||
'''Murzin, A. G., Brenner, S. E., Hubbard, T., & Chothia, C.''' (1995). SCOP: a structural classification of proteins database for the investigation of sequences and structures. Journal of Molecular Biology , 247, 536 - 540. | '''Murzin, A. G., Brenner, S. E., Hubbard, T., & Chothia, C.''' (1995). SCOP: a structural classification of proteins database for the investigation of sequences and structures. Journal of Molecular Biology , 247, 536 - 540. | ||
'''Oddie, G., Schenk, G., Angel, N., Walsh, N., Guddat, L., de Jersey, J., et al.''' (2000). Structure, function, and regulation of tartrate-resistant acid phosphatase. Bone , 27, 575 - 584. | |||
'''Orengo, C., Michie, A., Jones, S., Jones, D., Swindells, M., & Thornton, J.''' (1997). CATH- A Hierarchic Classification of Protein Domain Structures. Structure , 5 (8), 1093 - 1108. | '''Orengo, C., Michie, A., Jones, S., Jones, D., Swindells, M., & Thornton, J.''' (1997). CATH- A Hierarchic Classification of Protein Domain Structures. Structure , 5 (8), 1093 - 1108. | ||
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'''Wallace, A. C., Laskowski, R. A., & Thornton, J. M.''' (1995). LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions. Protein Engineering , 8, 127 - 134. | '''Wallace, A. C., Laskowski, R. A., & Thornton, J. M.''' (1995). LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions. Protein Engineering , 8, 127 - 134. | ||
'''Wilcox, D. E.''' (1996). Binuclear Metallohydrolases. Chem. Rev. , 96, 2435 - 2458. | |||
Revision as of 10:07, 3 June 2008
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DeLano Scientific LLC. (2007). MacPyMOL: A PyMOL-based Molecular Graphics Application for MacOS X. Palo Alto, CA, USA.
Doi, K., Antanaitis, B. C., & Aisen, P. (1988). The binuclear iron centers of uteroferrin and the purple acid phosphatases. Structure and Bonding , 70, 1 - 26.
Dundas, J., Ouyang, Z., Tseng, J., Binkowski, A., Turpaz, Y., & Liang, J. (2006). CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated resiudes. Nucleic Acid Research , 34, W116 - W118.
Finn, R., Mistry, J., Schuster-Böckler, B., Griffiths-Jones, S., Hollich, V., Lassmann, T., et al. (2006). Pfam: clans, web tools and services. Nucleic Acids Research , 34, D247-D251.
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Kabsch W. & Sander, C. (1983) Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22(12):2577-637
Koonin, E. V. (1994). Conserved sequence pattern in a wide variety of phosphoesterases. Protein Science , 3, 356-358.
Larkin, M., Blackshields, G., Brown, N., Chenna, R., McGettigan, P., McWilliam, H., et al. (2007). Clustal W and Clustal X version 2.0. Bioinformatics , 23, 2947 - 2948.
Leung, E., Teixeira, M., Guddat, L., Mitić, N., & Schenk, G. (2007). Structure, function and diversity of purple acid phosphatases. Curr Topics Plant Biol , 8, 21 - 31.
Murzin, A. G., Brenner, S. E., Hubbard, T., & Chothia, C. (1995). SCOP: a structural classification of proteins database for the investigation of sequences and structures. Journal of Molecular Biology , 247, 536 - 540.
Oddie, G., Schenk, G., Angel, N., Walsh, N., Guddat, L., de Jersey, J., et al. (2000). Structure, function, and regulation of tartrate-resistant acid phosphatase. Bone , 27, 575 - 584.
Orengo, C., Michie, A., Jones, S., Jones, D., Swindells, M., & Thornton, J. (1997). CATH- A Hierarchic Classification of Protein Domain Structures. Structure , 5 (8), 1093 - 1108.
Page, R. D. (1996). TREEVIEW: An application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences , 12, 357-358.
Schenk, G., Elliott, T. W., Leung, E., Carrington, L. E., Mitić, N., & Guddat, L. R. (2008). Crystal structures of a purple acid phosphatase, representing different steps of this enzyme's catalytic cycle. BMC Structural Biology , 8 (6).
Schenk, G., Korsinczky, M. L., Hume, D. A., Hamilton, S., & Jersey, J. D. (2000). Purple acid phosphatases from bacteria: similarities to mammalian and plant enzymes. Gene , 255, 419 - 424.
Wallace, A. C., Laskowski, R. A., & Thornton, J. M. (1995). LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions. Protein Engineering , 8, 127 - 134.
Wilcox, D. E. (1996). Binuclear Metallohydrolases. Chem. Rev. , 96, 2435 - 2458.
Abstract | Introduction | Results | Discussion |
Conclusion | Method | References
