2gnx BlastP: Difference between revisions

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BLASTP 2.2.12 [Aug-07-2005]
BLASTP 2.2.12 [Aug-07-2005]
BLASTP 2.2.16 (Mar-25-2007)


Reference:
Reference:
Line 33: Line 32:


Sequences producing significant alignments:   
Sequences producing significant alignments:   
             
   
^a ^b ^c ^Score (Bits) ^E Value^
{| border="1"
|-
|
|
|
| Score (Bits)  
| E Value
|-
| ref
| XP_001163972.1
| PREDICTED: similar to FLJ32549 protein [Pan
| 850
| 0.0
|-
| ref
| XP_001116860.1
| PREDICTED: hypothetical protein isoform 1 [M
| 848
| 0.0
|-
| ref
| NP_689653.3
| hypothetical protein LOC144577 [Homo sapiens...
| 847
| 0.0
|-
| gb
| AAH36246.1
| FLJ32549 protein [Homo sapiens]
| 846
| 0.0
|-
| ref
| XP_001116875.1
| PREDICTED: hypothetical protein isoform 3 [M
| 843
| 0.0
|-
| ref
| XP_531657.2
| PREDICTED: hypothetical protein XP_531657 [Cani
| 827
| 0.0
|-
| ref
| XP_615557.3
| PREDICTED: hypothetical protein [Bos taurus]
| 823
| 0.0
|-
| gb
| EDL24424.1
| cDNA sequence BC048403, isoform CRA_a [Mus muscul
| 803
| 0.0
|-
| ref
| NP_766610.2
| hypothetical protein LOC270802 [Mus musculus...
| 803
| 0.0
|-
| ref
| XP_576234.2
| PREDICTED: hypothetical protein [Rattus norv...
| 802
| 0.0
|-
| ref
| XP_001364942.1
| PREDICTED: hypothetical protein [Monodelphis
| 797
| 0.0
|-
| ref
| XP_416063.1
| PREDICTED: hypothetical protein [Gallus gallus]
| 796
| 0.0
|-
| dbj
| BAC39804.1
| unnamed protein product [Mus musculus]
| 760
| 0.0
|-
| ref
| XP_001116868.1
| PREDICTED: hypothetical protein isoform 2 [M
| 743
| 0.0
|-
| ref
| NP_001085035.1
| hypothetical protein LOC432102 [Xenopus l...
| 697
| 0.0
|-
| ref
| NP_001025261.1
| hypothetical protein LOC555715 [Danio rer...
| 665
| 0.0
|-
| ref
| NP_001076454.1
| hypothetical protein LOC100005809 [Danio ...
| 661
| 0.0
|-
| ref
| XP_001331282.1
| PREDICTED: hypothetical protein [Danio rerio
| 598
| 2e-169
|-
| emb
| CAG12393.1
| unnamed protein product [Tetraodon nigroviridis]
| 593
| 8e-168
|-
| pdb
| 2GNX
| A  Chain A, X-Ray Structure Of A Hypothetical Protein...
| 554
| 3e-156
|-
| dbj
| BAE41440.1
| unnamed protein product [Mus musculus]
| 508
| 2e-142
|-
| ref
| NP_001038719.1
| hypothetical protein LOC692281 [Danio rer...
| 357
| 1e-96
|-
| ref
| XP_624797.1
| PREDICTED: hypothetical protein [Apis mellifera
| 235
| 3e-60
|-
| ref
| XP_974676.1
| PREDICTED: hypothetical protein [Tribolium cast
| 232
| 5e-59
|-
| ref
| XP_001193974.1
| PREDICTED: hypothetical protein [Strongyloce
| 208
| 5e-52
|-
| ref
| XP_797380.2
| PREDICTED: hypothetical protein, partial [St...
| 207
| 2e-51
|-
| dbj
| BAE37112.1
| unnamed protein product [Mus musculus] >dbj B...
| 134
| 2e-29
|-
| gb
| EDL24425.1
| cDNA sequence BC048403, isoform CRA_b [Mus muscul
| 132
| 6e-29
|-
| ref
| XP_642387.1
| hypothetical protein DDBDRAFT_0205477 [Dicty...
| 87.8
| 1e-15
|-
| emb
| CAJ08583.1
| hypothetical protein, conserved [Leishmania majo
| 36.6
| 3.5
|-
|}


| ref|XP_001163972.1| PREDICTED: similar to FLJ32549 protein [Pan | 850 | 0.0 |
return to [[Functional Analysis]]
 
ref|XP_001116860.1|  PREDICTED: hypothetical protein isoform 1 [M  848    0.0    UniGene infoGene info
ref|NP_689653.3|  hypothetical protein LOC144577 [Homo sapiens...  847    0.0    UniGene infoGene info
gb|AAH36246.1|  FLJ32549 protein [Homo sapiens]                    846    0.0    Gene info
ref|XP_001116875.1|  PREDICTED: hypothetical protein isoform 3 [M  843    0.0    UniGene infoGene info
ref|XP_531657.2|  PREDICTED: hypothetical protein XP_531657 [Cani  827    0.0    UniGene infoGene info
ref|XP_615557.3|  PREDICTED: hypothetical protein [Bos taurus]      823    0.0    UniGene infoGene info
gb|EDL24424.1|  cDNA sequence BC048403, isoform CRA_a [Mus muscul  803    0.0 
ref|NP_766610.2|  hypothetical protein LOC270802 [Mus musculus...  803    0.0    UniGene infoGene info
ref|XP_576234.2|  PREDICTED: hypothetical protein [Rattus norv...  802    0.0    UniGene infoGene info
ref|XP_001364942.1|  PREDICTED: hypothetical protein [Monodelphis  797    0.0    Gene info
ref|XP_416063.1|  PREDICTED: hypothetical protein [Gallus gallus]  796    0.0    UniGene infoGene info
dbj|BAC39804.1|  unnamed protein product [Mus musculus]            760    0.0    UniGene infoGene info
ref|XP_001116868.1|  PREDICTED: hypothetical protein isoform 2 [M  743    0.0    UniGene infoGene info
ref|NP_001085035.1|  hypothetical protein LOC432102 [Xenopus l...  697    0.0    Gene info
ref|NP_001025261.1|  hypothetical protein LOC555715 [Danio rer...  665    0.0    UniGene infoGene info
ref|NP_001076454.1|  hypothetical protein LOC100005809 [Danio ...  661    0.0    UniGene infoGene info
ref|XP_001331282.1|  PREDICTED: hypothetical protein [Danio rerio  598    2e-169 UniGene infoGene info
emb|CAG12393.1|  unnamed protein product [Tetraodon nigroviridis]  593    8e-168
pdb|2GNX|A  Chain A, X-Ray Structure Of A Hypothetical Protein...  554    3e-156 Related structures
dbj|BAE41440.1|  unnamed protein product [Mus musculus]             508    2e-142 UniGene infoGene info
ref|NP_001038719.1|  hypothetical protein LOC692281 [Danio rer...  357    1e-96  UniGene infoGene info
ref|XP_624797.1|  PREDICTED: hypothetical protein [Apis mellifera  235    3e-60  UniGene infoGene info
ref|XP_974676.1|  PREDICTED: hypothetical protein [Tribolium cast  232    5e-59  Gene info
ref|XP_001193974.1|  PREDICTED: hypothetical protein [Strongyloce  208    5e-52  UniGene infoGene info
ref|XP_797380.2|  PREDICTED: hypothetical protein, partial [St...  207    2e-51  UniGene infoGene info
dbj|BAE37112.1|  unnamed protein product [Mus musculus] >dbj|B...  134    2e-29  UniGene info
gb|EDL24425.1|  cDNA sequence BC048403, isoform CRA_b [Mus muscul  132    6e-29
ref|XP_642387.1|  hypothetical protein DDBDRAFT_0205477 [Dicty...  87.8    1e-15  Gene info
emb|CAJ08583.1|  hypothetical protein, conserved [Leishmania majo  36.6    3.5

Latest revision as of 23:54, 11 June 2007

BLASTP 2.2.12 [Aug-07-2005]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.

Reference: Schäffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.

RID: 6T33UXG4012


Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 

          5,035,888 sequences; 1,742,339,864 total letters

If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports

Query= Length=445

Blastp.gif


Sequences producing significant alignments:

Score (Bits) E Value
ref XP_001163972.1 PREDICTED: similar to FLJ32549 protein [Pan 850 0.0
ref XP_001116860.1 PREDICTED: hypothetical protein isoform 1 [M 848 0.0
ref NP_689653.3 hypothetical protein LOC144577 [Homo sapiens... 847 0.0
gb AAH36246.1 FLJ32549 protein [Homo sapiens] 846 0.0
ref XP_001116875.1 PREDICTED: hypothetical protein isoform 3 [M 843 0.0
ref XP_531657.2 PREDICTED: hypothetical protein XP_531657 [Cani 827 0.0
ref XP_615557.3 PREDICTED: hypothetical protein [Bos taurus] 823 0.0
gb EDL24424.1 cDNA sequence BC048403, isoform CRA_a [Mus muscul 803 0.0
ref NP_766610.2 hypothetical protein LOC270802 [Mus musculus... 803 0.0
ref XP_576234.2 PREDICTED: hypothetical protein [Rattus norv... 802 0.0
ref XP_001364942.1 PREDICTED: hypothetical protein [Monodelphis 797 0.0
ref XP_416063.1 PREDICTED: hypothetical protein [Gallus gallus] 796 0.0
dbj BAC39804.1 unnamed protein product [Mus musculus] 760 0.0
ref XP_001116868.1 PREDICTED: hypothetical protein isoform 2 [M 743 0.0
ref NP_001085035.1 hypothetical protein LOC432102 [Xenopus l... 697 0.0
ref NP_001025261.1 hypothetical protein LOC555715 [Danio rer... 665 0.0
ref NP_001076454.1 hypothetical protein LOC100005809 [Danio ... 661 0.0
ref XP_001331282.1 PREDICTED: hypothetical protein [Danio rerio 598 2e-169
emb CAG12393.1 unnamed protein product [Tetraodon nigroviridis] 593 8e-168
pdb 2GNX A Chain A, X-Ray Structure Of A Hypothetical Protein... 554 3e-156
dbj BAE41440.1 unnamed protein product [Mus musculus] 508 2e-142
ref NP_001038719.1 hypothetical protein LOC692281 [Danio rer... 357 1e-96
ref XP_624797.1 PREDICTED: hypothetical protein [Apis mellifera 235 3e-60
ref XP_974676.1 PREDICTED: hypothetical protein [Tribolium cast 232 5e-59
ref XP_001193974.1 PREDICTED: hypothetical protein [Strongyloce 208 5e-52
ref XP_797380.2 PREDICTED: hypothetical protein, partial [St... 207 2e-51
dbj BAE37112.1 unnamed protein product [Mus musculus] >dbj B... 134 2e-29
gb EDL24425.1 cDNA sequence BC048403, isoform CRA_b [Mus muscul 132 6e-29
ref XP_642387.1 hypothetical protein DDBDRAFT_0205477 [Dicty... 87.8 1e-15
emb CAJ08583.1 hypothetical protein, conserved [Leishmania majo 36.6 3.5

return to Functional Analysis

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