2gnx BlastP: Difference between revisions

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Latest revision as of 23:54, 11 June 2007

BLASTP 2.2.12 [Aug-07-2005]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.

Reference: Schäffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.

RID: 6T33UXG4012


Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects

          5,035,888 sequences; 1,742,339,864 total letters

If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports

Query= Length=445

Blastp.gif


Sequences producing significant alignments:

Score (Bits) E Value
ref XP_001163972.1 PREDICTED: similar to FLJ32549 protein [Pan 850 0.0
ref XP_001116860.1 PREDICTED: hypothetical protein isoform 1 [M 848 0.0
ref NP_689653.3 hypothetical protein LOC144577 [Homo sapiens... 847 0.0
gb AAH36246.1 FLJ32549 protein [Homo sapiens] 846 0.0
ref XP_001116875.1 PREDICTED: hypothetical protein isoform 3 [M 843 0.0
ref XP_531657.2 PREDICTED: hypothetical protein XP_531657 [Cani 827 0.0
ref XP_615557.3 PREDICTED: hypothetical protein [Bos taurus] 823 0.0
gb EDL24424.1 cDNA sequence BC048403, isoform CRA_a [Mus muscul 803 0.0
ref NP_766610.2 hypothetical protein LOC270802 [Mus musculus... 803 0.0
ref XP_576234.2 PREDICTED: hypothetical protein [Rattus norv... 802 0.0
ref XP_001364942.1 PREDICTED: hypothetical protein [Monodelphis 797 0.0
ref XP_416063.1 PREDICTED: hypothetical protein [Gallus gallus] 796 0.0
dbj BAC39804.1 unnamed protein product [Mus musculus] 760 0.0
ref XP_001116868.1 PREDICTED: hypothetical protein isoform 2 [M 743 0.0
ref NP_001085035.1 hypothetical protein LOC432102 [Xenopus l... 697 0.0
ref NP_001025261.1 hypothetical protein LOC555715 [Danio rer... 665 0.0
ref NP_001076454.1 hypothetical protein LOC100005809 [Danio ... 661 0.0
ref XP_001331282.1 PREDICTED: hypothetical protein [Danio rerio 598 2e-169
emb CAG12393.1 unnamed protein product [Tetraodon nigroviridis] 593 8e-168
pdb 2GNX A Chain A, X-Ray Structure Of A Hypothetical Protein... 554 3e-156
dbj BAE41440.1 unnamed protein product [Mus musculus] 508 2e-142
ref NP_001038719.1 hypothetical protein LOC692281 [Danio rer... 357 1e-96
ref XP_624797.1 PREDICTED: hypothetical protein [Apis mellifera 235 3e-60
ref XP_974676.1 PREDICTED: hypothetical protein [Tribolium cast 232 5e-59
ref XP_001193974.1 PREDICTED: hypothetical protein [Strongyloce 208 5e-52
ref XP_797380.2 PREDICTED: hypothetical protein, partial [St... 207 2e-51
dbj BAE37112.1 unnamed protein product [Mus musculus] >dbj B... 134 2e-29
gb EDL24425.1 cDNA sequence BC048403, isoform CRA_b [Mus muscul 132 6e-29
ref XP_642387.1 hypothetical protein DDBDRAFT_0205477 [Dicty... 87.8 1e-15
emb CAJ08583.1 hypothetical protein, conserved [Leishmania majo 36.6 3.5

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