2gnx Discussion

The structural analysis of the 2GNX protein did not produce any significant matches upon submission to the Dali database. Therefore, a separate analysis of the N-terminal domain and C-terminal domain of the protein was carried out. Results from these analyses showed us that there were no significant matches to the N-terminal domain of our protein. Much research and analysis into the closest search results generated by the Dali database was carried out using various resources, however none of these resources was able to identify these results as structural matches. It was then concluded that much more thorough research and analysis has to be done in order to identify the structure of the N-terminal domain of our protein.

However, an analysis of the C-terminal domain of our protein using the Dali database was able to provide us with some significant structural matches, of high interest being the GAF signalling protein. A CE analysis then confirmed that the structure of the GAF protein did indeed match closely to the C-terminal domain of our protein. A Pymol analysis