ATP binding domain 4 References
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Horiike, T., Hamada, K., Kanaya, S. and Shinozawa, T. (2001). 'Origin of Eukaryotic Cell Nuclei by Symbiosis of Archaea in Bacteria is Revealed By Homology-hit Analysis.' Nature Cell Biology 3: 210-214. Katz, L.A.(1998). 'Changing Perspectives On The Origin of Eukaryotes.' Trends in Ecology and Evolution 1998, 13: 493-497.
Krissinel, E and Henrick, K. (2004). ‘Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions.’ Acta Cryst. D60:2256-2268.
Laskowski, R. A., N. M. Luscombe, et al. (1996). ‘Protein clefts in molecular recognition and function.’Protein Sci 5(12): 2438-52.
Lemke, C, T. and Howell, P.L. (2001). ‘The 1.6A Crystal Structure of E.coli Argininosuccinate Synthetase Suggests a Confomational Change during Catalysis.’ Structure 9:1153-1164.
Liang, J., H. Edelsbrunner, et al. (1998). ‘Anatomy of protein pockets and cavities: measurement of binding site geometry and implications for ligand design.’Protein Sci 7(9): 1884-97.
Pal, D., Suhnel, J. and Weiss, M.S. (2002). ‘New principles of protein structure: nests, eggs - and what next?’ Angew. Chem. Int. Ed. 41:4663-4665.
Watson, J.D. and Milner-White, E.J. (2002). ‘A novel main-chain anion-binding site in proteins: the nest. A particular combination of phi,psi values in successive residues gives rise to anion-binding sites that occur commonly and are found often at functionally important regions.’ J. Mol. Biol. 315:171-82.
Watson, J.D. and Milner-White, E.J. (2002). ‘The conformations of polypeptide chains where the main-chain parts of successive residues are enantiomeric. Their occurrence in cation and anion-binding regions of proteins.’ J. Mol. Biol. 315:183-191.
Abstract|
Introductions|
Methods|
Structural Analysis|
Functional Analysis|
Evolutionary Analysis|
Discussions|
Conclusion |
References
