CLUSTAL X: Difference between revisions

From MDWiki
Jump to navigationJump to search
No edit summary
No edit summary
Line 5: Line 5:
NKxD motif N-terminal of Walker A motif.
NKxD motif N-terminal of Walker A motif.


[[Image:WalkerAB.jpg]]
[[Image:WalkerAB2.jpg]]


From left to right (N-terminal to C-terminal), Walker A motif (consensus GxxxxGK[ST]), conserved Threonine in-between Walker A and Walker B, and the Walker B motif (consensus DxPG).
From left to right (N-terminal to C-terminal), Walker A motif (consensus GxxxxGK[ST]), conserved Threonine in-between Walker A and Walker B, and the Walker B motif (consensus DxPG).


NKxD and Walker B motifs specify utilisation of GTP.  Circular permutation of NKxD to N-terminus characteristic of GTPases of the Ylqf/YawG family.  Suspected functional role in ribosomal assembly (Leipe, D. et. al. 2002).
NKxD and Walker B motifs specify utilisation of GTP.  Circular permutation of NKxD to N-terminus characteristic of GTPases of the Ylqf/YawG family.  Suspected functional role in ribosomal assembly (Leipe, D. et. al. 2002).

Revision as of 04:45, 11 June 2007

CLUSTAL X results of MSA

NKxD4.jpg

NKxD motif N-terminal of Walker A motif.

WalkerAB2.jpg

From left to right (N-terminal to C-terminal), Walker A motif (consensus GxxxxGK[ST]), conserved Threonine in-between Walker A and Walker B, and the Walker B motif (consensus DxPG).

NKxD and Walker B motifs specify utilisation of GTP. Circular permutation of NKxD to N-terminus characteristic of GTPases of the Ylqf/YawG family. Suspected functional role in ribosomal assembly (Leipe, D. et. al. 2002).