E. coli genomes

E. coli/Shigella genomes

Downloaded 14/5/09

 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_UTI89/NC_007946.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_APEC_O1/NC_008563.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_536/NC_008253.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110/AC_000091.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_CFT073/NC_004431.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_E24377A/NC_009801.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_HS/NC_009800.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_K_12_substr__MG1655/NC_000913.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_O157H7/NC_002695.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_O157H7_EDL933/NC_002655.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_sonnei_Ss046/NC_007384.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_flexneri_5_8401/NC_008258.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_flexneri_2a_2457T/NC_004741.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_flexneri_2a/NC_004337.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_dysenteriae/NC_007606.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_boydii_Sb227/NC_007613.gbk

 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_0127_H6_E2348_69/NC_011601.gbk

 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_55989/NC_011748.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_C_ATCC_8739/NC_010468.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_ED1a/NC_011745.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_IAI1/NC_011741.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_IAI39/NC_011750.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_K_12_substr__DH10B/NC_010473.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_O157_H7_EC4115/NC_011353.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_S88/NC_011742.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_SE11/NC_011415.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_SMS_3_5/NC_010498.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_UMN026/NC_011751.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_boydii_CDC_3083_94/NC_010658.gbk

 mv NC_007946.gbk Ec_UTI89.gbk 
 mv NC_008563.gbk Ec_APEC_O1.gbk  
 mv NC_008253.gbk Ec_536.gbk
 mv AC_000091.gbk Ec_W3110.gbk
 mv NC_004431.gbk Ec_CFT073.gbk
 mv NC_009801.gbk Ec_24377A.gbk
 mv NC_009800.gbk Ec_HS.gbk
 mv NC_000913.gbk Ec_K12.gbk
 mv NC_002695.gbk Ec_O157_Sakai.gbk
 mv NC_002655.gbk Ec_O157_EDL933.gbk
 mv NC_007384.gbk Ss_Ss046.gbk
 mv NC_008258.gbk Sf_5_8401.gbk
 mv NC_004741.gbk Sf_2a_2457T.gbk
 mv NC_004337.gbk Sf_2a_301.gbk
 mv NC_007606.gbk Sd_Sd197.gbk
 mv NC_007613.gbk Sb_Sb227.gbk

 mv NC_011601.gbk Ec_2348_69.gbk

 mv NC_011748.gbk Ec_55989.gbk
 mv NC_010468.gbk Ec_C_ATCC_8739.gbk
 mv NC_011745.gbk Ec_ED1a.gbk
 mv NC_011741.gbk Ec_IAI1.gbk
 mv NC_011750.gbk Ec_IAI39.gbk
 mv NC_010473.gbk Ec_DH10B.gbk
 mv NC_011353.gbk Ec_EC4115.gbk
 mv NC_011742.gbk Ec_S88.gbk
 mv NC_011415.gbk Ec_SE11.gbk
 mv NC_010498.gbk Ec_SMS_3_5.gbk 
 mv NC_011751.gbk Ec_UMN026.gbk
 mv NC_010658.gbk Sb_CDC_3083_94.bk

 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_536/NC_008253.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_55989/NC_011748.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_APEC_O1/NC_008563.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_C_ATCC_8739/NC_010468.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_CFT073/NC_004431.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_0127_H6_E2348_69/NC_011601.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_E24377A/NC_009801.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_ED1a/NC_011745.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_HS/NC_009800.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_IAI1/NC_011741.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_IAI39/NC_011750.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_O157H7_EDL933/NC_002655.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_O157H7/NC_002695.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_S88/NC_011742.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_SE11/NC_011415.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_SMS_3_5/NC_010498.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_UMN026/NC_011751.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_UTI89/NC_007946.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_K_12_substr__MG1655/NC_000913.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Escherichia_coli_K_12_substr__W3110/AC_000091.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_boydii_CDC_3083_94/NC_010658.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_boydii_Sb227/NC_007613.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_dysenteriae/NC_007606.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_flexneri_2a_2457T/NC_004741.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_flexneri_2a/NC_004337.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_flexneri_5_8401/NC_008258.gbk
 wget ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Shigella_sonnei_Ss046/NC_007384.gbk