Hypothetical protein References: Difference between revisions

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'''Function'''
'''Function'''


Turner M, Woodberry T, Hafner L.M, & Giffard P.M, 1999, ‘The bspA Locus of Lactobacillus fermentum BR11 Encodes an L-Cystine Uptake System’, Journal of Bacteriology, vol 181, no.7, pp. 2192-2198.
[4]Turner, M., Woodberry, T., Hafner L.M., & Giffard, P.M., (1999), The bspA Locus of Lactobacillus fermentum BR11 Encodes an L-Cystine Uptake System, ''Journal of Bacteriology'', '''181(7)''': 2192-2198.


J Biol Chem, Vol. 274, Issue 20, 14006-14011, May 14, 1999
[5]Ryu, K.S., Kim, C., Kim, I., Yoo, S., Choi, B.S. and Park, C. (2004) NMR Application Probes a Novel and Ubiquitous Family of Enzymes That Alter Monosaccharide Configuration.  ''J. Biol. Chem.'', '''279(17)''': 25544-25548.
A Mutated PtsG, the Glucose Transporter, Allows Uptake of D-Ribose*
Hyangee Oh, Yongkyu Park, and Chankyu Park


 
[6]Park, D., Ryu, K.S., Choi, D., Kwak, J. and Park, C. (2007) Characterization and role of fucose mutarotase in mammalian cells. ''Glycobiology''. '''17(9)''':955-962
Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli RbsD, a component of the ribose-transport system with unknown biochemical function
Crystal Structures of RbsD Leading to the Identification of Cytoplasmic Sugar-binding Proteins with a Novel Folding Architecture
Min-Sung Kim,a Hyangee Oh,b Chankyu Parkb and Byung-Ha Oha*
 
 
NMR Application Probes a Novel and Ubiquitous Family of Enzymes That Alter Monosaccharide Configuration*
 
Kyoung-Seok Ryu, Changhoon Kim, Insook Kim, Seokho Yoo, Byong-Seok Choi, and Chankyu Park
 
 
Ribose Utilization with an Excess of Mutarotase Causes Cell Death Due to Accumulation of Methylglyoxal
 
Insook Kim,1 Eunjung Kim,1 Seokho Yoo,1 Daesung Shin,1 Bumchan Min,2 Jeeyeon Song,1 and Chankyu Park1*
 
 
==possible Refs==
 
Structural insights into the monosaccharide specificity of Escherichia coli rhamnose mutarotase.
 
NMR application probes a novel and ubiquitous family of enzymes that alter monosaccharide configuration.
 
Crystal structures of RbsD leading to the identification of cytoplasmic sugar-binding proteins with a novel folding architecture.
 
Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli RbsD, a component of the ribose-transport system with unknown biochemical function
 
Ribose utilization in Lactobacillus sakei: analysis of the regulation of the rbs operon and putative involvement of a new transporter.
 
ABC-ATPases, adaptable energy generators fuelling transmembrane movement of a variety of molecules in organisms from bacteria to humans.
 
Molecular interactions in ribose transport: the binding protein module symmetrically associates with the homodimeric membrane transporter.
 
A mutated PtsG, the glucose transporter, allows uptake of D-ribose.
 
A comparative analysis of ABC transporters in complete microbial genomes.
 
 
Characterization and role of fucose mutarotase in mammalian cells




Revision as of 00:25, 16 June 2009

REFERENCES

Evolution:

[1] Thompson, J.D., Higgins, D.G. and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignments through sequence weighting, position specific gap penalties and weight matrix choice. Nucl. Acids Res. 22: 4673-4680.

[2] Tamura, K., Dudley, J., Nei, M. and Kumar, S. (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.

[3] Strimmer, K. and von Haeseler, A. (1996) Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13: 964-969

Function

[4]Turner, M., Woodberry, T., Hafner L.M., & Giffard, P.M., (1999), The bspA Locus of Lactobacillus fermentum BR11 Encodes an L-Cystine Uptake System, Journal of Bacteriology, 181(7): 2192-2198.

[5]Ryu, K.S., Kim, C., Kim, I., Yoo, S., Choi, B.S. and Park, C. (2004) NMR Application Probes a Novel and Ubiquitous Family of Enzymes That Alter Monosaccharide Configuration. J. Biol. Chem., 279(17): 25544-25548.

[6]Park, D., Ryu, K.S., Choi, D., Kwak, J. and Park, C. (2007) Characterization and role of fucose mutarotase in mammalian cells. Glycobiology. 17(9):955-962


Abstract | Introduction | Method | Results | Discussion | Conclusion | References


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