References - 2qgnA

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  • DeLano, W.L. The PyMOL Molecular Graphics System (2002) DeLano Scientific, San Carlos, CA, USA.
  • Golovko, A., G. Hjalm, et al. (2000). "Cloning of a human tRNA isopentenyl transferase." Gene 258(1-2): 85-93.
  • Holm, L. and C. Sander (1997). "Dali/FSSP classification of three-dimensional protein folds." Nucleic Acids Res 25(1): 231-4.
  • Hopper, A. K. and E. M. Phizicky (2003). "tRNA transfers to the limelight." Genes Dev 17(2): 162-80.
  • Kohli, D. K. and A. K. Bachhawat (2003). "CLOURE: Clustal Output Reformatter, a program for reformatting ClustalX/ClustalW outputs for SNP analysis and molecular systematics." Nucleic Acids Res 31(13): 3501-2.
  • Laskowski, R. A., N. M. Luscombe, et al. (1996). "Protein clefts in molecular recognition and function." Protein Sci 5(12): 2438-52.
  • Laskowski, R. A., J. D. Watson, et al. (2005). "ProFunc: a server for predicting protein function from 3D structure." Nucleic Acids Res 33(Web Server issue): W89-93.
  • Liang, J., H. Edelsbrunner, et al. (1998). "Anatomy of protein pockets and cavities: measurement of binding site geometry and implications for ligand design." Protein Sci 7(9): 1884-97.
  • Martin N.A. and Hopper A.K. (1994). How single genes provide tRNA processing enzymes to mitochondria,nuclei and the cytosol. Biochimie 76 : 1161-1167
  • Martinsen, E. S., S. L. Perkins, et al. (2008). "A three-genome phylogeny of malaria parasites (Plasmodium and closely related genera): evolution of life-history traits and host switches." Mol Phylogenet Evol 47(1): 261-73.
  • Nesbo, C. L., Y. Boucher, et al. (2001). "Defining the core of nontransferable prokaryotic genes: the euryarchaeal core." J Mol Evol 53(4-5): 340-50.
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  • Shi, J., T. L. Blundell, et al. (2001). "FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties." J Mol Biol 310(1): 243-57.
  • Voyich, J. M., D. E. Sturdevant, et al. (2008). "Analysis of Staphylococcus aureus gene expression during PMN phagocytosis." Methods Mol Biol 431: 109-22.
  • Xie et al., (2007). Structure of tRNA dimethylallyltransferase: RNA modification through a channel. J. Mol. Biol. 367, 872–881
  • Zharkikh, A. and W. H. Li (1992). "Statistical properties of bootstrap estimation of phylogenetic variability from nucleotide sequences. I. Four taxa with a molecular clock." Mol Biol Evol 9(6): 1119-47.