Structure Protein: Difference between revisions

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== Protein families ==
== Protein families ==
has 2 domains:
[http://www.sanger.ac.uk/cgi-bin/Pfam/getblast?id=213IkB798070U83996982 Pfam at Sanger]
[http://www.sanger.ac.uk/cgi-bin/Pfam/getblast?id=213IkB798070U83996982 Pfam at Sanger]


[[alignment with Pfam-B_15198]]
[[alignment with Pfam-B_15198]]

Revision as of 06:44, 22 May 2007

protein sequence (FASTA)

>gi|118138356|pdb|2IFU|A Chain A, Crystal Structure Of A Gamma-Snap From Danio Rerio AIAAQKISEAHEHIAKAEKYLKTSFXKWKPDYDSAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNR SLFHAAKAFEQAGXXLKDLQRXPEAVQYIEKASVXYVENGTPDTAAXALDRAGKLXEPLDLSKAVHLYQQ AAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSXYKEXENYPTCYKKCIAQVLVQLHRAD YVAAQKCVRESYSIPGFSGSEDCAALEDLLQAYDEQDEEQLLRVCRSPLVTYXDNDYAKLAISLKVPGGG GGKKKPSASASAQPQEEEDDEYAGGLC


Strutural comparisons

SNAP-GAMMA DALI

snap-gamma: multiple structure alignment

Snap-gamma: sequence alignment with 1QQE:A


Protein families

has 2 domains: Pfam at Sanger


alignment with Pfam-B_15198