Dali analysis
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multiple sequence alignment of 2gnx, 2cmr, lj32 and lf5m
FSSP FAMILIES OF STRUCTURALLY SIMILAR PROTEINS, VERSION 1.0 (Apr 1 1995) CREATED Tue May 8 05:22:25 BST 2007 for dali on s030-013.ebi.ac.uk METHOD Dali ver. 2.0: Holm, L., Sander, C. (1993) J.Mol.Biol. 233,123-138 DATABASE 8969 protein chains PDBID 3023-A HEADER COMPND SOURCE AUTHOR SEQLENGTH 280 NALIGN 197 WARNING pairs with Z<2.0 are structurally dissimilar
- SUMMARY: PDB/chain identifiers and structural alignment statistics
NR. STRID1 STRID2 Z RMSD LALI LSEQ2 %IDE REVERS PERMUT NFRAG TOPO PROTEIN 1: 3023-A 2gnx-A 42.9 0.0 280 280 100 0 0 1 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 2: 3023-A 2cmr-A 5.7 3.5 114 192 11 0 0 11 S IMMUNOGLOBULIN COMPLEX d5 (fab heavy chain) d5 (fab li 3: 3023-A 1j3w-A 5.7 3.2 99 134 12 0 0 9 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION giding protein-m 4: 3023-A 1jmr-A 5.5 3.0 94 246 9 0 0 12 S 5: 3023-A 1f5m-B 5.5 5.0 107 177 9 0 0 13 S SIGNALING PROTEIN gaf (saccharomyces cerevisiae) yeas 6: 3023-A 1vcs-A 5.0 4.7 82 102 9 0 0 8 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION vesicle transpor 7: 3023-A 1kt0-A 4.9 2.8 81 357 6 0 0 7 S ISOMERASE 51 kda fk506-binding protein (fkbp51) Mutant 8: 3023-A 1e2a-A 4.9 4.5 80 102 9 0 0 6 S TRANSFERASE enzyme iia (enzyme iii, lactose-specific i 9: 3023-A 2d2s-A 4.8 3.1 75 217 11 0 0 5 S ENDOCYTOSIS/EXOCYTOSIS exocyst complex component exo84 10: 3023-A 2oew-A 4.7 2.8 119 358 8 0 0 12 S PROTEIN TRANSPORT programmed cell death 6-interacting 11: 3023-A 1h3q-A 4.7 4.2 92 140 4 0 0 11 S TRANSPORT sedlin (sedl) (mus musculus) mouse S.B.Jan 12: 3023-A 2oev-A 4.5 36.5 151 697 7 0 0 14 S PROTEIN TRANSPORT programmed cell death 6-interacting 13: 3023-A 2cwy-A 4.5 2.4 82 92 20 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 14: 3023-A 2c5i-T 4.5 2.8 75 93 11 0 0 5 S PROTEIN TRANSPORT/COMPLEX t-snare affecting a late gol 15: 3023-A 3nul 4.4 3.4 93 130 5 0 0 11 S ACTIN-BINDING PROTEIN profilin i (arabidopsis thalian 16: 3023-A 2h7o-A 4.4 3.0 81 270 5 0 0 7 S SIGNALING PROTEIN protein kinase ypka fragment (protei 17: 3023-A 1mc0-A 4.4 13.3 144 341 9 0 0 17 S HYDROLASE 3',5'-cyclic nucleotide phosphodiesterase 2a 18: 3023-A 2ijp-A 4.3 4.2 117 217 13 0 0 12 S SIGNALING PROTEIN 14-3-3 protein (cryptosporidium par 19: 3023-A 2h7v-C 4.3 4.2 76 269 13 0 0 5 S SIGNALING PROTEIN migration-inducing protein 5 (ras-re 20: 3023-A 2cbi-A 4.3 4.3 123 584 7 0 0 13 S HYDROLASE hyaluronidase fragment expression_system_ve 21: 3023-A 1hg5-A 4.3 3.2 85 263 9 0 0 6 S ENDOCYTOSIS clathrin assembly protein short form frag 22: 3023-A 2dnx-A 4.2 4.9 80 130 6 0 0 6 S TRANSPORT PROTEIN syntaxin-12 fragment (homo sapiens) 23: 3023-A 1a17 4.2 5.0 85 159 4 0 0 8 S HYDROLASE serineTHREONINE PROTEIN PHOSPHATASE 5 fragme 24: 3023-A 2if4-A 4.1 2.5 82 258 7 0 0 7 S SIGNALING PROTEIN atfkbp42 fragment (twd1 (twisted dwa 25: 3023-A 1owa-A 4.0 3.3 76 156 12 0 0 6 S CYTOKINE spectrin alpha chain, erythrocyte fragment (e 26: 3023-A 1br0-A 4.0 3.5 79 120 13 0 0 6 S MEMBRANE PROTEIN syntaxin 1-a fragment Mutant (rattus 27: 3023-A 1xdo-A 3.9 3.5 83 686 10 0 0 8 S TRANSFERASE polyphosphate kinase (ppk, polyphosphoric 28: 3023-A 1vls 3.9 3.6 77 146 10 0 0 7 S CHEMOTAXIS aspartate receptor (tar) biological_unit ( 29: 3023-A 1sjj-A 3.9 7.9 114 863 4 0 0 14 S CONTRACTILE PROTEIN actinin (gallus gallus) chicken 30: 3023-A 2iak-A 3.8 2.4 68 197 6 0 0 5 S CELL ADHESION bullous pemphigoid antigen 1, isoform 5 31: 3023-A 2dl1-A 3.8 4.1 86 116 3 0 0 7 S PROTEIN TRANSPORT spartin fragment (trans-activated by 32: 3023-A 2h28-A 3.7 2.8 75 106 8 0 0 10 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 33: 3023-A 2cwo-A 3.7 3.3 83 165 5 0 0 10 S RNA BINDING PROTEIN RNA silencing suppressor (p21) (b 34: 3023-A 2hj9-C 3.6 3.4 80 210 5 0 0 10 S SIGNALING PROTEIN autoinducer 2-binding periplasmic pr 35: 3023-A 2gsc-A 3.6 3.7 74 113 12 0 0 5 S UNKNOWN FUNCTION conserved hypothetical protein (conse 36: 3023-A 2cpt-A 3.6 4.0 78 117 12 0 0 5 S PROTEIN TRANSPORT vacuolar sorting protein 4b fragment 37: 3023-A 1v9d-A 3.6 4.4 83 308 5 0 0 6 S PROTEIN BINDING diaphanous protein homolog 1 fragment 38: 3023-A 2i0m-A 3.5 4.5 113 207 10 0 0 13 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION phosphate transp 39: 3023-A 2hje-A 3.5 3.2 84 210 7 0 0 11 S SIGNALING PROTEIN autoinducer 2 sensor kinasePHOSPHATA 40: 3023-A 2dmw-A 3.5 3.3 85 131 7 0 0 11 S MEMBRANE PROTEIN synaptobrevin-like 1 variant fragment 41: 3023-A 2bkp-A 3.5 3.3 84 193 7 0 0 8 S HYPOTHETICAL PROTEIN hypothetical protein ph0236 (pyr 42: 3023-A 1zu2-A 3.5 5.2 73 158 5 0 0 6 S TRANSPORT PROTEIN mitochondrial import receptor subuni 43: 3023-A 1y79-1 3.5 3.1 93 680 4 0 0 10 S HYDROLASE peptidyl-dipeptidase dcp (dipeptidyl carboxy 44: 3023-A 2fup-A 3.4 2.9 80 126 9 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 45: 3023-A 2iub-A 3.3 4.7 79 331 11 0 0 5 S MEMBRANE PROTEIN divalent cation transport-related pro 46: 3023-A 2e9x-D 3.3 2.5 66 197 3 0 0 6 S REPLICATION DNA replication complex gins protein psf1 47: 3023-A 2bkn-A 3.3 3.3 80 190 6 0 0 5 S MEMBRANE PROTEIN hypothetical protein ph0236 (pyrococ 48: 3023-A 2avx-A 3.3 3.7 94 171 5 0 0 10 S TRANSCRIPTION regulatory protein sdia Mutant (escheri 49: 3023-A 1u89-A 3.3 3.1 77 139 4 0 0 6 S STRUCTURAL PROTEIN talin 1 fragment (talin) (mus musc 50: 3023-A 1qqt-A 3.3 3.4 84 546 7 0 0 6 S LIGASE methionyl-trna synthetase fragment (escherichi 51: 3023-A 1qqe-A 3.3 7.4 94 281 6 0 0 10 S PROTEIN TRANSPORT vesicular transport protein sec17 Mu 52: 3023-A 2j3t-C 3.2 5.2 83 141 7 0 0 8 S PROTEIN TRANSPORT trafficking protein particle complex 53: 3023-A 1uur-A 3.2 3.2 84 460 7 0 0 7 S SIGNAL TRANSDUCTION stat protein fragment (dictyostel 54: 3023-A 1tkn-A 3.2 3.8 75 110 13 0 0 5 S MEMBRANE PROTEIN amyloid beta a4 protein (homo sapien 55: 3023-A 1qja-A 3.2 3.0 75 217 5 0 0 8 S COMPLEX (SIGNAL TRANSDUCTION/PEPTIDE) 14-3-3 protein z 56: 3023-A 1ek8-A 3.2 5.6 78 185 9 0 0 5 S TRANSLATION ribosome recycling factor (ribosome relea 57: 3023-A 2uv0-E 3.1 3.6 94 159 9 0 0 12 S TRANSCRIPTION transcriptional activator protein lasr ( 58: 3023-A 2nty-A 3.1 2.6 93 332 4 0 0 9 S SIGNALING PROTEIN emb|cab41934.1 fragment (prone8) rac 59: 3023-A 2hi7-B 3.1 2.6 77 134 5 0 0 8 S OXIDOREDUCTASE thiol:disulfide interchange protein dsb 60: 3023-A 2fez-A 3.1 3.6 104 373 10 0 0 12 S TRANSCRIPTION probable regulatory protein embr (mycob 61: 3023-A 2a73-B 3.1 3.2 91 976 11 0 0 13 S IMMUNE SYSTEM complement c3 fragment complement c3 fra 62: 3023-A 1uw4-B 3.1 3.3 86 247 12 0 0 12 S NONSENSE MEDIATED MRNA DECAY PROTEIN regulator of nons 63: 3023-A 1hx1-B 3.1 3.2 76 112 13 0 0 6 S CHAPERONE/CHAPERONE INHIBITOR heat shock cognate 71 k 64: 3023-A 1fpo-A 3.1 3.4 72 171 8 0 0 4 S CHAPERONE chaperone protein hscb (hsc20) Mutant (esc 65: 3023-A 2o8p-A 3.0 5.0 104 215 13 0 0 11 S SIGNALING PROTEIN 14-3-3 domain containing protein (c 66: 3023-A 2d9d-A 3.0 3.8 80 89 13 0 0 8 S CHAPERONE bag family molecular chaperone regulator 5 f 67: 3023-A 2ak6-A 3.0 5.7 93 153 8 0 0 11 S 68: 3023-A 1ya0-A 3.0 4.3 81 458 6 0 0 8 S SIGNALING PROTEIN smg-7 transcript variant 2 fragment 69: 3023-A 1x8z-A 3.0 3.2 75 151 9 0 0 3 S PROTEIN BINDING invertasePECTIN METHYLESTERASE INHIBIT 70: 3023-A 1qoy-A 3.0 7.5 121 303 14 0 0 9 S TOXIN hemolysin e (cytolysin a, silent hemolysin a, hl 71: 3023-A 1qgr-A 3.0 2.7 79 871 5 0 0 7 S TRANSPORT RECEPTOR importin beta subunit (karyopherin 72: 3023-A 1ocr-C 3.0 3.8 94 261 7 0 0 9 S OXIDOREDUCTASE cytochrome c oxidase (ferrocytochrome c 73: 3023-A 1fce 3.0 2.5 60 629 10 0 0 5 S CELLULASE DEGRADATION cellulase celf fragment (clostr 74: 3023-A 2nwb-A 2.9 3.8 88 379 6 0 0 10 S OXIDOREDUCTASE conserved domain protein (putative 2,3- 75: 3023-A 2i6h-A 2.9 3.8 92 176 10 0 0 12 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 76: 3023-A 1w5d-A 2.9 3.7 91 458 7 0 0 10 S HYDROLASE penicillin-binding protein (bacillus subtil 77: 3023-A 1sj7-A 2.9 5.5 77 167 10 0 0 5 S STRUCTURAL PROTEIN talin 1 fragment (mus musculus) mo 78: 3023-A 1ojg-A 2.9 3.5 83 135 8 0 0 8 S TRANSFERASE sensor protein dcus (dcus) fragment (esch 79: 3023-A 1i1i-P 2.9 3.6 100 665 7 0 0 10 S HYDROLASE neurolysin (rattus norvegicus) rat express 80: 3023-A 1dov-A 2.9 4.9 76 181 9 0 0 6 S CELL ADHESION alpha-catenin fragment (mus musculus) m 81: 3023-A 2grg-A 2.8 3.2 68 98 10 0 0 8 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 82: 3023-A 2bvl-A 2.8 3.6 90 543 14 0 0 9 S TOXIN toxin b fragment Mutant (clostridium difficile) 83: 3023-A 1z0p-A 2.8 1.6 51 73 4 0 0 2 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 84: 3023-A 1u6g-C 2.8 5.3 79 1146 6 0 0 9 S LIGASE cullin homolog 1 (cul-1) ring-box protein 1 (rb 85: 3023-A 1oj5-A 2.8 2.8 68 105 3 0 0 7 S TRANSCRIPTIONAL COACTIVATOR steroid receptor coactivat 86: 3023-A 1ecr-A 2.8 2.8 65 305 6 0 0 7 S COMPLEX (DNA-BINDING PROTEIN/DNA) replication terminat 87: 3023-A 1e25-A 2.8 4.6 92 278 7 0 0 9 S HYDROLASE extended-spectrum beta-lactamase per-1 Muta 88: 3023-A 1di1-A 2.8 4.4 72 290 4 0 0 5 S LYASE aristolochene synthase (sesquiterpene cyclase, 89: 3023-A 2p0n-A 2.7 3.1 80 157 10 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 90: 3023-A 2iiu-A 2.7 3.8 77 203 8 0 0 7 S STRUCTURAL GENOMICS/UNKNOWN FUNCTION hypothetical prot 91: 3023-A 2gom-A 2.7 2.4 54 61 6 0 0 5 S CELL ADHESION/TOXIN fibrinogen-binding protein fragmen 92: 3023-A 1z1w-A 2.7 4.3 98 780 5 0 0 12 S HYDROLASE tricorn protease interacting factor f3 (the 93: 3023-A 1h3n-A 2.7 3.6 76 813 14 0 0 6 S AMINOACYL-TRNA SYNTHETASE leucyl-trna synthetase (the 94: 3023-A 1bk5-A 2.7 3.0 71 422 7 0 0 8 S PROTEIN TRANSPORT karyopherin alpha fragment (importin 95: 3023-A 1aqt 2.7 1.7 47 135 0 0 0 2 S HYDROLASE atp synthase fragment Mutant (escherichia c 96: 3023-A 2nw9-A 2.6 6.4 102 265 9 0 0 11 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (xanthomona 97: 3023-A 2iml-A 2.6 2.5 59 188 8 0 0 4 S FLAVOPROTEIN hypothetical protein (archaeoglobus fulg 98: 3023-A 2e9x-A 2.6 1.3 53 144 6 0 0 2 S REPLICATION DNA replication complex gins protein psf1 99: 3023-A 2d4x-A 2.6 4.3 94 214 12 0 0 10 S STRUCTURAL PROTEIN flagellar hook-associated protein 3 100: 3023-A 2c0s-A 2.6 2.0 51 64 6 0 0 2 S TRANSFERASE conserved domain protein fragment (bacill 101: 3023-A 2avk-A 2.6 3.6 71 133 3 0 0 4 S OXYGEN STORAGE/TRANSPORT hemerythrin-like domain prote 102: 3023-A 2aaw-A 2.6 2.9 71 205 11 0 0 6 S TRANSFERASE glutathione s-transferase (plasmodium fal 103: 3023-A 1wp1-A 2.6 1.8 51 456 16 0 0 2 S MEMBRANE PROTEIN outer membrane protein oprm (drug-dis 104: 3023-A 1oxj-A 2.6 3.4 70 170 11 0 0 8 S RNA BINDING PROTEIN RNA-binding protein smaug fragment 105: 3023-A 1k8t-A 2.6 9.1 95 498 13 0 0 8 S TOXIN,LYASE calmodulin-sensitive adenylate cyclase ( 106: 3023-A 1h2s-B 2.6 3.7 51 60 6 0 0 1 S MENBRANE PROTEIN COMPLEX sensory rhodopsin ii fragment 107: 3023-A 1fp3-A 2.6 6.0 107 402 5 0 0 14 S ISOMERASE n-acyl-d-glucosamine 2-epimerase (sus scro 108: 3023-A 1fiy 2.6 2.9 63 873 8 0 0 6 S COMPLEX (LYASE/INHIBITOR) phosphoenolpyruvate carboxyl 109: 3023-A 1a32 2.6 2.1 54 85 11 0 0 3 S RIBOSOMAL PROTEIN ribosomal protein s15 (bacillus ste 110: 3023-A 2ors-A 2.5 8.6 46 290 9 0 0 6 S OXIDOREDUCTASE nitric oxide synthase, inducible fragme 111: 3023-A 2ibd-A 2.5 7.8 91 190 7 0 0 12 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION possible transcr 112: 3023-A 2fuq-A 2.5 2.4 61 746 15 0 0 6 S SUGAR BINDING PROTEIN heparinase ii protein (pedobact 113: 3023-A 2fh5-A 2.5 3.8 73 124 7 0 0 6 S TRANSPORT PROTEIN signal recognition particle receptor 114: 3023-A 1sz9-A 2.5 2.6 74 143 9 0 0 7 S TRANSCRIPTION pcf11 protein fragment (saccharomyces c 115: 3023-A 1rkc-A 2.5 5.2 76 258 11 0 0 7 S CELL ADHESION, STRUCTURAL PROTEIN vinculin fragment ta 116: 3023-A 1nkd 2.5 2.0 51 59 2 0 0 2 S TRANSCRIPTION REGULATION rop (cole1 repressor of prime 117: 3023-A 1mwr-A 2.5 14.8 125 609 7 0 0 18 S BIOSYNTHETIC PROTEIN penicillin-binding protein 2a (sa 118: 3023-A 1ee4-A 2.5 3.0 71 423 7 0 0 8 S TRANSPORT PROTEIN karyopherin alpha fragment (serine-r 119: 3023-A 2p61-A 2.4 4.4 85 114 8 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 120: 3023-A 2ntx-A 2.4 6.7 107 300 7 0 0 11 S SIGNALING PROTEIN emb|cab41934.1 fragment (prone8) (a 121: 3023-A 2jbw-A 2.4 4.2 69 348 9 0 0 7 S HYDROLASE 2,6-dihydroxy-pseudo-oxynicotine hydrolase ( 122: 3023-A 2jbr-A 2.4 7.7 84 399 6 0 0 9 S OXIDOREDUCTASE p-hydroxyphenylacetate hydroxylase c2 o 123: 3023-A 2bg3-A 2.4 4.0 105 468 7 0 0 12 S 124: 3023-A 1yw0-A 2.4 4.9 96 238 7 0 0 9 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (xanthomona 125: 3023-A 1yoz-A 2.4 4.3 66 113 8 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 126: 3023-A 1y64-B 2.4 3.6 81 411 9 0 0 7 S STRUCTURAL PROTEIN actin, alpha skeletal muscle (alpha 127: 3023-A 1xzp-A 2.4 3.0 77 456 9 0 0 6 S HYDROLASE probable trna modification gtpase trme (trme 128: 3023-A 1v7v-A 2.4 4.3 73 779 7 0 0 10 S TRANSFERASE chitobiose phosphorylase (vibrio proteoly 129: 3023-A 1tf4-A 2.4 4.3 97 605 6 0 0 12 S GLYCOSYL HYDROLASE t. fusca endoEXO-CELLULASE E4 CATAL 130: 3023-A 1qvr-A 2.4 1.5 49 803 12 0 0 3 S CHAPERONE clpb protein (thermus thermophilus) bacteri 131: 3023-A 1pn1-A 2.4 6.6 83 176 14 0 0 10 S 132: 3023-A 1k34-A 2.4 3.1 50 60 4 0 0 4 S VIRUS/VIRAL PROTEIN transmembrane glycoprotein gp41 f 133: 3023-A 1fof-A 2.4 3.7 96 246 4 0 0 11 S HYDROLASE beta lactamase oxa-10 (oxa-10) (pseudomona 134: 3023-A 1e96-B 2.4 4.1 84 184 10 0 0 9 S SIGNALLING COMPLEX ras-related c3 botulinum toxin sub 135: 3023-A 1a0f-A 2.4 2.4 63 201 5 0 0 5 S TRANSFERASE glutathione s-transferase fragment (gst, g 136: 3023-A 2ooe-A 2.3 3.2 60 528 5 0 0 6 S STRUCTURAL PROTEIN cleavage stimulation factor 77 kda 137: 3023-A 2nr5-A 2.3 2.7 46 56 2 0 0 4 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 138: 3023-A 2ig1 2.3 3.9 73 507 8 0 0 4 S 139: 3023-A 2i68-A 2.3 3.2 45 78 2 0 0 6 S TRANSPORT PROTEIN protein emre (methyl viologen resist 140: 3023-A 2gyq-A 2.3 5.4 76 162 1 0 0 4 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION ycfi, putative s 141: 3023-A 1zrl-A 2.3 3.1 70 583 3 0 0 5 S CELL INVASION erythrocyte binding antigen region ii (e 142: 3023-A 1xmf-E 2.3259.4 68 166 6 0 0 6 S OXIDOREDUCTASE methane monooxygenase component a alpha 143: 3023-A 1x0t-A 2.3 3.2 64 106 8 0 0 6 S HYDROLASE ribonuclease p protein component 4 (ribonucl 144: 3023-A 1nfn 2.3 5.7 78 132 8 0 0 7 S LIPID TRANSPORT apolipoprotein e3 fragment (homo sapi 145: 3023-A 1kqf-C 2.3 4.3 86 216 7 0 0 7 S OXIDOREDUCTASE formate dehydrogenase, nitrate-inducibl 146: 3023-A 1eem-A 2.3 3.5 71 237 6 0 0 6 S TRANSFERASE glutathione-s-transferase (homo sapiens) 147: 3023-A 1c17-M 2.3 7.3 81 142 6 0 0 7 S MEMBRANE PROTEIN atp synthase subunit c atp synthase s 148: 3023-A 1b3q-A 2.3 3.1 62 368 8 0 0 6 S TRANSFERASE chemotaxis protein chea fragment Mutant ( 149: 3023-A 1a36-A 2.3 1.8 51 544 0 0 0 2 S COMPLEX (ISOMERASE/DNA) topoisomerase i fragment Mutan 150: 3023-A 2ot3-A 2.2 4.7 64 253 8 0 0 4 S PROTEIN TRANSPORT rab5 gdpGTP EXCHANGE FACTOR fragment 151: 3023-A 2oo2-A 2.2 1.7 46 76 4 0 0 1 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 152: 3023-A 2oer-A 2.2 5.1 82 178 7 0 0 8 S TRANSCRIPTION probable transcriptional regulator (pse 153: 3023-A 2nw8-A 2.2 7.4 98 266 11 0 0 8 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (xanthomona 154: 3023-A 2nw7-A 2.2 6.5 102 259 11 0 0 10 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (xanthomona 155: 3023-A 2nox-A 2.2 8.6 106 261 7 0 0 8 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (ralstonia 156: 3023-A 2i9c-A 2.2 3.7 64 117 6 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 157: 3023-A 2hh7-A 2.2 4.9 68 85 4 0 0 7 S UNKNOWN FUNCTION hypothetical protein csor (mycobacte 158: 3023-A 2hfi-A 2.2 4.6 78 123 9 0 0 9 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 159: 3023-A 2fm8-C 2.2 5.4 65 220 6 0 0 4 S CHAPERONE/CELL INVASION surface presentation of antige 160: 3023-A 2caz-A 2.2 1.6 48 58 2 0 0 2 S PROTEIN TRANSPORT suppressor protein stp22 of temperat 161: 3023-A 2c5w-B 2.2 4.2 97 385 3 0 0 11 S PEPTIDOGLYCAN SYNTHESIS penicillin-binding protein 1a 162: 3023-A 1zke-A 2.2 1.6 51 81 4 0 0 2 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 163: 3023-A 1zee-A 2.2 3.2 75 356 9 0 0 7 S UNKNOWN FUNCTION hypothetical protein so4414 (shewane 164: 3023-A 1yax-A 2.2 2.7 66 153 6 0 0 8 S TRANSFERASE, SIGNALING PROTEIN virulence sensor protei 165: 3023-A 1xu5-E 2.2 78.8 68 166 6 0 0 6 S OXIDOREDUCTASE methane monooxygenase component a alpha 166: 3023-A 1wvt-A 2.2 3.7 77 147 12 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 167: 3023-A 1wa5-C 2.2 3.2 75 937 8 0 0 9 S NUCLEAR TRANSPORT/COMPLEX gtp-binding nuclear protein 168: 3023-A 1vmg-A 2.2 1.8 49 80 4 0 0 1 S HYDROLASE hypothetical protein sso3215 (sulfolobus so 169: 3023-A 1t9y-A 2.2 2.7 50 1016 4 0 0 3 S MEMBRANE PROTEIN acriflavine resistance protein b Muta 170: 3023-A 1t98-A 2.2 3.0 76 261 13 0 0 10 S CELL CYCLE chromosome partition protein mukf fragment 171: 3023-A 1qaz-A 2.2 3.4 80 351 10 0 0 9 S LYASE alginate lyase a1-iii biological_unit (sphingom 172: 3023-A 1q0d-A 2.2 3.6 70 117 11 0 0 6 S OXIDOREDUCTASE superoxide dismutase [ni] (nickel-conta 173: 3023-A 1k8k-G 2.2 2.8 65 138 6 0 0 8 S STRUCTURAL PROTEIN actin-like protein 3 (arp3) actin- 174: 3023-A 1fft-C 2.2 4.2 80 185 6 0 0 6 S OXIDOREDUCTASE ubiquinol oxidase ubiquinol oxidase ub 175: 3023-A 1a87 2.2 9.9 61 297 10 0 0 5 S BACTERIOCIN colicin n fragment (escherichia coli) I. 176: 3023-A 2ib0-A 2.1 10.1 83 142 2 0 0 8 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION conserved hypoth 177: 3023-A 2hbk-A 2.1 3.8 46 390 11 0 0 8 S HYDROLASE, GENE REGULATION exosome complex exonuclease 178: 3023-A 1z2c-B 2.1 3.1 70 346 4 0 0 8 S SIGNALING PROTEIN rho-related gtp-binding protein rhoc 179: 3023-A 1yc9-A 2.1 5.6 75 411 11 0 0 6 S MEMBRANE PROTEIN multidrug resistance protein (vcec) M 180: 3023-A 1wp7-A 2.1 2.2 50 64 8 0 0 2 S VIRUS/VIRAL PROTEIN fusion protein (nipah virus) viru 181: 3023-A 1wa9-A 2.1 3.4 66 317 11 0 0 8 S CIRCADIAN RHYTHM period circadian protein (clock-6 pro 182: 3023-A 1r9s-A 2.1 2.3 51 1381 2 0 0 3 S TRANSCRIPTION/DNA/RNA DNA-directed RNA polymerase ii l 183: 3023-A 1r8w-A 2.1 10.8 63 786 10 0 0 5 S LYASE glycerol dehydratase (clostridium butyricum) ba 184: 3023-A 1oyd-A 2.1 10.3 71 1006 6 0 0 6 S MEMBRANE PROTEIN acriflavine resistance protein b (es 185: 3023-A 1orj-A 2.1 3.1 65 126 11 0 0 6 S CHAPERONE flagellar protein flis (aquifex aeolicus vf 186: 3023-A 1k0n-A 2.1 3.9 75 226 7 0 0 8 S METAL TRANSPORT chloride intracellular channel protei 187: 3023-A 1iyg-A 2.1 4.5 61 133 7 0 0 5 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 188: 3023-A 1h54-B 2.1 3.3 79 754 5 0 0 9 S HYDROLASE maltose phosphorylase (lactobacillus brevi 189: 3023-A 1bbh-A 2.1 4.0 73 131 8 0 0 7 S ELECTRON TRANSPORT(HEME PROTEIN) Cytochrome c' (chrom 190: 3023-A 1b3u-A 2.1 3.1 70 588 9 0 0 9 S SCAFFOLD PROTEIN protein phosphatase pp2a fragment (h 191: 3023-A 2fv2-A 2.0 5.8 72 267 11 0 0 9 S TRANSCRIPTION rcd1 required for cell differentiation1 192: 3023-A 2c6j-A 2.0 3.0 65 265 6 0 0 6 S RECEPTOR duffy receptor, alpha form (erythrocyte bindi 193: 3023-A 1xji-A 2.0 4.5 75 225 7 0 0 8 S MEMBRANE PROTEIN bacteriorhodopsin (br) (halobacteriu 194: 3023-A 1t33-A 2.0 5.4 80 220 9 0 0 6 S TRANSCRIPTION putative transcriptional repressor (tetr 195: 3023-A 1s5l-Z 2.0 1.6 47 58 2 0 0 2 S PHOTOSYNTHESIS photosystem q(b) protein (32 kda thylak 196: 3023-A 1qbk-B 2.0 4.3 72 879 7 0 0 6 S NUCLEAR TRANSPORT PROTEIN COMPLEX karyopherin beta2 fr 197: 3023-A 1ffk-S 2.0 1.5 46 65 4 0 0 2 S
Dali analysis of N-terminal domain
FSSP FAMILIES OF STRUCTURALLY SIMILAR PROTEINS, VERSION 1.0 (Apr 1 1995) CREATED Sun May 13 02:56:44 BST 2007 for dali on s030-033.ebi.ac.uk METHOD Dali ver. 2.0: Holm, L., Sander, C. (1993) J.Mol.Biol. 233,123-138 DATABASE 8997 protein chains PDBID 3256-A HEADER COMPND SOURCE AUTHOR SEQLENGTH 173 NALIGN 423 WARNING pairs with Z<2.0 are structurally dissimilar ## SUMMARY: PDB/chain identifiers and structural alignment statistics NR. STRID1 STRID2 Z RMSD LALI LSEQ2 %IDE REVERS PERMUT NFRAG TOPO PROTEIN 1: 3256-A 2gnx-A 23.2 0.0 173 280 100 0 0 1 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 2: 3256-A 1e2a-A 7.5 4.5 80 102 9 0 0 6 S TRANSFERASE enzyme iia (enzyme iii, lactose-specific i 3: 3256-A 1kt0-A 7.4 2.8 81 357 6 0 0 7 S ISOMERASE 51 kda fk506-binding protein (fkbp51) Mutant 4: 3256-A 2d2s-A 7.3 3.1 75 217 11 0 0 5 S ENDOCYTOSIS/EXOCYTOSIS exocyst complex component exo84 5: 3256-A 1vcs-A 7.3 4.7 78 102 9 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION vesicle transpor 6: 3256-A 2cmr-A 6.9 3.2 104 192 11 0 0 9 S IMMUNOGLOBULIN COMPLEX d5 (fab heavy chain) d5 (fab li 7: 3256-A 2c5i-T 6.9 2.8 75 93 11 0 0 5 S PROTEIN TRANSPORT/COMPLEX t-snare affecting a late gol 8: 3256-A 2h7o-A 6.8 3.0 81 270 5 0 0 7 S SIGNALING PROTEIN protein kinase ypka fragment (protei 9: 3256-A 2h7v-C 6.6 4.2 76 269 13 0 0 5 S SIGNALING PROTEIN migration-inducing protein 5 (ras-re 10: 3256-A 2dnx-A 6.5 4.9 80 130 6 0 0 6 S TRANSPORT PROTEIN syntaxin-12 fragment (homo sapiens) 11: 3256-A 1hg5-A 6.5 3.2 85 263 9 0 0 6 S ENDOCYTOSIS clathrin assembly protein short form frag 12: 3256-A 1a17 6.4 2.5 71 159 3 0 0 5 S HYDROLASE serineTHREONINE PROTEIN PHOSPHATASE 5 fragme 13: 3256-A 2if4-A 6.3 2.5 82 258 7 0 0 7 S SIGNALING PROTEIN atfkbp42 fragment (twd1 (twisted dwa 14: 3256-A 1owa-A 6.2 3.3 76 156 12 0 0 6 S CYTOKINE spectrin alpha chain, erythrocyte fragment (e 15: 3256-A 2oew-A 6.1 2.8 119 358 8 0 0 12 S PROTEIN TRANSPORT programmed cell death 6-interacting 16: 3256-A 1xdo-A 6.1 3.5 83 686 10 0 0 8 S TRANSFERASE polyphosphate kinase (ppk, polyphosphoric 17: 3256-A 1vls 6.1 3.6 77 146 10 0 0 7 S CHEMOTAXIS aspartate receptor (tar) biological_unit ( 18: 3256-A 1br0-A 6.1 3.5 79 120 13 0 0 6 S MEMBRANE PROTEIN syntaxin 1-a fragment Mutant (rattus 19: 3256-A 2oev-A 6.0 29.3 112 697 6 0 0 10 S PROTEIN TRANSPORT programmed cell death 6-interacting 20: 3256-A 2cwy-A 6.0 2.4 82 92 20 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 21: 3256-A 1sjj-A 6.0 4.6 88 863 5 0 0 9 S CONTRACTILE PROTEIN actinin (gallus gallus) chicken 22: 3256-A 2iak-A 5.9 2.4 68 197 6 0 0 5 S CELL ADHESION bullous pemphigoid antigen 1, isoform 5 23: 3256-A 2dl1-A 5.9 4.1 86 116 3 0 0 7 S PROTEIN TRANSPORT spartin fragment (trans-activated by 24: 3256-A 2cwo-A 5.8 3.3 83 165 5 0 0 10 S RNA BINDING PROTEIN RNA silencing suppressor (p21) (b 25: 3256-A 2cbi-A 5.7 4.3 123 584 7 0 0 13 S HYDROLASE hyaluronidase fragment expression_system_ve 26: 3256-A 2gsc-A 5.6 3.7 74 113 12 0 0 5 S UNKNOWN FUNCTION conserved hypothetical protein (conse 27: 3256-A 2cpt-A 5.6 4.0 78 117 12 0 0 5 S PROTEIN TRANSPORT vacuolar sorting protein 4b fragment 28: 3256-A 1v9d-A 5.6 4.4 83 308 5 0 0 6 S PROTEIN BINDING diaphanous protein homolog 1 fragment 29: 3256-A 1zu2-A 5.5 5.2 73 158 5 0 0 6 S TRANSPORT PROTEIN mitochondrial import receptor subuni 30: 3256-A 2ijp-A 5.4 4.1 113 217 12 0 0 11 S SIGNALING PROTEIN 14-3-3 protein (cryptosporidium par 31: 3256-A 2fup-A 5.4 2.9 80 126 9 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 32: 3256-A 1y79-1 5.4 3.0 91 680 4 0 0 9 S HYDROLASE peptidyl-dipeptidase dcp (dipeptidyl carboxy 33: 3256-A 2iub-A 5.3 4.7 79 331 11 0 0 5 S MEMBRANE PROTEIN divalent cation transport-related pro 34: 3256-A 2e9x-D 5.3 2.5 66 197 3 0 0 6 S REPLICATION DNA replication complex gins protein psf1 35: 3256-A 1qqe-A 5.3 3.1 77 281 8 0 0 7 S PROTEIN TRANSPORT vesicular transport protein sec17 Mu 36: 3256-A 1u89-A 5.2 3.1 77 139 4 0 0 6 S STRUCTURAL PROTEIN talin 1 fragment (talin) (mus musc 37: 3256-A 1tkn-A 5.1 3.8 75 110 13 0 0 5 S MEMBRANE PROTEIN amyloid beta a4 protein (homo sapien 38: 3256-A 1ek8-A 5.1 5.6 78 185 9 0 0 5 S TRANSLATION ribosome recycling factor (ribosome relea 39: 3256-A 2a73-B 5.0 3.2 91 976 11 0 0 13 S IMMUNE SYSTEM complement c3 fragment complement c3 fra 40: 3256-A 1uur-A 5.0 3.1 82 460 7 0 0 6 S SIGNAL TRANSDUCTION stat protein fragment (dictyostel 41: 3256-A 1qja-A 5.0 3.0 75 217 5 0 0 8 S COMPLEX (SIGNAL TRANSDUCTION/PEPTIDE) 14-3-3 protein z 42: 3256-A 1hx1-B 5.0 3.2 76 112 13 0 0 6 S CHAPERONE/CHAPERONE INHIBITOR heat shock cognate 71 k 43: 3256-A 1fpo-A 5.0 3.4 72 171 8 0 0 4 S CHAPERONE chaperone protein hscb (hsc20) Mutant (esc 44: 3256-A 2bkp-A 4.9 2.8 76 193 7 0 0 6 S HYPOTHETICAL PROTEIN hypothetical protein ph0236 (pyr 45: 3256-A 1x8z-A 4.9 3.2 75 151 9 0 0 3 S PROTEIN BINDING invertasePECTIN METHYLESTERASE INHIBIT 46: 3256-A 2bkn-A 4.8 3.0 74 190 7 0 0 4 S MEMBRANE PROTEIN hypothetical protein ph0236 (pyrococ 47: 3256-A 2ak6-A 4.8 3.7 71 153 7 0 0 7 S 48: 3256-A 1ya0-A 4.8 4.3 81 458 6 0 0 8 S SIGNALING PROTEIN smg-7 transcript variant 2 fragment 49: 3256-A 1uw4-B 4.8 3.2 84 247 11 0 0 11 S NONSENSE MEDIATED MRNA DECAY PROTEIN regulator of nons 50: 3256-A 1qgr-A 4.8 2.7 79 871 5 0 0 7 S TRANSPORT RECEPTOR importin beta subunit (karyopherin 51: 3256-A 1fce 4.8 2.5 60 629 10 0 0 5 S CELLULASE DEGRADATION cellulase celf fragment (clostr 52: 3256-A 1i1i-P 4.7 3.2 95 665 7 0 0 9 S HYDROLASE neurolysin (rattus norvegicus) rat express 53: 3256-A 1dov-A 4.7 4.9 76 181 9 0 0 6 S CELL ADHESION alpha-catenin fragment (mus musculus) m 54: 3256-A 1z0p-A 4.6 1.6 51 73 4 0 0 2 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 55: 3256-A 1sj7-A 4.6 5.5 77 167 10 0 0 5 S STRUCTURAL PROTEIN talin 1 fragment (mus musculus) mo 56: 3256-A 1ecr-A 4.6 2.8 65 305 6 0 0 7 S COMPLEX (DNA-BINDING PROTEIN/DNA) replication terminat 57: 3256-A 2bvl-A 4.5 3.6 90 543 14 0 0 9 S TOXIN toxin b fragment Mutant (clostridium difficile) 58: 3256-A 1u6g-C 4.5 4.4 75 1146 7 0 0 9 S LIGASE cullin homolog 1 (cul-1) ring-box protein 1 (rb 59: 3256-A 1di1-A 4.5 4.4 72 290 4 0 0 5 S LYASE aristolochene synthase (sesquiterpene cyclase, 60: 3256-A 1aqt 4.5 1.7 47 135 0 0 0 2 S HYDROLASE atp synthase fragment Mutant (escherichia c 61: 3256-A 2gom-A 4.4 2.4 54 61 6 0 0 5 S CELL ADHESION/TOXIN fibrinogen-binding protein fragmen 62: 3256-A 2fez-A 4.4 3.2 88 373 11 0 0 9 S TRANSCRIPTION probable regulatory protein embr (mycob 63: 3256-A 2d9d-A 4.4 3.7 75 89 13 0 0 7 S CHAPERONE bag family molecular chaperone regulator 5 f 64: 3256-A 1z1w-A 4.4 2.9 70 780 6 0 0 8 S HYDROLASE tricorn protease interacting factor f3 (the 65: 3256-A 1qoy-A 4.4 5.6 93 303 15 0 0 7 S TOXIN hemolysin e (cytolysin a, silent hemolysin a, hl 66: 3256-A 1ocr-C 4.4 2.9 73 261 7 0 0 4 S OXIDOREDUCTASE cytochrome c oxidase (ferrocytochrome c 67: 3256-A 1h3n-A 4.4 3.6 76 813 14 0 0 6 S AMINOACYL-TRNA SYNTHETASE leucyl-trna synthetase (the 68: 3256-A 1bk5-A 4.4 3.0 71 422 7 0 0 8 S PROTEIN TRANSPORT karyopherin alpha fragment (importin 69: 3256-A 2c0s-A 4.3 2.0 51 64 6 0 0 2 S TRANSFERASE conserved domain protein fragment (bacill 70: 3256-A 2aaw-A 4.3 2.9 71 205 11 0 0 6 S TRANSFERASE glutathione s-transferase (plasmodium fal 71: 3256-A 1wp1-A 4.3 1.8 51 456 16 0 0 2 S MEMBRANE PROTEIN outer membrane protein oprm (drug-dis 72: 3256-A 1oxj-A 4.3 3.4 70 170 11 0 0 8 S RNA BINDING PROTEIN RNA-binding protein smaug fragment 73: 3256-A 1k8t-A 4.3 5.3 77 498 12 0 0 6 S TOXIN,LYASE calmodulin-sensitive adenylate cyclase ( 74: 3256-A 1h2s-B 4.3 3.7 51 60 6 0 0 1 S MENBRANE PROTEIN COMPLEX sensory rhodopsin ii fragment 75: 3256-A 1fiy 4.3 2.9 63 873 8 0 0 6 S COMPLEX (LYASE/INHIBITOR) phosphoenolpyruvate carboxyl 76: 3256-A 1a32 4.3 2.1 54 85 11 0 0 3 S RIBOSOMAL PROTEIN ribosomal protein s15 (bacillus ste 77: 3256-A 2iml-A 4.2 2.5 59 188 8 0 0 4 S FLAVOPROTEIN hypothetical protein (archaeoglobus fulg 78: 3256-A 2e9x-A 4.2 1.3 53 144 6 0 0 2 S REPLICATION DNA replication complex gins protein psf1 79: 3256-A 2avk-A 4.2 3.6 71 133 3 0 0 4 S OXYGEN STORAGE/TRANSPORT hemerythrin-like domain prote 80: 3256-A 1sz9-A 4.2 2.6 74 143 9 0 0 7 S TRANSCRIPTION pcf11 protein fragment (saccharomyces c 81: 3256-A 1fp3-A 4.2 6.0 107 402 5 0 0 14 S ISOMERASE n-acyl-d-glucosamine 2-epimerase (sus scro 82: 3256-A 2iiu-A 4.1 3.8 75 203 8 0 0 6 S STRUCTURAL GENOMICS/UNKNOWN FUNCTION hypothetical prot 83: 3256-A 2i6h-A 4.1 3.8 92 176 10 0 0 12 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 84: 3256-A 2fuq-A 4.1 2.4 61 746 15 0 0 6 S SUGAR BINDING PROTEIN heparinase ii protein (pedobact 85: 3256-A 1y64-B 4.1 3.6 81 411 9 0 0 7 S STRUCTURAL PROTEIN actin, alpha skeletal muscle (alpha 86: 3256-A 1rkc-A 4.1 5.2 76 258 11 0 0 7 S CELL ADHESION, STRUCTURAL PROTEIN vinculin fragment ta 87: 3256-A 1qqt-A 4.1 3.2 72 546 6 0 0 5 S LIGASE methionyl-trna synthetase fragment (escherichi 88: 3256-A 1nkd 4.1 2.0 51 59 2 0 0 2 S TRANSCRIPTION REGULATION rop (cole1 repressor of prime 89: 3256-A 1ee4-A 4.1 3.0 71 423 7 0 0 8 S TRANSPORT PROTEIN karyopherin alpha fragment (serine-r 90: 3256-A 1a0f-A 4.1 2.4 63 201 5 0 0 5 S TRANSFERASE glutathione s-transferase fragment (gst, g 91: 3256-A 2o8p-A 4.0 5.0 104 215 13 0 0 11 S SIGNALING PROTEIN 14-3-3 domain containing protein (c 92: 3256-A 2nw9-A 4.0 5.8 98 265 9 0 0 10 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (xanthomona 93: 3256-A 2jbw-A 4.0 4.2 69 348 9 0 0 7 S HYDROLASE 2,6-dihydroxy-pseudo-oxynicotine hydrolase ( 94: 3256-A 2ibd-A 4.0 6.5 89 190 7 0 0 12 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION possible transcr 95: 3256-A 1yw0-A 4.0 4.8 84 238 8 0 0 6 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (xanthomona 96: 3256-A 1yoz-A 4.0 4.3 66 113 8 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 97: 3256-A 1v7v-A 4.0 4.3 73 779 7 0 0 10 S TRANSFERASE chitobiose phosphorylase (vibrio proteoly 98: 3256-A 1tf4-A 4.0 4.3 97 605 6 0 0 12 S GLYCOSYL HYDROLASE t. fusca endoEXO-CELLULASE E4 CATAL 99: 3256-A 1qvr-A 4.0 1.5 49 803 12 0 0 3 S CHAPERONE clpb protein (thermus thermophilus) bacteri 100: 3256-A 1k34-A 4.0 3.1 50 60 4 0 0 4 S VIRUS/VIRAL PROTEIN transmembrane glycoprotein gp41 f 101: 3256-A 2ooe-A 3.9 3.8 73 528 10 0 0 7 S STRUCTURAL PROTEIN cleavage stimulation factor 77 kda 102: 3256-A 2hi7-B 3.9 3.3 74 134 8 0 0 6 S OXIDOREDUCTASE thiol:disulfide interchange protein dsb 103: 3256-A 1zrl-A 3.9 3.1 70 583 3 0 0 5 S CELL INVASION erythrocyte binding antigen region ii (e 104: 3256-A 1x0t-A 3.9 3.2 64 106 8 0 0 6 S HYDROLASE ribonuclease p protein component 4 (ribonucl 105: 3256-A 1eem-A 3.9 3.5 71 237 6 0 0 6 S TRANSFERASE glutathione-s-transferase (homo sapiens) 106: 3256-A 1b3q-A 3.9 3.1 62 368 8 0 0 6 S TRANSFERASE chemotaxis protein chea fragment Mutant ( 107: 3256-A 1a36-A 3.9 1.8 51 544 0 0 0 2 S COMPLEX (ISOMERASE/DNA) topoisomerase i fragment Mutan 108: 3256-A 2p0n-A 3.8 3.1 74 157 11 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 109: 3256-A 2oo2-A 3.8 1.7 46 76 4 0 0 1 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 110: 3256-A 2nwb-A 3.8 3.3 76 379 5 0 0 7 S OXIDOREDUCTASE conserved domain protein (putative 2,3- 111: 3256-A 2nty-A 3.8 2.6 93 332 4 0 0 9 S SIGNALING PROTEIN emb|cab41934.1 fragment (prone8) rac 112: 3256-A 2i0m-A 3.8 3.8 78 207 5 0 0 5 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION phosphate transp 113: 3256-A 1zke-A 3.8 1.6 51 81 4 0 0 2 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 114: 3256-A 1xzp-A 3.8 2.9 73 456 10 0 0 5 S HYDROLASE probable trna modification gtpase trme (trme 115: 3256-A 1xu5-E 3.8 78.8 68 166 6 0 0 6 S OXIDOREDUCTASE methane monooxygenase component a alpha 116: 3256-A 1xmf-E 3.8259.4 68 166 6 0 0 6 S OXIDOREDUCTASE methane monooxygenase component a alpha 117: 3256-A 1wa5-C 3.8 3.2 75 937 8 0 0 9 S NUCLEAR TRANSPORT/COMPLEX gtp-binding nuclear protein 118: 3256-A 1vmg-A 3.8 1.8 49 80 4 0 0 1 S HYDROLASE hypothetical protein sso3215 (sulfolobus so 119: 3256-A 1q0d-A 3.8 3.6 70 117 11 0 0 6 S OXIDOREDUCTASE superoxide dismutase [ni] (nickel-conta 120: 3256-A 1nfn 3.8 5.7 78 132 8 0 0 7 S LIPID TRANSPORT apolipoprotein e3 fragment (homo sapi 121: 3256-A 1kqf-C 3.8 4.3 86 216 7 0 0 7 S OXIDOREDUCTASE formate dehydrogenase, nitrate-inducibl 122: 3256-A 1a87 3.8 7.6 59 297 10 0 0 4 S BACTERIOCIN colicin n fragment (escherichia coli) I. 123: 3256-A 2ot3-A 3.7 4.7 64 253 8 0 0 4 S PROTEIN TRANSPORT rab5 gdpGTP EXCHANGE FACTOR fragment 124: 3256-A 2fm8-C 3.7 5.4 65 220 6 0 0 4 S CHAPERONE/CELL INVASION surface presentation of antige 125: 3256-A 2caz-A 3.7 1.6 48 58 2 0 0 2 S PROTEIN TRANSPORT suppressor protein stp22 of temperat 126: 3256-A 1zee-A 3.7 3.2 75 356 9 0 0 7 S UNKNOWN FUNCTION hypothetical protein so4414 (shewane 127: 3256-A 1z2c-B 3.7 3.1 70 346 4 0 0 8 S SIGNALING PROTEIN rho-related gtp-binding protein rhoc 128: 3256-A 1wvt-A 3.7 3.7 77 147 12 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 129: 3256-A 1t9y-A 3.7 2.7 50 1016 4 0 0 3 S MEMBRANE PROTEIN acriflavine resistance protein b Muta 130: 3256-A 1t98-A 3.7 3.0 76 261 13 0 0 10 S CELL CYCLE chromosome partition protein mukf fragment 131: 3256-A 1qaz-A 3.7 3.4 80 351 10 0 0 9 S LYASE alginate lyase a1-iii biological_unit (sphingom 132: 3256-A 1k8k-G 3.7 2.8 65 138 6 0 0 8 S STRUCTURAL PROTEIN actin-like protein 3 (arp3) actin- 133: 3256-A 1fft-C 3.7 4.2 80 185 6 0 0 6 S OXIDOREDUCTASE ubiquinol oxidase ubiquinol oxidase ub 134: 3256-A 1c17-M 3.7 7.4 79 142 6 0 0 6 S MEMBRANE PROTEIN atp synthase subunit c atp synthase s 135: 3256-A 2oer-A 3.6 5.1 82 178 7 0 0 8 S TRANSCRIPTION probable transcriptional regulator (pse 136: 3256-A 1yc9-A 3.6 5.6 75 411 11 0 0 6 S MEMBRANE PROTEIN multidrug resistance protein (vcec) M 137: 3256-A 1wp7-A 3.6 2.2 50 64 8 0 0 2 S VIRUS/VIRAL PROTEIN fusion protein (nipah virus) viru 138: 3256-A 1r8w-A 3.6 10.8 63 786 10 0 0 5 S LYASE glycerol dehydratase (clostridium butyricum) ba 139: 3256-A 1pn1-A 3.6 5.1 74 176 15 0 0 8 S 140: 3256-A 1orj-A 3.6 3.1 65 126 11 0 0 6 S CHAPERONE flagellar protein flis (aquifex aeolicus vf 141: 3256-A 1iyg-A 3.6 4.5 61 133 7 0 0 5 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 142: 3256-A 1h54-B 3.6 3.3 79 754 5 0 0 9 S HYDROLASE maltose phosphorylase (lactobacillus brevi 143: 3256-A 1b3u-A 3.6 3.1 70 588 9 0 0 9 S SCAFFOLD PROTEIN protein phosphatase pp2a fragment (h 144: 3256-A 2p61-A 3.5 4.2 76 114 8 0 0 4 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 145: 3256-A 2ewf-A 3.5 9.0 70 587 9 0 0 6 S HYDROLASE nicking endonuclease n.Bspd6i (bacillus sp. 146: 3256-A 2c6j-A 3.5 3.0 65 265 6 0 0 6 S RECEPTOR duffy receptor, alpha form (erythrocyte bindi 147: 3256-A 1t33-A 3.5 5.4 80 220 9 0 0 6 S TRANSCRIPTION putative transcriptional repressor (tetr 148: 3256-A 1s5l-Z 3.5 1.6 47 58 2 0 0 2 S PHOTOSYNTHESIS photosystem q(b) protein (32 kda thylak 149: 3256-A 1r9s-A 3.5 2.3 51 1381 2 0 0 3 S TRANSCRIPTION/DNA/RNA DNA-directed RNA polymerase ii l 150: 3256-A 1qbk-B 3.5 4.3 72 879 7 0 0 6 S NUCLEAR TRANSPORT PROTEIN COMPLEX karyopherin beta2 fr 151: 3256-A 1oyd-A 3.5 10.3 71 1006 6 0 0 6 S MEMBRANE PROTEIN acriflavine resistance protein b (es 152: 3256-A 1ffk-S 3.5 1.5 46 65 4 0 0 2 S 153: 3256-A 1cxz-B 3.5 1.8 50 86 8 0 0 2 S SIGNALING PROTEIN his-tagged transforming protein rhoa 154: 3256-A 2o7t-A 3.4 4.2 86 183 13 0 0 9 S TRANSCRIPTION REGULATOR transcriptional regulator (bac 155: 3256-A 2nw8-A 3.4 6.2 91 266 11 0 0 7 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (xanthomona 156: 3256-A 2nvy-A 3.4 3.9 71 1419 1 0 0 7 S TRANSCRIPTION DNA-directed RNA polymerase ii largest s 157: 3256-A 1xeq-A 3.4 2.6 56 89 0 0 0 3 S VIRUS/VIRAL PROTEIN nonstructural protein ns1 (influe 158: 3256-A 1s5l-B 3.4 2.4 50 476 6 0 0 2 S PHOTOSYNTHESIS photosystem q(b) protein (32 kda thylak 159: 3256-A 1n4k-A 3.4 3.5 71 292 7 0 0 6 S MEMBRANE PROTEIN inositol 1,4,5-trisphosphate receptor 160: 3256-A 1bbh-A 3.4 4.0 71 131 8 0 0 6 S ELECTRON TRANSPORT(HEME PROTEIN) Cytochrome c' (chrom 161: 3256-A 5eat 3.3 4.5 65 532 9 0 0 8 S ISOPRENOID SYNTHASE 5-epi-aristolochene synthase (5-ep 162: 3256-A 2o0i-1 3.3 9.5 69 180 10 0 0 6 S SURFACE ACTIVE PROTEIN c protein alpha-antigen fragmen 163: 3256-A 2nox-A 3.3 7.7 97 261 7 0 0 6 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (ralstonia 164: 3256-A 2j68-A 3.3 2.3 48 680 15 0 0 5 S HYDROLASE bacterial dynamin-like protein (nostoc punc 165: 3256-A 2ig1 3.3 3.9 73 507 8 0 0 4 S 166: 3256-A 2ib0-A 3.3 3.9 74 142 5 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION conserved hypoth 167: 3256-A 2i9c-A 3.3 3.3 59 117 7 0 0 5 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 168: 3256-A 2d4x-A 3.3 4.2 80 214 10 0 0 8 S STRUCTURAL PROTEIN flagellar hook-associated protein 3 169: 3256-A 2cic-A 3.3 3.3 66 223 9 0 0 7 S HYDROLASE deoxyuridine 5'-triphosphate nucleotide hydr 170: 3256-A 256b-A 3.3 3.5 66 106 5 0 0 5 S ELECTRON TRANSPORT Cytochrome b562 (oxidized) (escher 171: 3256-A 1xji-A 3.3 4.4 73 225 7 0 0 7 S MEMBRANE PROTEIN bacteriorhodopsin (br) (halobacteriu 172: 3256-A 1x9b-A 3.3 2.5 49 53 6 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical mem 173: 3256-A 1wpa-A 3.3 1.3 51 107 10 0 0 2 S CELL ADHESION occludin fragment (homo sapiens) human 174: 3256-A 1vjx-A 3.3 2.6 64 145 8 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION putative ferriti 175: 3256-A 1oyz-A 3.3 2.8 67 270 4 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 176: 3256-A 1o86-A 3.3 3.6 63 574 8 0 0 4 S METALLOPROTEASE angiotensin converting enzyme (ace-t,D 177: 3256-A 1mqp-A 3.3 4.2 75 669 3 0 0 6 S HYDROLASE alpha-d-glucuronidase (geobacillus stearoth 178: 3256-A 1k04-A 3.3 2.1 51 142 10 0 0 2 S TRANSFERASE focal adhesion kinase 1 (fadk 1) (homo s 179: 3256-A 1grj 3.3 1.5 47 151 4 0 0 3 S TRANSCRIPTION REGULATION Grea transcript cleavage fact 180: 3256-A 1gm5-A 3.3 2.2 47 729 4 0 0 3 S HELICASE recg DNA (5'-(CpApGpCpTpCpCpApTpGpApTp* cpAp 181: 3256-A 2uxw-A 3.2 3.4 55 567 5 0 0 4 S OXIDOREDUCTASE very-long-chain specific acyl-coa dehyd 182: 3256-A 2oje-D 3.2 8.7 80 214 5 0 0 7 S IMMUNE SYSTEM hla class ii histocompatibility antigen, 183: 3256-A 2icw-G 3.2 8.7 82 213 7 0 0 5 S IMMUNE SYSTEM hla class ii histocompatibility antigen, 184: 3256-A 2hh7-A 3.2 2.1 51 85 8 0 0 2 S UNKNOWN FUNCTION hypothetical protein csor (mycobacte 185: 3256-A 2gyq-A 3.2 5.4 76 162 1 0 0 4 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION ycfi, putative s 186: 3256-A 2go5-5 3.2 2.6 49 64 10 0 0 5 S TRANSLATION/RNA signal recognition particle 19 kda pro 187: 3256-A 2fv2-A 3.2 3.2 64 267 11 0 0 7 S TRANSCRIPTION rcd1 required for cell differentiation1 188: 3256-A 2f42-A 3.2 2.7 49 138 8 0 0 3 S CHAPERONE stip1 homology and u-box containing protein 189: 3256-A 2f1m-A 3.2 2.1 51 225 2 0 0 2 S TRANSPORT PROTEIN acriflavine resistance protein a fra 190: 3256-A 2clb-A 3.2 3.3 77 165 8 0 0 7 S METAL BINDING PROTEIN dps-like protein (sulfolobus so 191: 3256-A 1ywm-A 3.2 8.7 62 180 11 0 0 4 S SURFACE ACTIVE PROTEIN c protein alpha-antigen fragmen 192: 3256-A 1t9w-A 3.2 8.0 66 1016 6 0 0 7 S MEMBRANE PROTEIN acriflavine resistance protein b Muta 193: 3256-A 1oy8-A 3.2 8.4 68 1006 7 0 0 6 S MEMBRANE PROTEIN acriflavine resistance protein b (es 194: 3256-A 1nzp-A 3.2 7.5 46 86 9 0 0 4 S DNA BINDING PROTEIN/TRANSFERASE DNA polymerase lambda 195: 3256-A 1mqs-A 3.2 4.5 68 578 6 0 0 7 S ENDOCYTOSIS/EXOCYTOSIS sly1 protein (sly1p) integral m 196: 3256-A 1k0n-A 3.2 3.8 73 226 12 0 0 9 S METAL TRANSPORT chloride intracellular channel protei 197: 3256-A 1jb0-A 3.2 4.3 69 740 6 0 0 6 S PHOTOSYNTHESIS photosystem i p700 chlorophyll a apopr 198: 3256-A 1ho8-A 3.2 3.5 77 447 13 0 0 9 S HYDROLASE vacuolar atp synthase subunit h (vma13, v-a 199: 3256-A 1g6u-A 3.2 1.7 43 47 9 0 0 2 S DE NOVO PROTEIN domain swapped dimer N.L.Ogihara G. 200: 3256-A 1e96-B 3.2 3.9 74 184 11 0 0 7 S SIGNALLING COMPLEX ras-related c3 botulinum toxin sub 201: 3256-A 1ail 3.2 2.5 51 70 6 0 0 3 S RNA-BINDING PROTEIN nonstructural protein ns1 fragment 202: 3256-A 2nw7-A 3.1 5.6 87 259 11 0 0 7 S OXIDOREDUCTASE tryptophan 2,3-dioxygenase (xanthomona 203: 3256-A 2ii2-A 3.1 2.9 62 304 3 0 0 8 S METAL BINDING PROTEIN alpha-11 giardin (giardia lambl 204: 3256-A 2i2x-B 3.1 4.1 68 258 13 0 0 8 S TRANSFERASE methyltransferase 1 (mtab) methyltransfera 205: 3256-A 2ccy-A 3.1 4.7 71 127 11 0 0 6 S ELECTRON TRANSPORT (HEME PROTEIN) Cytochrome c' (rhod 206: 3256-A 2avr-X 3.1 1.8 51 109 12 0 0 2 S CELL ADHESION adhesion a (fusobacterium nucleatum) ba 207: 3256-A 2a7o-A 3.1 9.0 72 100 7 0 0 6 S TRANSCRIPTION huntingtin interacting protein b fragmen 208: 3256-A 1o5h-A 3.1 4.3 73 189 4 0 0 7 S LYASE formiminotetrahydrofolate cyclodeaminase (therm 209: 3256-A 1fi4-A 3.1 3.2 69 391 7 0 0 5 S LYASE mevalonate 5-diphosphate decarboxylase (mdd, di 210: 3256-A 1dgs-A 3.1 2.5 52 581 8 0 0 7 S LIGASE DNA ligase (thermus filiformis) bacteria J.Y. 211: 3256-A 1b04-A 3.1 2.9 53 310 6 0 0 5 S LIGASE DNA ligase fragment Mutant (bacillus stearothe 212: 3256-A 1aep 3.1 4.5 72 153 7 0 0 6 S LIPOPROTEIN Apolipophorin iii African locust (locusta 213: 3256-A 2pih-A 3.0 1.0 42 121 5 0 0 1 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION protein ymca (b 214: 3256-A 2pbe-A 3.0 3.2 66 251 0 0 0 5 S TRANSFERASE aminoglycoside 6-adenylyltransferase fragm 215: 3256-A 2oc5-A 3.0 3.5 85 216 6 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 216: 3256-A 2jf4-A 3.0 3.8 67 486 7 0 0 8 S HYDROLASE periplasmic trehalase (trehalase, alpha-alph 217: 3256-A 2gf8-B 3.0 19.0 71 1089 7 0 0 8 S 218: 3256-A 2ftu-A 3.0 3.2 65 118 2 0 0 4 S LIPID BINDING PROTEIN alpha-2-macroglobulin receptor-a 219: 3256-A 2cwl-A 3.0 2.5 71 299 6 0 0 6 S OXIDOREDUCTASE manganese-free pseudocatalase (thermus 220: 3256-A 2cje-A 3.0 3.1 69 258 4 0 0 4 S HYDROLASE dutpase (deoxyuridine triphosphatase, dutp d 221: 3256-A 2c5z-A 3.0 8.7 68 93 3 0 0 4 S TRANSCRIPTION set domain protein 2 fragment expressio 222: 3256-A 2aja-A 3.0 3.2 68 335 6 0 0 10 S PROTEIN BINDING ankyrin repeat family protein (legion 223: 3256-A 2a7w-A 3.0 1.4 46 88 4 0 0 3 S HYDROLASE phosphoribosyl-atp pyrophosphatase (pra-ph) 224: 3256-A 1zym-A 3.0 8.0 66 247 3 0 0 4 S PHOSPHOTRANSFERASE enzyme i fragment (escherichia col 225: 3256-A 1y5d-A 3.0 3.5 53 170 8 0 0 7 S 226: 3256-A 1vry-A 3.0 2.1 46 61 0 0 0 3 S MEMBRANE PROTEIN glycine receptor alpha-1 chain fragme 227: 3256-A 1upk-A 3.0 3.9 69 310 7 0 0 11 S TRANSFERASE mo25 protein (mo25 alpha, cgi 66) ste-20 r 228: 3256-A 1qbz-C 3.0 4.7 56 120 4 0 0 4 S ENVELOPE GLYCOPROTEIN siv gp41 ectodomain fragment Mut 229: 3256-A 1or7-A 3.0 10.3 73 181 5 0 0 6 S TRANSCRIPTION RNA polymerase sigma-e factor (sigma-24) 230: 3256-A 1mxm-A 3.0 6.5 63 254 13 0 0 4 S 231: 3256-A 1i1r-B 3.0 2.4 63 167 5 0 0 7 S CYTOKINE interleukin-6 receptor beta chain fragment ( 232: 3256-A 1fou-A 3.0 7.9 68 257 7 0 0 4 S VIRUS/VIRAL PROTEIN upper collar protein (gp 10, conn 233: 3256-A 1e1q-G 3.0 1.7 51 122 0 0 0 2 S ATP PHOSPHORYLASE bovine mitochondrial f1-atpase (atp 234: 3256-A 1dmt-A 3.0 9.6 59 696 5 0 0 4 S HYDROLASE neutral endopeptidase fragment (neprilysin, 235: 3256-A 1alu 3.0 2.3 62 157 10 0 0 7 S CYTOKINE interleukin-6 (homo sapiens) human W.S.Some 236: 3256-A 6prc-L 2.9 3.4 51 273 8 0 0 4 S PHOTOSYNTHETIC REACTION CENTER photosynthetic reaction 237: 3256-A 2nr5-A 2.9 3.5 47 56 4 0 0 4 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 238: 3256-A 2ihg 2.9 4.9 74 333 7 0 0 8 S 239: 3256-A 2hfi-A 2.9 3.8 68 123 9 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 240: 3256-A 2g0u-A 2.9 4.8 63 92 5 0 0 4 S UNKNOWN FUNCTION type iii secretion system needle prot 241: 3256-A 2f3m-A 2.9 3.5 70 218 7 0 0 5 S TRANSFERASE glutathione s-transferase mu 1 (gstm1-1, g 242: 3256-A 2e2j-A 2.9 9.4 78 1395 6 0 0 6 S TRANSCRIPTION/DNA/RNA DNA-directed RNA polymerase ii l 243: 3256-A 1z23-A 2.9 10.0 77 163 10 0 0 5 S CELL ADHESION crk-associated substrate fragment (p130c 244: 3256-A 1t9x-A 2.9 2.7 50 1014 4 0 0 2 S MEMBRANE PROTEIN acriflavine resistance protein b Muta 245: 3256-A 1rm1-C 2.9 4.6 51 116 12 0 0 3 S TRANSCRIPTION/DNA tata-box binding protein (tata-box f 246: 3256-A 1r9t-A 2.9 4.9 61 1395 8 0 0 5 S TRANSCRIPTION/DNA/RNA DNA-directed RNA polymerase ii l 247: 3256-A 1q6a-A 2.9 3.4 56 107 7 0 0 5 S CIRCADIAN CLOCK PROTEIN circadian clock protein kaia h 248: 3256-A 1is2-A 2.9 3.1 61 637 13 0 0 5 S OXIDOREDUCTASE acyl-coa oxidase (rattus norvegicus) r 249: 3256-A 1gqi-A 2.9 4.9 88 708 7 0 0 9 S GLUCURONIDASE alpha-glucuronidase (pseudomonas cellul 250: 3256-A 1gqe-A 2.9 1.9 51 362 6 0 0 1 S PROTEIN SYNTHESIS release factor 2 (rf2) Mutant (esch 251: 3256-A 1f6f-A 2.9 2.7 69 183 3 0 0 6 S HORMONE/GROWTH FACTOR/HORMONE RECEPTOR placental lact 252: 3256-A 1clq-A 2.9 3.7 57 903 4 0 0 3 S TRANSFERASE/DNA DNA polymerase fragment (gp43) DNA (5' 253: 3256-A 1a91 2.9 2.3 50 79 12 0 0 2 S MEMBRANE PROTEIN f1fo atpase subunit c (proteolipid, d 254: 3256-A 4crx-A 2.8 4.5 65 322 0 0 0 7 S PROTEIN/DNA cre recombinase Mutant biological_unit DNA 255: 3256-A 2p32-A 2.8 8.4 65 82 11 0 0 6 S CHAPERONE heat shock 70 kda protein a fragment (caeno 256: 3256-A 2oy9-A 2.8 4.2 62 83 15 0 0 5 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION upf0223 protein 257: 3256-A 2nvt-A 2.8 2.6 66 1411 2 0 0 6 S TRANSCRIPTION/DNA/RNA DNA-directed RNA polymerase ii l 258: 3256-A 2jgd-A 2.8 2.3 47 811 9 0 0 4 S OXIDOREDUCTASE 2-oxoglutarate dehydrogenase e1 compone 259: 3256-A 2jbr-A 2.8 7.3 72 399 7 0 0 7 S OXIDOREDUCTASE p-hydroxyphenylacetate hydroxylase c2 o 260: 3256-A 2hku-A 2.8 4.2 83 188 7 0 0 10 S TRANSCRIPTION REGULATOR a putative transcriptional reg 261: 3256-A 2gv9-A 2.8 1.9 47 981 0 0 0 2 S TRANSFERASE DNA polymerase (human herpesvirus 1) viru 262: 3256-A 2d1l-A 2.8 2.6 51 240 2 0 0 2 S PROTEIN BINDING metastasis suppressor protein 1 fragme 263: 3256-A 2caz-F 2.8 2.0 47 53 11 0 0 3 S PROTEIN TRANSPORT suppressor protein stp22 of temperat 264: 3256-A 2c2j-A 2.8 2.9 62 165 10 0 0 5 S DNA-BINDING PROTEIN DNA-binding stress response protei 265: 3256-A 2ao2-A 2.8 9.8 82 165 9 0 0 8 S ISOMERASE chorismate mutase fragment (hypothetical pro 266: 3256-A 2ahy-A 2.8 4.0 61 104 7 0 0 4 S TRANSPORT PROTEIN potassium channel protein (bacillus 267: 3256-A 1yux-A 2.8 4.7 68 200 4 0 0 7 S OXIDOREDUCTASE nigerythrin Mutant (desulfovibrio vulg 268: 3256-A 1y74-A 2.8 2.8 44 57 7 0 0 3 S TRANSPORT PROTEIN lin 7 homolog b fragment (mlin-7VELI 269: 3256-A 1xl4-A 2.8 4.7 58 289 5 0 0 4 S METAL TRANSPORT inward rectifier potassium channel (in 270: 3256-A 1ui5-A 2.8 4.2 72 195 8 0 0 9 S ANTIBIOTIC a-factor receptor homolog (cprb, bacterial 271: 3256-A 1sr2-A 2.8 3.7 60 116 10 0 0 3 S TRANSFERASE putative sensor-like histidine kinase yojn 272: 3256-A 1s5l-A 2.8 2.7 49 333 2 0 0 3 S PHOTOSYNTHESIS photosystem q(b) protein (32 kda thylak 273: 3256-A 1r9r-A 2.8 5.6 65 1395 8 0 0 5 S 274: 3256-A 1p32-A 2.8 2.0 48 182 4 0 0 3 S MITOCHONDRIAL MATRIX PROTEIN mitochondrial matrix prot 275: 3256-A 1nsg-B 2.8 3.7 63 94 3 0 0 7 S COMPLEX (ISOMERASE/KINASE) fk506-binding protein (fkbp 276: 3256-A 1nek-C 2.8 5.8 59 129 3 0 0 4 S OXIDOREDUCTASE/ELECTRON TRANSPORT succinate dehydrogen 277: 3256-A 1jms-A 2.8 9.3 58 360 5 0 0 6 S TRANSFERASE terminal deoxynucleotidyltransferase (ter 278: 3256-A 1huw 2.8 3.8 71 166 7 0 0 6 S HORMONE Human growth hormone mutant with phe 10 replac 279: 3256-A 1h3l-A 2.8 9.0 64 75 11 0 0 5 S RNA POLYMERASE RNA polymerase sigma factor (sigr, sco5 280: 3256-A 1gkx-A 2.8 3.4 72 308 3 0 0 7 S TRANSFERASE [3-methyl-2-oxobutanoate dehydrogenase [l 281: 3256-A 1dps-A 2.8 2.5 60 159 10 0 0 6 S DNA-BINDING PROTEIN dps (pexb) Mutant biological_unit 282: 3256-A 2o4t-A 2.7 8.6 68 90 3 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION bh3976 protein f 283: 3256-A 2jak-A 2.7 2.7 50 327 10 0 0 6 S NUCLEAR PROTEIN serineTHREONINE-PROTEIN PHOSPHATASE 2A 284: 3256-A 2ic6-A 2.7 2.4 48 71 10 0 0 4 S VIRAL PROTEIN nucleocapsid protein fragment (sin nomb 285: 3256-A 2i39-A 2.7 3.5 62 117 3 0 0 6 S VIRUS/VIRAL PROTEIN protein n1 (n1l protein) (vaccini 286: 3256-A 2fef-A 2.7 3.4 79 279 9 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 287: 3256-A 2cj8-A 2.7 6.6 58 147 2 0 0 5 S INHIBITOR invertase inhibitor (nicotiana tabacum) com 288: 3256-A 2c5j-A 2.7 4.3 52 82 2 0 0 3 S PROTEIN TRANSPORT t-snare affecting a late golgi compa 289: 3256-A 2c0e-A 2.7 5.0 57 228 4 0 0 4 S CHAPERONE windbeutel protein (wind mutant, erp29 homol 290: 3256-A 1yvp-A 2.7 2.9 60 529 7 0 0 7 S RNA BINDING PROTEIN/RNA 60-kda ss-aRO RIBONUCLEOPROTEI 291: 3256-A 1upg-A 2.7 2.5 53 88 8 0 0 5 S TRANSCRIPTION REPRESSOR transcriptional repressor tram 292: 3256-A 1u66-A 2.7 3.0 64 220 6 0 0 9 S 293: 3256-A 1tfe 2.7 5.5 44 142 14 0 0 2 S ELONGATION FACTOR elongation factor ts fragment (ther 294: 3256-A 1t9v-A 2.7 8.0 65 1014 6 0 0 8 S MEMBRANE PROTEIN acriflavine resistance protein b Muta 295: 3256-A 1oye-A 2.7 8.4 68 1006 7 0 0 6 S MEMBRANE PROTEIN acriflavine resistance protein b (es 296: 3256-A 1joy-A 2.7 3.6 51 67 6 0 0 3 S TRANSFERASE envz_ecoli fragment (escherichia coli) C 297: 3256-A 1htm-B 2.7 2.8 49 114 6 0 0 5 S INFLUENZA VIRUS HEMAGGLUTININ Hemagglutinin ectodomain 298: 3256-A 1ezf-A 2.7 3.9 76 323 9 0 0 6 S TRANSFERASE farnesyl-diphosphate farnesyltransferase 299: 3256-A 6prc-M 2.6 4.3 62 323 5 0 0 3 S PHOTOSYNTHETIC REACTION CENTER photosynthetic reaction 300: 3256-A 2ond-A 2.6 4.7 67 299 10 0 0 7 S STRUCTURAL PROTEIN cleavage stimulation factor 77 kda 301: 3256-A 2jbx-A 2.6 3.6 67 126 10 0 0 7 S APOPTOSIS m11l protein (m11l, apoptosis regulator m11l 302: 3256-A 2iu5-A 2.6 10.7 98 179 10 0 0 9 S ACTIVATOR hypothetical protein yceg (dhas) Mutant (la 303: 3256-A 2ije-S 2.6 3.8 69 237 12 0 0 7 S SIGNALING PROTEIN guanine nucleotide-releasing protein 304: 3256-A 2hs5-A 2.6 4.7 60 205 10 0 0 6 S TRANSCRIPTION REGULATOR putative transcriptional regul 305: 3256-A 2hqt-A 2.6 3.5 71 115 4 0 0 5 S BIOSYNTHETIC PROTEIN, RNA BINDING gu4 nucleic-binding 306: 3256-A 2h9c-A 2.6 4.7 42 88 10 0 0 2 S LYASE salicylate biosynthesis protein pchb fragment (i 307: 3256-A 2gb7-A 2.6 5.5 62 293 5 0 0 6 S HYDROLASE/DNA r.Ecl18ki (restriction endonuclease) DNA 308: 3256-A 2fqz-A 2.6 5.6 61 290 5 0 0 6 S HYDROLASE/DNA r.Ecl18ki (restriction endonuclease) DNA 309: 3256-A 2dme-A 2.6 9.8 80 120 6 0 0 7 S METAL BINDING PROTEIN phd finger protein 3 fragment ( 310: 3256-A 2diw-A 2.6 5.5 82 152 11 0 0 9 S RNA BINDING PROTEIN putative RNA-binding protein 16 fr 311: 3256-A 2cmq-A 2.6 5.4 83 252 6 0 0 7 S 312: 3256-A 2cca-A 2.6 3.0 57 715 12 0 0 6 S OXIDOREDUCTASE peroxidaseCATALASE T (katg, catalase-pe 313: 3256-A 2caz-B 2.6 2.7 59 100 7 0 0 6 S PROTEIN TRANSPORT suppressor protein stp22 of temperat 314: 3256-A 1zzp-A 2.6 4.3 65 109 6 0 0 6 S TRANSFERASE proto-oncogene tyrosine-protein kinase abl 315: 3256-A 1vsg-A 2.6 6.6 69 362 1 0 0 7 S GLYCOPROTEIN Variant surface glycoprotein (n-terminal 316: 3256-A 1vg2-A 2.6 3.8 63 280 6 0 0 6 S TRANSFERASE octoprenyl-diphosphate synthase (trans-oct 317: 3256-A 1s12-A 2.6 3.6 54 94 4 0 0 5 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 318: 3256-A 1orq-C 2.6 2.1 51 223 16 0 0 2 S MEMBRANE PROTEIN 6e1 fab light chain 6e1 fab heavy cha 319: 3256-A 1nlx-A 2.6 4.9 62 104 3 0 0 4 S ALLERGEN pollen allergen phl p 6 (phl p vi) (phleum p 320: 3256-A 1ng6-A 2.6 2.4 51 148 6 0 0 2 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 321: 3256-A 1mqv-A 2.6 3.2 57 123 14 0 0 7 S ELECTRON TRANSPORT cytochrome c' Mutant (rhodopseudom 322: 3256-A 1m6n-A 2.6 6.4 50 802 4 0 0 4 S PROTEIN TRANSPORT preprotein translocase seca (seca) 323: 3256-A 1m5i-A 2.6 2.2 51 105 8 0 0 2 S ANTITUMOR PROTEIN apc protein fragment (adenomatous po 324: 3256-A 1lnq-A 2.6 2.2 52 301 6 0 0 4 S METAL TRANSPORT potassium channel related protein (mth 325: 3256-A 1gxm-A 2.6 3.0 66 324 5 0 0 7 S LYASE pectate lyase (polygalacturonic acid lyase) frag 326: 3256-A 1a26 2.6 4.0 71 351 3 0 0 6 S TRANSFERASE poly (adp-ribose) polymerase fragment (par 327: 3256-A 2ors-A 2.5 8.6 46 290 9 0 0 6 S OXIDOREDUCTASE nitric oxide synthase, inducible fragme 328: 3256-A 2nyy-A 2.5 5.9 74 1267 4 0 0 6 S TOXIN/IMMUNE SYSTEM botulinum neurotoxin type a ec: cr 329: 3256-A 2jc9-A 2.5 4.6 49 467 8 0 0 4 S HYDROLASE cytosolic purine 5'-nucleotidase (5'-nucleot 330: 3256-A 2iai-A 2.5 3.5 69 194 3 0 0 9 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION putative transcr 331: 3256-A 2i2o-A 2.5 4.1 65 206 8 0 0 10 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION eif4g-like prote 332: 3256-A 2gd5-A 2.5 16.9 61 131 2 0 0 3 S PROTEIN TRANSPORT charged multivesicular body protein 333: 3256-A 2ebo-A 2.5 4.3 50 74 2 0 0 4 S ENVELOPE GLYCOPROTEIN ebola virus envelope glycoprotei 334: 3256-A 2e9x-B 2.5 3.2 66 175 9 0 0 8 S REPLICATION DNA replication complex gins protein psf1 335: 3256-A 2dgj-A 2.5 2.3 47 244 9 0 0 2 S CELL ADHESION hypothetical protein ebha fragment (sta 336: 3256-A 2caz-C 2.5 1.5 43 64 9 0 0 2 S PROTEIN TRANSPORT suppressor protein stp22 of temperat 337: 3256-A 1yy7-A 2.5 2.5 61 206 13 0 0 6 S TRANSCRIPTION stringent starvation protein a (sspa) ( 338: 3256-A 1xqr-A 2.5 3.0 61 259 3 0 0 7 S CHAPERONE hspbp1 protein fragment Mutant (homo sapien 339: 3256-A 1t56-A 2.5 4.8 71 193 13 0 0 8 S TRANSCRIPTION ethr repressor (mycobacterium tuberculo 340: 3256-A 1nh1-A 2.5 2.9 61 290 8 0 0 6 S AVIRULENCE PROTEIN avirulence b protein (pseudomonas 341: 3256-A 1mhs-A 2.5 8.4 63 920 3 0 0 6 S MEMBRANE PROTEIN, PROTON TRANSPORT plasma membrane atp 342: 3256-A 1kf6-C 2.5 4.6 62 130 6 0 0 5 S OXIDOREDUCTASE fumarate reductase flavoprotein fumarat 343: 3256-A 1jag-A 2.5 2.9 64 229 11 0 0 7 S 344: 3256-A 1fgj-A 2.5 8.2 69 499 6 0 0 6 S OXIDOREDUCTASE hydroxylamine oxidoreductase (nitrosom 345: 3256-A 1a8h 2.5 3.6 72 500 13 0 0 6 S AMINOACYL-TRNA SYNTHETASE methionyl-trna synthetase (m 346: 3256-A 3gcb 2.4 5.3 59 458 5 0 0 3 S HYDROLASE gal6 (ybh, yeast bleomycin hydrolase) Mutant 347: 3256-A 2ooc-A 2.4 2.1 50 103 4 0 0 3 S TRANSFERASE histidine phosphotransferase (caulobacter 348: 3256-A 2nn4-A 2.4 3.5 46 62 9 0 0 3 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 349: 3256-A 2jaq-A 2.4 3.7 55 189 4 0 0 5 S TRANSFERASE deoxyguanosine kinase (deoxyadenosine kina 350: 3256-A 2idg-A 2.4 4.2 78 155 4 0 0 9 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 351: 3256-A 2ia1-A 2.4 4.2 60 169 0 0 0 4 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION bh3703 protein 352: 3256-A 2g3k-A 2.4 3.9 62 93 6 0 0 6 S TRANSPORT PROTEIN vacuolar protein sorting-associated 353: 3256-A 2fzf-A 2.4 8.2 64 158 8 0 0 4 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 354: 3256-A 2fu2-A 2.4 3.0 49 77 8 0 0 3 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 355: 3256-A 2f9i-A 2.4 3.4 45 309 2 0 0 4 S TRANSFERASE acetyl-coenzyme a carboxylase carboxyl tra 356: 3256-A 2ckt-X 2.4 3.3 62 399 6 0 0 8 S 357: 3256-A 2bsk-A 2.4 5.9 48 73 8 0 0 2 S PROTEIN TRANSPORT mitochondrial import inner membrane 358: 3256-A 1whu-A 2.4 7.6 64 104 8 0 0 5 S TRANSFERASE polynucleotide phosphorylase 3'-5' RNA exo 359: 3256-A 1vdu-A 2.4 2.9 56 161 14 0 0 6 S 360: 3256-A 1v7m-V 2.4 2.7 58 145 9 0 0 5 S IMMUNE SYSTEM/CYTOKINE monoclonal tn1 fab light chain 361: 3256-A 1uby 2.4 5.2 65 348 8 0 0 5 S TRANSFERASE farnesyl diphosphate synthase (fps) Mutant 362: 3256-A 1u4k-D 2.4 6.7 68 326 12 0 0 5 S 363: 3256-A 1tdp-A 2.4 4.0 72 111 13 0 0 8 S ANTIMICROBIAL PROTEIN carnobacteriocin b2 immunity pro 364: 3256-A 1t9t-A 2.4 7.4 65 1014 8 0 0 6 S MEMBRANE PROTEIN acriflavine resistance protein b Muta 365: 3256-A 1ool-A 2.4 2.9 62 134 11 0 0 8 S 366: 3256-A 1kwh-A 2.4 2.4 48 492 8 0 0 3 S PROTEIN BINDING macromolecule-binding periplasmic pro 367: 3256-A 1k30-A 2.4 8.0 62 363 13 0 0 5 S TRANSFERASE glycerol-3-phosphate acyltransferase (gly 368: 3256-A 1jfl-A 2.4 3.2 55 228 7 0 0 4 S ISOMERASE aspartate racemase (pyrococcus horikoshii) 369: 3256-A 1ek9-A 2.4 4.1 61 428 8 0 0 4 S MEMBRANE PROTEIN outer membrane protein tolc (escheri 370: 3256-A 1eer-A 2.4 4.8 66 166 11 0 0 8 S COMPLEX (CYTOKINE/RECEPTOR) erythropoietin Mutant eryt 371: 3256-A 1e1d-A 2.4 3.4 63 553 3 0 0 4 S HYBRID CLUSTER hybrid cluster protein (prismane protei 372: 3256-A 1dvp-A 2.4 3.0 56 217 4 0 0 6 S TRANSFERASE hepatocyte growth factor-regulated tyrosin 373: 3256-A 2p06-A 2.3 4.7 56 79 9 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 374: 3256-A 2ojq-A 2.3 9.9 70 339 10 0 0 5 S APOPTOSIS programmed cell death 6-interacting protein 375: 3256-A 2ntx-A 2.3 3.6 56 300 14 0 0 4 S SIGNALING PROTEIN emb|cab41934.1 fragment (prone8) (a 376: 3256-A 2j69-A 2.3 3.4 74 671 5 0 0 5 S HYDROLASE bacterial dynamin-like protein (nostoc punc 377: 3256-A 2i68-A 2.3 3.2 45 78 2 0 0 6 S TRANSPORT PROTEIN protein emre (methyl viologen resist 378: 3256-A 2hsn-A 2.3 3.3 59 160 10 0 0 7 S LIGASE/RNA BINDING PROTEIN methionyl-trna synthetase, 379: 3256-A 2gsv-A 2.3 3.3 43 65 7 0 0 3 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 380: 3256-A 2ahm-A 2.3 4.0 46 77 13 0 0 4 S VIRUS/VIRAL PROTEIN/REPLICATION replicase polyprotein 381: 3256-A 1zk8-A 2.3 5.6 67 176 9 0 0 5 S TRANSCRIPTION REGULATOR transcriptional regulator, tet 382: 3256-A 1zbp-A 2.3 4.9 66 261 6 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 383: 3256-A 1wer 2.3 4.7 69 324 7 0 0 9 S GTPASE ACTIVATION p120gap fragment (gap-334, gapette) 384: 3256-A 1qhb-A 2.3 4.2 65 595 6 0 0 7 S OXIDOREDUCTASE haloperoxidase (corallina officinalis) 385: 3256-A 1oy6-A 2.3 8.8 85 1006 9 0 0 8 S MEMBRANE PROTEIN acriflavine resistance protein b (es 386: 3256-A 1nu7-D 2.3 9.2 62 282 11 0 0 5 S HYDROLASE/PROTEIN BINDING prothrombin fragment (alpha- 387: 3256-A 1ni9-A 2.3 7.0 70 291 9 0 0 6 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION protein glpx (e 388: 3256-A 1kdx-A 2.3 9.9 59 81 5 0 0 7 S TRANSCRIPTION REGULATION COMPLEX cbp fragment (creb-bi 389: 3256-A 1jb0-L 2.3 3.5 51 151 4 0 0 2 S PHOTOSYNTHESIS photosystem i p700 chlorophyll a apopr 390: 3256-A 1h77-A 2.3 4.6 65 561 5 0 0 7 S 391: 3256-A 1g7o-A 2.3 3.2 68 215 13 0 0 6 S OXIDOREDUCTASE glutaredoxin 2 (grx2) (escherichia co 392: 3256-A 1edu-A 2.3 2.9 64 149 2 0 0 6 S ENDOCYTOSIS/EXOCYTOSIS eh domain binding protein epsin 393: 3256-A 3mde-A 2.2 3.1 55 385 9 0 0 3 S OXIDOREDUCTASE Medium chain acyl-coa dehydrogenase (mc 394: 3256-A 2oh3-A 2.2 9.4 66 143 8 0 0 5 S METAL BINDING PROTEIN cog1633 (rubrerythrin) (magneto 395: 3256-A 2o7g-A 2.2 2.9 45 88 13 0 0 3 S TRANSCRIPTION probable RNA polymerase sigma-c factor f 396: 3256-A 2izp-A 2.2 4.4 81 272 7 0 0 8 S TOXIN putative membrane antigen (bipd) fragment (burk 397: 3256-A 2dfk-A 2.2 4.3 76 365 9 0 0 8 S CELL CYCLE collybistin ii fragment cell division cycle 398: 3256-A 2aka-A 2.2 5.2 59 764 14 0 0 5 S CONTRACTILE PROTEIN myosin ii heavy chain linker dynam 399: 3256-A 2acx-A 2.2 2.9 50 495 10 0 0 5 S TRANSFERASE g protein-coupled receptor kinase 6 (g pro 400: 3256-A 1xly-A 2.2 2.8 61 224 5 0 0 5 S RNA BINDING PROTEIN she2p (she2, ykl130c) Mutant (sac 401: 3256-A 1wp9-A 2.2 3.3 57 479 11 0 0 7 S HYDROLASE atp-dependent RNA helicase, putative fragmen 402: 3256-A 1wc0-A 2.2 3.8 66 198 6 0 0 6 S LYASE adenylate cyclase (soluble adenylyl cyclase cyac 403: 3256-A 1w09-A 2.2 4.9 51 92 4 0 0 2 S CHAPERONE alpha-hemoglobin stabilizing protein (erythr 404: 3256-A 1vdy-A 2.2 3.5 62 140 6 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 405: 3256-A 1v9v-A 2.2 3.7 66 114 9 0 0 9 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION kiaa0561 protein 406: 3256-A 1rw2-A 2.2 4.1 69 152 10 0 0 7 S DNA BINDING PROTEIN atp-dependent DNA helicase ii, 80 407: 3256-A 1pu1-A 2.2 5.3 47 91 9 0 0 2 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 408: 3256-A 1li5-A 2.2 2.8 58 386 5 0 0 6 S LIGASE cysteinyl-trna synthetase (cysteine--trna ligas 409: 3256-A 1l2f-A 2.2 6.0 48 340 15 0 0 2 S TRANSCRIPTION n utilization substance protein a (nusa) 410: 3256-A 1k87-A 2.2 4.4 63 514 10 0 0 8 S OXIDOREDUCTASE proline dehydrogenase fragment (puta) b 411: 3256-A 1g7d-A 2.2 6.3 61 106 7 0 0 5 S CHAPERONE endoplasmic reticulum protein erp29 fragment 412: 3256-A 1fwk-A 2.2 3.9 61 296 5 0 0 4 S TRANSFERASE homoserine kinase (hk) (methanococcus ja 413: 3256-A 2ozb-B 2.1 1.4 45 239 9 0 0 2 S RNA BINDING PROTEIN/RNA u4U6.U5 TRI-SNRNP 15.5 KDA PRO 414: 3256-A 2her-A 2.1 4.8 63 334 5 0 0 7 S TRANSFERASE farnesyl pyrophosphate synthase (fragment) 415: 3256-A 2hbk-A 2.1 3.8 46 390 11 0 0 8 S HYDROLASE, GENE REGULATION exosome complex exonuclease 416: 3256-A 2d3x-A 2.1 3.3 61 127 10 0 0 6 S 417: 3256-A 1t0q-B 2.1 11.1 76 322 3 0 0 5 S OXIDOREDUCTASE toluene, o-xylene monooxygenase oxygena 418: 3256-A 1sgm-A 2.1 4.1 62 184 6 0 0 7 S TRANSCRIPTION putative hth-type transcriptional regula 419: 3256-A 1od2-A 2.1 4.6 60 702 7 0 0 9 S LIGASE acetyl-coenzyme a carboxylase (acc) fragment ( 420: 3256-A 1ng1 2.1 9.0 71 294 4 0 0 5 S SIGNAL RECOGNITION signal sequence recognition protein 421: 3256-A 1mhy-D 2.1 8.1 72 510 7 0 0 6 S OXIDOREDUCTASE methane monooxygenase hydroxylase biolo 422: 3256-A 1ir6-A 2.1 2.0 43 385 7 0 0 3 S HYDROLASE exonuclease recj fragment (single-stranded D 423: 3256-A 1ah7 2.1 4.4 66 245 11 0 0 5 S HYDROLASE phospholipase c (phosphatidylcholine-hydroly
FATCAT analysis of N-terminal domain
Align 2GNX_.pdb 267 with 2gnxA.pdb 267
Twists 0 ini-len 264 ini-rmsd 0.00 opt-equ 267 opt-rmsd 0.00 chain-rmsd 0.00 Score 792.00 align-len 267 gaps 0 (0.00%)
P-value 0.00e+00 Afp-num 27193 Identity 100.00% Similarity 100.00%
Block 0 afp 33 score 792.00 rmsd 0.00 gap 0 (0.00%)
Chain 1: 123 PHLSEQLCFFVQARMEIADFYEKMYALSTQKFINTEELVSTLDTILRKYSPLESSFQLEVGVLSHLLKAQ
1111111111111111111111111111111111111111111111111111111111111111111111
Chain 2: 123 PHLSEQLCFFVQARMEIADFYEKMYALSTQKFINTEELVSTLDTILRKYSPLESSFQLEVGVLSHLLKAQ
Chain 1: 202 AQISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRPPHLFLWLMKLKTMLLAKFSFYFHEALSRQTTASEMK
1111111111111111111111111111111111111111111111111111111111111111111111
Chain 2: 202 AQISEWKFLPSLVTLHNAHTKLQSWGQTFEKQRPPHLFLWLMKLKTMLLAKFSFYFHEALSRQTTASEMK
Chain 1: 288 ALTAKANPDLFGKISSFIRKYDAANVSLIFDQYPAVVSLPSDRPVMHWPNVIMIMTDRASDLNSLEKVVH
1111111111111111111111111111111111111111111111111111111111111111111111
Chain 2: 288 ALTAKANPDLFGKISSFIRKYDAANVSLIFDQYPAVVSLPSDRPVMHWPNVIMIMTDRASDLNSLEKVVH
Chain 1: 384 FYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFISFLNELSLALKNPKVFASLK
111111111111111111111111111111111111111111111111111111111
Chain 2: 384 FYDDKVQSTYFLTRPEPHFTIVVIFESKKSERDSHFISFLNELSLALKNPKVFASLK
Align 2GNX_.pdb 267 with 2ijqA.pdb 145
Twists 0 ini-len 88 ini-rmsd 2.99 opt-equ 100 opt-rmsd 3.28 chain-rmsd 2.99 Score 190.41 align-len 119 gaps 19 (15.97%)
P-value 9.34e-05 Afp-num 16252 Identity 5.04% Similarity 16.81%
Block 0 afp 11 score 190.41 rmsd 2.99 gap 24 (0.21%)
Chain 1: 132 FVQARMEIADFYEKMYALSTQKFINTEELVSTLDTILRKYSPLESSFQLEVGVLSHLLKAQAQIS-EWKF
111111111111111111 111111111111111 11 1111111111111111111111 1111
Chain 2: 26 EHETLRRAVVHGVRLYNS-----GEFHESHDCFEDEWY-NYGRGNTESKFLHGMVQVAAGAYKHFDFEDD
Chain 1: 210 LPSLVTLHNAHTKLQSWGQTFEKQRPP---HLFLWLMKLKTMLLAKFSF
111111111111111111 11 1111111111111111111
Chain 2: 90 DGMRSLFRTSLQYFRGVP-------NDYYGVDLLDVRTTVTNALSDPSA
Align 2GNX_.pdb 267 with 2hr2A.pdb 156
Twists 2 ini-len 136 ini-rmsd 4.91 opt-equ 144 opt-rmsd 3.34 chain-rmsd 11.42 Score 274.78 align-len 193 gaps 49 (25.39%)
P-value 1.29e-04 Afp-num 19718 Identity 7.25% Similarity 15.54%
Block 0 afp 12 score 234.05 rmsd 3.38 gap 22 (0.19%)
Block 1 afp 2 score 45.37 rmsd 1.26 gap 0 (0.00%)
Block 2 afp 3 score 52.01 rmsd 2.86 gap 2 (0.08%)
Chain 1: 131 FFVQARMEIADFYEKMYALSTQKFI-NTEELVSTLDTILRKYSPLESSFQLEVGVLSHLLKAQAQISEWK
1111111111111111111 11111 11111111111111111 1 11111111111111111111111
Chain 2: 2 KPLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRS
Chain 1: 209 FLPSLVTLHNAHTKLQSWGQTFEKQRPPHLFLWLMKLKTMLLAKFSFYFHEALSRQTTASEMKALTAKAN
1111111111111111111 11111111111111111111 2
Chain 2: 72 FDEALHSADKALHYFNRRGELN---------QDEGKLWISAVYSRALALDG------------------L
Chain 1: 295 PDLFGKISSFIRKYDAANVSLIFDQYPAVVSLPSDRPVMHWPNVIMIMTDRAS
222222222222222 3333 33333333333333333333
Chain 2: 115 GRGAEAMPEFKKVVEM----------IEERKGETPGKERMMEVAIDRIAQLGA
Dali analysis of C-terminal domain
FSSP FAMILIES OF STRUCTURALLY SIMILAR PROTEINS, VERSION 1.0 (Apr 1 1995) CREATED Sun May 13 02:59:02 BST 2007 for dali on s041-002.ebi.ac.uk METHOD Dali ver. 2.0: Holm, L., Sander, C. (1993) J.Mol.Biol. 233,123-138 DATABASE 8997 protein chains PDBID 3257-A HEADER COMPND SOURCE AUTHOR SEQLENGTH 118 NALIGN 40 WARNING pairs with Z<2.0 are structurally dissimilar ## SUMMARY: PDB/chain identifiers and structural alignment statistics NR. STRID1 STRID2 Z RMSD LALI LSEQ2 %IDE REVERS PERMUT NFRAG TOPO PROTEIN 1: 3257-A 2gnx-A 24.3 0.0 118 280 100 0 0 1 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 2: 3257-A 1jmr-A 7.6 3.0 94 246 9 0 0 12 S 3: 3257-A 1j3w-A 7.5 2.9 91 134 13 0 0 7 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION giding protein-m 4: 3257-A 1f5m-B 6.8 2.9 95 177 9 0 0 10 S SIGNALING PROTEIN gaf (saccharomyces cerevisiae) yeas 5: 3257-A 1h3q-A 6.6 4.2 92 140 4 0 0 11 S TRANSPORT sedlin (sedl) (mus musculus) mouse S.B.Jan 6: 3257-A 3nul 6.3 3.4 93 130 5 0 0 11 S ACTIN-BINDING PROTEIN profilin i (arabidopsis thalian 7: 3257-A 1mc0-A 5.8 4.1 99 341 8 0 0 11 S HYDROLASE 3',5'-cyclic nucleotide phosphodiesterase 2a 8: 3257-A 2h28-A 5.4 2.8 75 106 8 0 0 10 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 9: 3257-A 2p7j-A 5.0 2.9 79 262 13 0 0 11 S TRANSCRIPTION putative sensory boxGGDEF FAMILY PROTEIN 10: 3257-A 2dmw-A 5.0 3.3 85 131 7 0 0 11 S MEMBRANE PROTEIN synaptobrevin-like 1 variant fragment 11: 3257-A 2avx-A 4.8 3.6 93 171 5 0 0 10 S TRANSCRIPTION regulatory protein sdia Mutant (escheri 12: 3257-A 2j3t-C 4.7 5.2 83 141 7 0 0 8 S PROTEIN TRANSPORT trafficking protein particle complex 13: 3257-A 2hj9-C 4.7 3.3 76 210 5 0 0 9 S SIGNALING PROTEIN autoinducer 2-binding periplasmic pr 14: 3257-A 2hje-A 4.6 3.0 75 210 5 0 0 9 S SIGNALING PROTEIN autoinducer 2 sensor kinasePHOSPHATA 15: 3257-A 2uv0-E 4.5 3.5 93 159 9 0 0 12 S TRANSCRIPTION transcriptional activator protein lasr ( 16: 3257-A 2grg-A 4.2 3.2 68 98 10 0 0 8 S STRUCTURAL GENOMICS, UNKNOWN FUNCTION hypothetical pro 17: 3257-A 1w5d-A 4.2 3.7 91 458 7 0 0 10 S HYDROLASE penicillin-binding protein (bacillus subtil 18: 3257-A 1oj5-A 4.2 2.8 68 105 3 0 0 7 S TRANSCRIPTIONAL COACTIVATOR steroid receptor coactivat 19: 3257-A 1e25-A 4.2 4.6 92 278 7 0 0 9 S HYDROLASE extended-spectrum beta-lactamase per-1 Muta 20: 3257-A 1mwr-A 3.8 4.0 103 609 9 0 0 13 S BIOSYNTHETIC PROTEIN penicillin-binding protein 2a (sa 21: 3257-A 2fh5-A 3.7 3.8 73 124 7 0 0 6 S TRANSPORT PROTEIN signal recognition particle receptor 22: 3257-A 2bg3-A 3.6 3.7 97 468 7 0 0 10 S 23: 3257-A 1ojg-A 3.6 3.4 76 135 9 0 0 7 S TRANSFERASE sensor protein dcus (dcus) fragment (esch 24: 3257-A 1fof-A 3.5 3.7 96 246 4 0 0 11 S HYDROLASE beta lactamase oxa-10 (oxa-10) (pseudomona 25: 3257-A 1yax-A 3.3 2.7 66 153 6 0 0 8 S TRANSFERASE, SIGNALING PROTEIN virulence sensor protei 26: 3257-A 1wa9-A 3.3 3.4 66 317 11 0 0 8 S CIRCADIAN RHYTHM period circadian protein (clock-6 pro 27: 3257-A 2c5w-B 3.0 3.7 93 385 3 0 0 10 S PEPTIDOGLYCAN SYNTHESIS penicillin-binding protein 1a 28: 3257-A 1gce-A 2.9 3.7 92 361 10 0 0 11 S HYDROLASE beta-lactamase (cephalosporinase) (enteroba 29: 3257-A 1gzt-A 2.5 2.9 52 114 8 0 0 7 S LECTIN fucose-specific lectin (hypothetical protein pa 30: 3257-A 1em2-A 2.5 4.0 71 214 7 0 0 7 S LIPID BINDING PROTEIN mln64 protein fragment Mutant ( 31: 3257-A 2c4i-A 2.4 2.9 64 242 11 0 0 10 S GLYCOPROTEIN avidin (gallus gallus) chicken V.P.Hyto 32: 3257-A 1fx3-B 2.3 3.8 67 149 7 0 0 8 S TRANSPORT PROTEIN protein-export protein secb (secb) 33: 3257-A 2iz3-A 2.2 2.5 44 94 5 0 0 5 S INHIBITOR beta-microseminoprotein (prostate secreted s 34: 3257-A 2oai-A 2.1 2.8 54 77 4 0 0 9 S TOXIN hemolysin fragment (xylella fastidiosa) bacteri 35: 3257-A 2o3b-B 2.1 2.8 58 135 7 0 0 5 S HYDROLASE/HYDROLASE INHIBITOR nuclease (endonuclease) 36: 3257-A 2gtd-A 2.1 3.6 67 248 9 0 0 8 S TRANSFERASE type iii pantothenate kinase (thermotoga 37: 3257-A 1z8k-A 2.1 3.0 65 173 5 0 0 8 S ISOMERASE at3g25770 protein (arabidopsis thaliana) th 38: 3257-A 1snt-A 2.1 3.5 51 352 4 0 0 6 S HYDROLASE sialidase 2 (neu2, cytosolic sialidase, n-ac 39: 3257-A 1pda 2.1 3.1 58 296 7 0 0 6 S LYASE(PORPHYRIN) Porphobilinogen deaminase (escherich 40: 3257-A 1g99-A 2.1 2.9 71 398 4 0 0 12 S TRANSFERASE acetate kinase (methanosarcina thermophi
